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Oryza sativa
cluster # 16142 cluster # 16142       Sequences # 29       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16142#0 length = 1417 sequences # 8  
consensus_16142#1 length = 1383 sequences # 11  
consensus_16142#2 length = 797 sequences # 10  

consensusID : consensus_16142#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1417
fasta sequence
                              [GCACACACTCGCTGTCGCCCTCGCCCCGACTCGACTCCGCCGCTCGCGCGGCGCCGGAGCCCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGCACTTCGGGAGGTCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACATCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCGTCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGCGCTACAAGTACGCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGATGGGCGTAATGTGGATGGGAGGAACATCATGGTGCAGTTTGCCAAGTATGGGCCCAATGCGGAGCCAATACGAAAAGGAAGGATCATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAAGGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCA-GGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGC-GCTAGCCCTCCTCTCAAGGGATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGAAAAAGAGACAAATGGAAAAGGTTCACCTCCTTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGTTTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTCTTCGTGGTTTCTAGATTGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGTGCCTTATTTT-GATACTGTCGTATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAGTAGAATGATATTGCACGGGATCGCCCATGATGGATGATGTTCTAGCTATTAGTCTTTGTTGTTGGTGTGATGCCCGCGATGGTGCAGCTGATGATTGTGGTGATGGCGCTGATGCTGATTATGGGCAGATCTTGGTATTGACACACTGATGTTGTTCACTAAAAAAAAG]

[+] EMBL AK103676             [GCACACACTCGCTGTCGCCCTCGCCCCGACTCGACTCCGCCGCTCGCGCGGCGCCGGAGCCCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGCACTTCGGGAGGTCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACATCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCGTCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGCGCTACAAGTACGCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGATGGGCGTAATGTGGATGGGAGGAACATCATGGTGCAGTTTGCCAAGTATGGGCCCAATGCGGAGCCAATACGAAAAGGAAGGATCATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAAGGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCA GGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGC GCTAGCCCTCCTCTCAAGGGATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGAAAAAGAGACAAATGGAAAAGGTTCACCTCCTTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGTTTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTCTTCGTGGTTTCTAGATTGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGTGCCTTATTTT GATACTGTCGTATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAGTAGAATGATATTGCACGGGATCGCCCATGATGG                                                                                                                                        ]
[+] EMBL CF323059             [GCACACACTCGCTGTCGCCCTCGCCCCGACTCGACTCCGCCGCTCGCGCGGCGCCGGAGCCCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGCACTTCGGGAGGTCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACATCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCGTCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGCGCTACAAGTACGCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGATGGGCGTAATGTGGATGGGAGGAACATCATGGTGCAGTTTGCCAAGTATGGGCCCAATGCGGAGCCAATACGAAAAGGAAGGATCATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAAGGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCAGGGGGCCGAAGTCGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF309216             [ CACACACTCGCTGTCGCCCTCGCCCCGACTCGACTCCGCCGCTCGCGCGGCGCCGGAGCCCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGCACTTCTGGAGGTCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACATCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCGTCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGCGCTACAAGTACGCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGGTGGGCGTAATGTGGATGGGAGGAACATCATGGTGCAGTTTGCCAAGTATGGGCCCAATGCGGAGCCAATACGAAAAGGAAGGATCATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAAGGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCAGGGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATANGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB644414             [                                                                                                                                                                                                                                                                                                                                                                                                             GCCCCATGCGGAGCCAATACGAAAAGGAAGGATCATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAAGGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCA GGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGC GCTAGCCCTCCTCTCAAGGGATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGAAAAAGAGACAAATGGAAAAGGTTCACCTCCTTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGTTTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTCTTCGTGGTTTCTAGATTGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGTGCCTTATTTT GATACTGTCGTATTAACTTGTGTTAAAACATTT                                                                                                                                                                                                                       ]
[-] EMBL CB645461             [                                                                                                                                                                                                                                                                                                                                                                                                                                              CATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAAGGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCA GGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGC GCTAGCCCTCCTCTCAAGGGATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGAAAAAGAGACAAATGGAAAAGGTTCACCTCCTTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGTTTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTCTTCGTGGTTTCTAGATTGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTAAGGCTTATTTT GATACTGTCGTATTAACTTGTGTTcctaaaagg                                                                                                                                                                                                                       ]
[-] EMBL CB663014             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGC GCTAGCCCTCCTCTCAAGGGATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGAAAAAGAGACAAATGGAAAAGGTTCACCTCCTTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGTTTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTCTTCGTGGTTTCTAGATTGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGTGCCTTATTTT GATACTGTCGTATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAGTAGAATGATATTGCACGGGATCGCCCATGATGGATGATGTTCTAGCTATTAGTCTTTGTTGTTGGTGTGATGCCCGCGATGGTGCAGCTGATGATTGTGGTGATGGCGCTGATGCTGATTATGGGCAGATCTTGGTATTGACACACTGATGTTGTTCACTAAAAAAAAG]
[+] EMBL BM421394             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CATTTCATAGT CATCGCCTACTCGGCACAGCAGCTA CCCTCCTCTCAAGGGATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGAAAAAGAGACAAATGGAAAAGGTTCACCTCCTTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGTTTGTTGATCCAGTGATGCTTAAGAAGAGTCTTC AATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTCTTCGTGGTTTCTAGATTGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGT CCTTATTTTGGATACTGTCGTATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAGTAGAATGATATTGCACGGGATCGCCCNTGATGGATGATGTTCTAGCTATTAaaaa                                                                                                                  ]
[+] EMBL AK063813             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTCTTCGTGGTTTCTAGATTGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGTGCCTTATTTT GATACTGTCGTATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAGTAGAATGATATTGCACGGGATCGCCCATGATGGATGATGTTCTAGCTATTAGTCTTTGTTGTTGGTGTGATGCCCGCGATGGTGCAGCTGATGATTGTGGTGATGGCGCTGATGCTGATTATGGGCAGATCTTGGTATTGACACACT                      ]


>consensus_16142#0 GCACACACTCGCTGTCGCCCTCGCCCCGACTCGACTCCGCCGCTCGCGCGGCGCCGGAGC CCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGC ACTTCGGGAGGTCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACA TCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCG TCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGC GCTACAAGTACGCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGATGGGCGTAATGTGG ATGGGAGGAACATCATGGTGCAGTTTGCCAAGTATGGGCCCAATGCGGAGCCAATACGAA AAGGAAGGATCATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAA GGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCAGGGGCCGAAGTCGCAGCAGAA GCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAA GCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTA GAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCA AAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTC GGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCTCAAGG GATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGAAAAAGAGACAAATGGAA AAGGTTCACCTCCTTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCC CAGGTAGTGATGACAAGGAATAAAGTTTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCA AATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGC TAGTTCTTCGTGGTTTCTAGATTGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTT GTATTTTCACCTCTATTGTGCCTTATTTTGATACTGTCGTATTAACTTGTGTTAAAACAT TTGTCATTTTCTAGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAGTAGAATGATATT GCACGGGATCGCCCATGATGGATGATGTTCTAGCTATTAGTCTTTGTTGTTGGTGTGATG CCCGCGATGGTGCAGCTGATGATTGTGGTGATGGCGCTGATGCTGATTATGGGCAGATCT TGGTATTGACACACTGATGTTGTTCACTAAAAAAAAG



consensusID : consensus_16142#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1383
fasta sequence
                              [CTGTCGCCCTCGCCCCGACTCGACTCCGCCGCTCGCGCGGCGCCGGAGCCCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGCACTTCGGGAGGTCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACATCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCGTCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGCGCTACAAGTACGCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGATGGGCGTAATGTGGATGGGAGGAACATCATGGTGCAGTTTGCCAAGTATGGGCCCAATGCGGAGCCAATACGAAAAGGAAGGATCATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAAGGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCAGGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCTCAA-GGGATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGAAAAAGAGACAAATGGAAAAGGTTCACCTCCTTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGTTTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTCTTCGTGGTTTCTAGATTGTATTTCCTGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAGTAGAATGATATTGCACGGGATCGCCCATGATGGATGATGTTCTAGCTATTAGTCTTTGTTGTTGGTGTGATGCCCGCGATGGTGCAGCTGATGATTGTGGTGATGGCGCTGATGCTGATTATGGGCAGATCTTGGTATTGACACACTGATGTTGTTCACTGCTGACAGAGTTCCTTGAATTGTTTTTGTTCAAAAGGTTACAAAGAAAATCATGAAGTTCCATATGGATCTCATGATTGGTAAAAAA]

[+] EMBL AK064030             [CTGTCGCCCTCGCCCCGACTCGACTCCGCCGCTCGCGCGGCGCCGGAGCCCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGCACTTCGGGAGGTCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACATCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCGTCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGCGCTACAAGTACGCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGATGGGCGTAATGTGGATGGGAGGAACATCATGGTGCAGTTTGCCAAGTATGGGCCCAATGCGGAGCCAATACGAAAAGGAAGGATCATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAAGGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCAGGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCTCAA GGGATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGAAAAAGAGACAAATGGAAAAGGTTCACCTCCTTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGTTTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTCTTCGTGGTTTCTAGATTGTATTTCCTGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAGTAGAATGATATTGCACGGGATCGCCCATGATGGATGATGTTCTAGCTATTAGTCTTTGTTGTTGGTGTGATGCCCGCGATGGTGCAGCTGATGATTGTGGTGATGGCGCTGATGCTGATTATGGGCAGATCTTGGTATTGACACACTGATGTTGTTCACTGCTGACAGAGTTCCTTGAATTGTTTTTGTTCAAAAGGTTACAAAGAAAATCATGAAGTTCCATATGGATCT                ]
[+] EMBL AU065745             [ TGTCGCCCTCNCCCCGACTCGANTCCGCCGCTCGCGCGNCNCNGGAGCCCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGCACTTCGGGAGGTCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACATCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCGTCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGCGCTACAAGTACGCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGATGGGCGTAATGTGGATGGGA GAACATCATGGTGCAGTTTCCNAAta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL OSS10675A            [   TCGCCCTCGACCCGACTCGACTCCNCCGCTCGCGCGGC NCGGAGCCCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGNTTCTCGCCATGTCGCACTTCGGGAGGTCGGGGCCGCCGGANATCCGCAACACCTTCTCGCTCCTCGTCCTCAACATCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCGTCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGCGCTACAAGTACGCTG AGAGGCGCAGAAGGNTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB666280             [     GCCCTCGCCCCGACTCGACTCCGCCGCTCGCGCGGCGCCGGAGCCCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGCACTTCGGGAGGTCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACATCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCGTCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGCGCTACAAGTACGCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGATGGGCGTAATGTGGATGGGAGGAACATCATGGTGCAGTTTGCCAAGTATGGGCCCAATGCGGAGCCAATACGAAAAGGAAGGATCATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAAGGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCAGGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCATGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCTCAg g                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB645460             [     GCCCTCTCCCCGACTCGACTCCGCCGCTCGCGCGGCGCCGGAGCCCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGCACTTCGGGAGGTCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACATCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCGTCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGCGCTACAAGTACGCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGATGGGCGTAATGTGGATGGGAGGAACATCATGGTGCAGTTTGCCAAGTATGGGCCCAATGCGGAGCCAATACGAAAAGGAAGGATCATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAAGGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCAGGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTCGGAGCCGCTCATTTCATAGTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB663013             [                 ACTCGACTCCGCCGCTCGCGCGGCGCCGGAGCCCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGCACTTCGGGAGGTCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACATCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCGTCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGCGCTACAAGTACGCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGATGGGCGTAATGTGGATGGGAGGAACATCATGGTGCAGTTTGCCAAGTATGGGCCCAATGCGGAGCCAATACGAAAAGGAAGGATCATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAAGGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCAGGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB654276             [                 ACTCGACTCCTCCGCTCGCGCGGCGCCGGAGCCCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGCACTTCGGGAGGTCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACATCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCGTCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGCGCTACAAGTACGCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGATGGGCGTAATGTGGATGGGAGGAACATCATGGTGCAGTTTGCCAAGTATGGGCCCAATGCGGAGCCAATACGAAAAGGAAGGATCATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAAGGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCAGGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB642432             [                 ACTCGCCTTTGCCGCTCGCGCGGCGCCGGAGCCCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGCACTTCGGGAGGTCGGGGCCGCCGGACGTCCGCGACACCTTCTCGCTCCTCGTCCTCAACATCAGCTTCCGTACCACAGCCGACGACCTCTTCCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB677189             [                                           CGGAGCCCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGCACTTCGGGAGGTCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACATCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCGTCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGCGCTACAAGTACGCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGATGGGCGTAATGTGGATGGGAGGAACATCATGGTGCAGTTTGCCAAGTATGGGCCCAATGCGGAGCCAATACGAAAAGGAAGGATCATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAAGGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCAGGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCTCAAGGGGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF322976             [                                                                    ACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGCACTTCGGGAGGTCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACATCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCGTCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGCGCTACAAGTACGCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGATGGGCGTAATGTGGATGGGAGGAACATCATGGTGCAGTTTGCCAAGTATGGGCCCAATGCGGAGCCAATACGAAAAGGAAGGATCATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAAGGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCAGGGGCCGAAGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BI805747             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTCTTCGTGGTTTCTAGATTGTATTTCCTGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAGTAGAATGATATTGCACGGGATCGCCCATGATGGATGATGTTCTAGCTATTAGTCTTTGTTGTTGGTGTGATGCCCGCGATGGTGCAGCTGATGATTGTGGTGATGGCGCTGATGCTGATTAT GGCAGATCTTGGTATTGACACACTGATGTTGTTCACTGCTGACAGAGTTCCTTGAATTGTTTTTGTTC AAAGGTTACCAAGAAAATCATGAAGTTCCATATGGATCTCATGATTGGTAAAAAA]


>consensus_16142#1 CTGTCGCCCTCGCCCCGACTCGACTCCGCCGCTCGCGCGGCGCCGGAGCCCTAAACCCTA GGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGCACTTCGGGAGG TCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACATCAGCTTCCGT ACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCGTCGACGTCTTC ATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGCGCTACAAGTAC GCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGATGGGCGTAATGTGGATGGGAGGAAC ATCATGGTGCAGTTTGCCAAGTATGGGCCCAATGCGGAGCCAATACGAAAAGGAAGGATC ATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAAGGCGAAGGCAC AGAGATGACCACAGAGATAGAGAACGCAGGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGG CATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGA AGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGAT GATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGC AGGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTCGGAGCCGCTCA TTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCTCAAGGGATCAACACCA CGCAGGAGCCCTGCTCGCAATGGAAGTCCTGAAAAAGAGACAAATGGAAAAGGTTCACCT CCTTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGAT GACAAGGAATAAAGTTTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAG AAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTCTTCGT GGTTTCTAGATTGTATTTCCTGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAGTAGA ATGATATTGCACGGGATCGCCCATGATGGATGATGTTCTAGCTATTAGTCTTTGTTGTTG GTGTGATGCCCGCGATGGTGCAGCTGATGATTGTGGTGATGGCGCTGATGCTGATTATGG GCAGATCTTGGTATTGACACACTGATGTTGTTCACTGCTGACAGAGTTCCTTGAATTGTT TTTGTTCAAAAGGTTACAAAGAAAATCATGAAGTTCCATATGGATCTCATGATTGGTAAA AAA



consensusID : consensus_16142#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 797
fasta sequence
                              [ACGCAGGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCA-GGAGCAGAAGCA-GGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCTCAAGGGATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGA--AAAAGAGACA-AAT-GGAAAAGGTTCA-CCTCC-TTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGT-TTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTC-TTCGTGGTTTCTAGAT-TGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGTGCCTTATTTTGATACTGTCGTATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAGTAGAATGATATTGCACGGGATCGCCCATGA------AAAAAAAAAAGGAGCCGCTTTCCCCATCTCCTC]

[-] EMBL CB654277             [ACGCAGGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCA GGAGCAGAAGCA GGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCTCAAGGGATCAACACCACGCAGGAGCCTTGCTCGCAATGGAAGTCCTGA  AAAAGAGACA AAT GGAAAAGGTTCA CCTCC TTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGT TTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTC TTCGTGGTTTCTAGAT TGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGTGCCTTATTTTGATACTGTCGTATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGGGTTGCTGTTTTTTAGTAGAATGATATTGCACGGGATCGCCAA  A      AAAAAAAAAAGGg                    ]
[-] EMBL CB644415             [ACGCAGGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCA GGAGCAGAAGCA GGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCTCAAGGGATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGA  AAAAGAGACA AAT GGAAAAGGTTCC CCTCC TTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGT TTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCCCCGAAGCAGATTCAAGGTTGCTAGTTC TTCGTGGTTTTTAGAT TGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCCCCTCTATTGTCCCTTATTTTGATACTGTCGTATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGGGTTGCTGTTTTTTAGTAGAATGATATTGCACG                                                    ]
[-] EMBL CB666281             [ACGCAGGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCA GGAGCAGAAGCA GGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCTCAAGGGATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGA  AAAAGAGACA AAT GGAAAAGGTTCA CCTCC TTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGT TTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTC TTCGTGGTTTCTAGAT TGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGTGCCTTATTTTGATACTGTCGTATTAACTTGTGTTAAAACATTTGTCATAGGCTAGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAaaaaga                                                                ]
[+] EMBL CB652806             [                                              GACAGGCATAGGGATCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCA GGAGCAGAAGCA GGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCTCAAGGGATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGA  AAAAGAGACA AAT GGAAAAGGTTCA CCTCC TTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGT TTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTC TTCGTGGTTTCTAGAT TGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGTGCCTTATTTTGATACTGTCGTATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAGTAGAATGATATTGCACGGGATCGCCCATGA      GAAAGCAACCCTAGCCGCTTTCCCCATCTCCTC]
[+] EMBL CB633636             [                                                                                                                                                               TGATAAGCGTAG      GAGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCA GGAGCAGAAGCA GGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCGCAAGGGATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGA  AAAAGAGACA AAT GGAAAAGGTTCA CCTCC TTCACGCAGTGTTTCACCGTCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGT TTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGACAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTC TTCGTGGTTTCTAGAT TGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGTGCCTTATTTTGATACTGTCGTATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGGGTTGCT                                                                              ]
[-] EMBL CF309217             [                                                                                                                                                                                  AGCAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCA GGAGCAGAAGCA GGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCTCAAGGGATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGA  AAAAGAGACA AAT GGAAAAGGTTCA CCTCC TTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGT TTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTC TTCGTGGTTTAAAAAT TGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGTGCCTTATTTTGATACTGTCGTATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAGTAaa                                                                 ]
[+] EMBL AU030584             [                                                                                                                                                                                                               AAGCAGGAGCNGGATTAAGAGCAGGAGC AAAGCAGAAGCA GGAGCANAAGCA GGAGTCGGAGCCGCTCATTTCATAGTGCATCCCCTACTCGGCACAGCGCTAGCCCTCCTCTCAAGGGATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGA  AAAAGAGACA AAT GGAAAAGGTTCA CCTCC TTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGT TTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTC TTCGTGGTTTCTAGAT TGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGTGCCTTATTTTGATACTGTCGTATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAGTAGAATGATATTGCACGGGATCGCCCATGATGGNTGAAAAAAAAAAaaa                    ]
[+] EMBL BI809316             [                                                                                                                                                                                                                                      GGACCAAACGCAGAA CACGGAGCAGAA CACGGAGTCGGA CCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCTCAAGGGATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGA  AAAAGAGACA AAT GGAAAAGGTTCA CCTCC TTCAC CAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGT TTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTC TTCGTGGTTTCTAGAT TGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGTGCCTTATTTTGATACTGTCGTATTAACTTGTGTTAAAACATTTGTCATTTTCTAaaaaaa                                                                                                  ]
[+] EMBL BQ907099             [                                                                                                                                                                                                                                                                                                                                                                          AAGTCCTGAGNAAGAGAGACAGAATGGGAAAAGGTTCAGCCTCCGTTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGTNTTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTCATTCGTGGTTTCTAGATCNGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGTGCCTTATTTTGATACTGTCGTATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAGTAGAATGATATTGCACGGGATCGCCAA  A      AAA                              ]
[+] EMBL AU032528             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGT TTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAANTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGCTAGTTC TTCGTGGTTTCTAGAT TGTATTTCCTGGTACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGTGCCTTATTTTGATACTGTCGTATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGGGTTGCTGTTTTCTAGTAGAATGATATTGCACGGGATCGCCCATGA      AAAAAAAAAA                       ]


>consensus_16142#2 ACGCAGGGGCCGAAGTCGCAGCAGAAGCAGAGAAAGGCATGGCCGTGACAGGGATAGGGA TCATCGTCGTCACAGCAGAAGCAGAAGCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTT AAGCCCAGACTACAAGAACCGTCGTAGAGGAAGAGATGATGATAAGCGTAGGAGCAAGAG CAAGAGCAAGAGCAAGAGCAGGAGCAAAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAG CAGAAGCAGGAGCAGAAGCAGGAGTCGGAGCCGCTCATTTCATAGTGCATCGCCTACTCG GCACAGCGCTAGCCCTCCTCTCAAGGGATCAACACCACGCAGGAGCCCTGCTCGCAATGG AAGTCCTGAAAAAGAGACAAATGGAAAAGGTTCACCTCCTTCACGCAGTGTTTCACCATC ACCACAGCGTGCTGGCTCCCGTAGCCCAGGTAGTGATGACAAGGAATAAAGTTTGTTGAT CCAGTGATGCTTAAGAAGAGTCTTCAAATTGGACTAGAAAAGTTTGGCTGAGCATGGGAG TAGCACCGAAGCAGATTCAAGGTTGCTAGTTCTTCGTGGTTTCTAGATTGTATTTCCTGG TACTGTCAGAATTATGTTGTCGGTTTGTATTTTCACCTCTATTGTGCCTTATTTTGATAC TGTCGTATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGGG TTGCTGTTTTCTAGTAGAATGATATTGCACGGGATCGCCCATGAAAAAAAAAAAGGAGCC GCTTTCCCCATCTCCTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16142#0      GCACACACTCGCTGTCGCCCTCGCCCCGACTCGACTCCGCCGCTCGCGCGGCGCCGGAGC 60
consensus_16142#2      ------------------------------------------------------------
consensus_16142#1      -----------CTGTCGCCCTCGCCCCGACTCGACTCCGCCGCTCGCGCGGCGCCGGAGC 49
                                                                                   

consensus_16142#0      CCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGC 120
consensus_16142#2      ------------------------------------------------------------
consensus_16142#1      CCTAAACCCTAGGTCTCCCACGCGGCGGCGGCGGCGGGCGGGGGTTTCTCGCCATGTCGC 109
                                                                                   

consensus_16142#0      ACTTCGGGAGGTCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACA 180
consensus_16142#2      ------------------------------------------------------------
consensus_16142#1      ACTTCGGGAGGTCGGGGCCGCCGGACATCCGCGACACCTTCTCGCTCCTCGTCCTCAACA 169
                                                                                   

consensus_16142#0      TCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCG 240
consensus_16142#2      ------------------------------------------------------------
consensus_16142#1      TCAGCTTCCGTACCACAGCCGACGACCTCTTCCCGCTCTTCGACCGCTACGGCAAGGTCG 229
                                                                                   

consensus_16142#0      TCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGC 300
consensus_16142#2      ------------------------------------------------------------
consensus_16142#1      TCGACGTCTTCATCCCGAGGGATCGGAGGACTGGGGACTCGAGGGGATTCGCGTTCGTGC 289
                                                                                   

consensus_16142#0      GCTACAAGTACGCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGATGGGCGTAATGTGG 360
consensus_16142#2      ------------------------------------------------------------
consensus_16142#1      GCTACAAGTACGCTGAAGAGGCGCAGAAGGCTATAGATCGGCTTGATGGGCGTAATGTGG 349
                                                                                   

consensus_16142#0      ATGGGAGGAACATCATGGTGCAGTTTGCCAAGTATGGGCCCAATGCGGAGCCAATACGAA 420
consensus_16142#2      ------------------------------------------------------------
consensus_16142#1      ATGGGAGGAACATCATGGTGCAGTTTGCCAAGTATGGGCCCAATGCGGAGCCAATACGAA 409
                                                                                   

consensus_16142#0      AAGGAAGGATCATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAA 480
consensus_16142#2      ------------------------------------------------------------
consensus_16142#1      AAGGAAGGATCATAGAAGAGGTTGAGAAATCACGGGACAGGTCAAGAAGCCGTAGCCCAA 469
                                                                                   

consensus_16142#0      GGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCAGGGGCCGAAGTCGCAGCAGAA 540
consensus_16142#2      ----------------------------------ACGCAGGGGCCGAAGTCGCAGCAGAA 26
consensus_16142#1      GGCGAAGGCACAGAGATGACCACAGAGATAGAGAACGCAGGGGCCGAAGTCGCAGCAGAA 529
                                                         **************************

consensus_16142#0      GCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAA 600
consensus_16142#2      GCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAA 86
consensus_16142#1      GCAGAGAAAGGCATGGCCGTGACAGGGATAGGGATCATCGTCGTCACAGCAGAAGCAGAA 589
                       ************************************************************

consensus_16142#0      GCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTA 660
consensus_16142#2      GCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTA 146
consensus_16142#1      GCAGAAGCAGAAGCCGAAGCCGAAGCCGAAGCTTAAGCCCAGACTACAAGAACCGTCGTA 649
                       ************************************************************

consensus_16142#0      GAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCA 720
consensus_16142#2      GAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCA 206
consensus_16142#1      GAGGAAGAGATGATGATAAGCGTAGGAGCAAGAGCAAGAGCAAGAGCAAGAGCAGGAGCA 709
                       ************************************************************

consensus_16142#0      AAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTC 780
consensus_16142#2      AAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTC 266
consensus_16142#1      AAAGCAGGAGCAGGAGTAAGAGCAGGAGCAAAAGCAGAAGCAGGAGCAGAAGCAGGAGTC 769
                       ************************************************************

consensus_16142#0      GGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCTCAAGG 840
consensus_16142#2      GGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCTCAAGG 326
consensus_16142#1      GGAGCCGCTCATTTCATAGTGCATCGCCTACTCGGCACAGCGCTAGCCCTCCTCTCAAGG 829
                       ************************************************************

consensus_16142#0      GATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGAAAAAGAGACAAATGGAA 900
consensus_16142#2      GATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGAAAAAGAGACAAATGGAA 386
consensus_16142#1      GATCAACACCACGCAGGAGCCCTGCTCGCAATGGAAGTCCTGAAAAAGAGACAAATGGAA 889
                       ************************************************************

consensus_16142#0      AAGGTTCACCTCCTTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCC 960
consensus_16142#2      AAGGTTCACCTCCTTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCC 446
consensus_16142#1      AAGGTTCACCTCCTTCACGCAGTGTTTCACCATCACCACAGCGTGCTGGCTCCCGTAGCC 949
                       ************************************************************

consensus_16142#0      CAGGTAGTGATGACAAGGAATAAAGTTTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCA 1020
consensus_16142#2      CAGGTAGTGATGACAAGGAATAAAGTTTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCA 506
consensus_16142#1      CAGGTAGTGATGACAAGGAATAAAGTTTGTTGATCCAGTGATGCTTAAGAAGAGTCTTCA 1009
                       ************************************************************

consensus_16142#0      AATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGC 1080
consensus_16142#2      AATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGC 566
consensus_16142#1      AATTGGACTAGAAAAGTTTGGCTGAGCATGGGAGTAGCACCGAAGCAGATTCAAGGTTGC 1069
                       ************************************************************

consensus_16142#0      TAGTTCTTCGTGGTTTCTAGATTGTATTTCCTGGTA-CTGTCAG--AATTATGTTGTCGG 1137
consensus_16142#2      TAGTTCTTCGTGGTTTCTAGATTGTATTTCCTGGTA-CTGTCAG--AATTATGTTGTCGG 623
consensus_16142#1      TAGTTCTTCGTGGTTTCTAGATTGTATTTCCTGTTATCTGTTCGTGAGACGGGTTGCTGT 1129
                       ********************************* ** ****  *  *     ****  * 

consensus_16142#0      TTTGTATT----------TTCACC------TCTATTGTGCCTTATTTTGATACTGTC-GT 1180
consensus_16142#2      TTTGTATT----------TTCACC------TCTATTGTGCCTTATTTTGATACTGTC-GT 666
consensus_16142#1      TTTCTAGTAGAATGATATTGCACGGGATCGCCCATGATGGATGATGTTCTAGCTATTAGT 1189
                       *** ** *          * ***        * **  **  * ** **    ** *  **

consensus_16142#0      ATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGG----GTT 1236
consensus_16142#2      ATTAACTTGTGTTAAAACATTTGTCATTTTCTAGTTATCTGTTCGTGAGACGG----GTT 722
consensus_16142#1      CTTTGTTGTTGGTGTGATGCCCGCGATGGTGCAGCTGATGATTGTGGTGATGGCGCTGAT 1249
                        **   *  ** *   *     *  **  *  ** *     **   * ** **    * *

consensus_16142#0      GCTGTTTTCTAGTAGAA--TGATATTG-CACGGGATCGCCCATGATGGATGATGTTCTAG 1293
consensus_16142#2      GCTGTTTTCTAGTAGAA--TGATATTG-CACGGGATCGCCCATGAAAAAAAAAAAGGAGC 779
consensus_16142#1      GCTGATTATGGGCAGATCTTGGTATTGACACACTGATGTTGTTCACTGCTGACAGAGTTC 1309
                       **** **    * ***   ** ***** ***      *    * *      *        

consensus_16142#0      CTATTAGTCTTTGTTGTTGGTGTGATGCCCGCGATGGTGCAGCTGATGATTGTGGTGATG 1353
consensus_16142#2      CGCTTTCCCCATCTCCTC------------------------------------------ 797
consensus_16142#1      CTTGAATTGTTTTTGTTCAAAAGGTTACAAAGAAAATCATGAAGTTCCATATGGATCTCA 1369
                       *          * *  *                                           

consensus_16142#0      GCGCTGATGCTGATTATGGGCAGATCTTGGTATTGACACACTGATGTTGTTCACTAAAAA 1413
consensus_16142#2      ------------------------------------------------------------
consensus_16142#1      TGATTGGTAAAAAA---------------------------------------------- 1383
                                                                                   

consensus_16142#0      AAAG 1417
consensus_16142#2      ----
consensus_16142#1      ----
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)