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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16152#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 28 consensus length = 1304 fasta sequence
[TCGAAAAGAATTTCGAAGCTTAGCCGAAGATGCCAATGGAGAGGTCGGTGTCGTGCGCCGAGAGGCCACCGGCGGCGTTCGGCGGCGGCGCGGCCGCGGACCTGCGGTGCTACAGCGCGTCGTACGCCACGTCGTACAAGCCGGGCGCTGGCGCGGCAGCGGGGGCGGCGGCGGGGGCGGGGACGAACACGACGACGAAGGTGATGAAGCGCGCCACGAGCGCCAACGCGTGGTCGCGGCCGGGCGGCGGTGGCGGCGTGCAGCGGAGCG-GGAGCACCAAGACGGTGGCGTCCTCCGCCGCCGGGTGGGGCCGCGGCGGCGGCGGGCCGACGCCCGGGTTCAACCTGCGGAGCTACAGCGCGTCGTACGCCGCGTCGTACTCGCCGTTCGAGGACCCGAGTCCGGCGGAGAAGACCGGCGGCGGGGGCGGTGGCGCGGCGACGTGGGCGTCGTCGGCGGGGCGGCGGTCGGTGAACCTGAGAGGGTACACGCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA-AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG-AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT-AGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGA-GGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGCAAAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGCTTGTTGTTGTACATACTTGTATGAGTATTATTATATCTCTGTACCCAGTTTACTGTAGTAGAATAAGATTTTGGAGGTGTGAGATGTAAATAA-AATA-CATATATACTACACATATATATTACTTGAGCTTAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF196340 [TCGAAAAGAATTTCAAAGCTTAGCCGAAGATGCCAATGGAGAGGTCGGTGTCGTGCGCCGAGAGGCCACCGGCGGCGTTCGGCGGCGGCGCAGCCGCGGACCTGCGGTGCTACAGCGCGTCGTACGCCACGTCGTACAAGCCGGGCGCT ]
[+] EMBL CB655983 [ AATTTCGAAGCTTAGCCGAAGATGCCAATGGAGAGGTCGGTGTCGTGCGCCGAGAGGCCACCGGCGGCGTTCGGCGGCGGCGCGGCCGCGGACCTGCGGTGCTACAGCGCGTCGTACGCCACGTCGTACAAGCCGGGCGCTGGCGCGGCAGCGGGGGCGGCGGCGGGGGCGGGGACGAACACGACGACGAAGGTGATGAAGCGCGCCACGAGCGCCAACGCGTGGTCGCGGCCGGGCGGCGGTGGCGGCGTGCAGCGGAGCG GGAGCACCAAGACGGTGGCGTCCTCCGCCGCCGGGTGGGGCCGCGGCGGCGGCGGGCCGACGCCCGGGTTCAACCTGCGGAGCTACAGCGCGTCGTACGCCGCGTCGTACTCGCCGTTCGAGGACCCGAGTCCGGCGGAGAAGACCGGCGGCGGGGGCGGTGGCGCGGCGACGTGGGCGTCGTCGGCGGGGCGGCGGTCGGTGAACCTGAGAGGGTACACGCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTC ]
[+] EMBL CB649648 [ TTCGAAGCTTAGCCGAAGATGCCAATGGAGAGGTCGGTGTCGTGCGCCGAGAGGCCACCGGCGGCGTTCGGCGGCGGCGCGGCCGCGGACCTGCGGTGCTACAGCGCGTCGTACGCCACGTCGTACAAGCCGGGCGCTGGCGCGGCAGCGGGGGCGGCGGCGGGGGCGGGGACGAACACGACGACGAAGGTGATGAAGCGCGCCACGAGCGCCAACGCGTGGTCGCGGCCGGGCGGCGGTGGCGGCGTGCAGCGGAGCG GGAGCACCAAGACGGTGGCGTCCTCCGCCGCCGGGTGGGGCCGCGGCGGCGGCGGGCCGACGCCCGGGTTCAACCTGCGGAGCTACAGCGCGTCGTACGCCGCGTCGTACTCGCCGTTCGAGGACCCGAGTCCGGCGGAGAAGACCGGCGGCGGGGGCGGTGGCGCGGCGACGTGGGCGTCGTCGGCGGGGCGGCGGTCGGTGAACCTGAGAGGGTACACGCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT AGCTCCTCTTCGTCGTCATC ]
[+] EMBL CB653663 [ CGAAGCTTAGCCGAAGATGCCAATGGAGAGGTCGGTGTCGTGCGCCGAGAGGCCACCGGCGGCGTTCGGCGGCGGCGCGGCCGCGGACCTGCGGTGCTACAGCGCGTCGTACGCCACGTCGTACAAGCCGGGCGCTGGCGCGGCAGCGGGGGCGGCGGCGGGGGCGGGGACGAACACGACGACGAAGGTGATGAAGCGCGCCACGAGCGCCAACGCGTGGTCGCGGCCGGGCGGCGGTGGCGGCGTGCAGCGGAGCG GGAGCACCAAGACGGTGGCGTCCTCCGCCGCCGGGTGGGGCCGCGGCGGCGGCGGGCCGACGCCCGGGTTCAACCTGCGGAGCTACAGCGCGTCGTACGCCGCGTCGTACTCGCCGTTCGAGGACCCGAGTCCGGCGGAGAAGACCGGCGGCGGGGGCGGTGGCGCGGCGACGTGGGCGTCGTCGGCGGGGCGGCGGTCGGTGAACCTGAGAGGGTACACGCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAG ]
[+] EMBL CB683232 [ GAAGCTTAGCCGAAGATGCCAATGGAGAGGTCGGTGTCGTGCGCCGAGAGGCCACCGGCGGCGTTCGGCGGCGGCGCGGCCGCGGACCTGCGGTGCTACAGCGCGTCGTACGCCACGTCGTACAAGCCGGGCGCTGGCGCGGCAGCGGGGGCGGCGGCGGGGGCGGGGACGAACACGACGACGAAGGTGATGAAGCGCGCCACGAGCGCCAACGCGTGGTCGCGGCCGGGCGGCGGTGGCGGCGTGCAGCGGAGCG GGAGCACCAAGACGGTGGCGTCCTCCGCCGCCGGGTGGGGCCGCGGCGGCGGCGGGCCGACGCCCGGGTTCAACCTGCGGAGCTACAGCGCGTCGTACGCCGCGTCGTACTCGCCGTTCGAGGACCCGAGTCCGGCGGAGAAGACCGGCGGCGGGGGCGGTGGCGCGGCGACGTGGGCGTCGTCGGCGGGGCGGCGGTCGGTGAACCTGAGAGGGTACACGCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT AGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTG ]
[+] EMBL CB680599 [ AAGCTTACTTTAAGATGCCAATGGAGAGGTCGGTGTCGTGCGCCGAGAGGCCACCGGCGGCGTTCGGCGGCGGCGCGGCCGCGGACCTGCGGTGCTACAGCGCGTCGTACGCCACGTCGTACAAGCCGGGCGCTGGCGCGGCAGCGGGGGCGGCGGCGGGGGCGGGGACGAACACTACGACGAATGTGATGAAGCGCGCCACGAGCGCCAACGCGTGGTCGCGGCCGGGCGGCGGTGGCGGCGTGCAGCGGAGCG GGAGCACCAAGACGGTGGCGTCCTCCGCCGCCGGGTGGGGCCGCGGCGGCGGCGGGCCGACGCCCGGGTTCATTTTGCTGAGCTACAGCGCGTCGTACGCCGCGTCTTACTCGCCGTTCGAGGACCCAAGTCCGGCGGAGAAGACCGGCTGCGGGGGCGGTGGCGCGGCGACGTGGGCATCGTCAGCGGGGCAGAGGTCGGTGAACCTGAGATGGTACACTCCGTCGTTCGCGGCATTGGACGACAC ]
[+] EMBL CB626633 [ AAGCTTAGCCGAAGATGCCAATGGAGAGGTCGGTGTCGTGCGCCGAGAGGCCACCGGCGGCGTTCGGCGGCGGCGCGGCCGCGGACCTGCGGTGCTACAGCGCGTCGTACGCCACGTCGTACAAGCCGGGCGCTGGCGCGGCAGCGGGGGCGGCGGCGGGGGCGGGGACGAACACGACGACGAAGGTGATGAAGCGCGCCACGAGCGCCAACGCGTGGTCGCGGCCGGGCGGCGGTGGCGGCGTGCAGCGGAGCG GGAGCACCAAGACGGTGGCGTCCTCCGCCGCCGGGTGGGGCCGCGGCGGCGGCGGGCCGACGCCCGGGTTCAACCTGCGGAGCTACAGCGCGTCGTACGCCGCGTCGTACTCGCCGTTCGAGGACCCGAGTCCGGCGGAGAAGACCGGCGGCGGGGGCGGTGGCGCGGCGACGTGGGCGTCGTCGGCGGGGCGGCGGTCGGTGAACCTGAGAGGGTACACGCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCCCCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT AGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGNTGATTGCTACCTT ]
[+] EMBL CB683848 [ AGCTTATCCGAAGATGCCAATGGAGAGGTCGGTGTCGTGCGCCGAGAGGCCACCGGCGGCGTTCGGCGGCGGCGCGGCCGCGGACCTGCGGTGCTACAGCGCGTCGTACGCCACGTCGTACAAGCCGGGCGCTGGCGCGGCAGCGGGGGCGGCGGCGGGGGCGGGGACGAACACGACGACGAAGGTGATGAAGCGCGCCACGAGCGCCAACGCGTGGTCGCGGCCGGGCGGCGGTGGCGGCGTGCAGCGGAGCG GGAGCACCAAGACGGTGGCGTCCTCCGCCGCCGGGTGGGGCCGCGGCGGCGGCGGGCCGACGCCCGGGTTCAACCTGCGGAGCTACAGCGCGTCGTACGCCGCGTCGTACTCGCCGTTCGAGGACCCGAGTCCGGCGGAGAAGACCGGCGGCGGGGGCGGTGGCGCGGCGACGTGGGCGTCGTCGGCGGGGCGGCGGTCGGTGAACCTGATAGGGTACACGCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCATGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAATGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT AGCTC ]
[+] EMBL CB656920 [ AGCTTATCCGAAGATGCCAATGGAGAGGTCGGTGTCGTGCGCCGAGAGGCCACCGGCGGCGTTCGGCGGCGGCGCGGCCGCGGACCTGCGGTGCTACAGCGCGTCGTACGCCACGTCGTACAAGCCGGGCGCTGGCGCGGCAGCGGGGGCGGCGGCGGGGGCGGGGACGAACACGACGACGAAGGTGATGAAGCGCGCCACGAGCGCCAACGCGTGGTCGCGGCCGGGCGGCGGTGGCGGCGTGCAGCGGAGCG GGAGCACCAAGACGGTGGCGTCCTCCGCCGCCGGGTGGGGCCGCGGCGGCGGCGGGCCGACGCCCGGGTTCAACCTGCGGAGCTACAGCGCGTCGTACGCCGCGTCGTACTCGCCGTTCGAGGACCCGAGTCCGGCGGAGAAGACCGGCGGCGGGGGCGGTGGCGCGGCGACGTGGGCGTCGTCGGCGGGGCGGCGGTCGGTGAACCTGAGAGGGTACACGCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT AGCTCCTCTTCGTCGTCATCTTTC ]
[+] EMBL CF324973 [ GCGCCACGAGCGCCAACGCGTGGTCGCGGCCGGGCGGCGGTGGCGGCGTGCAGCGGAGCG GGAGCACCAAGACGGTGGCGTCCTCCGCCGCCGGGTGGGGCCGCGGCGGCGGCGGGCCGACGCCCG ]
[+] EMBL C72094 [ GAGCG CAACGCNTGGTCGCGGCCGGGCGGCGGTGGCGGCGTGCAGCGGA CGTAGAGCACCAAGACGGTGGCGTCCTCCGCCGCCGGGTGGGGCCGCGGCGGC GCGGGCCGACG CCGGTTTCAACCTGCGGA NTACAGCNCNTCGTACGCCGCTTCGTACTCGCCGTTCGAGGACCCGATTCCGGCGGAGAAGACCGGCGGCGGGGGCGGTNGCGCGGCGACGTGGGCTTCGTCGGCGGGGCGGCGGTCGGTGAACCTAAGAGGGTACACGCCGTCTTTCGCGGCATTNGACGACAACGCCGTGGCGNCGCCGATCCCGGCCAAG ]
[+] EMBL CB642469 [ AGCG GGAGCACCAAGACGGTGGCGTCCTCCGCCGCCGGGTGGGGCCGCGGCGGCGGCGGGCCGACGCCCGGGTTCAACCTGCGGAGCTACAGCGCGTCGTACGCCGCGTCGTACTCGCCGTTCGAGGACCCGAGTCCGGCGGAGAAGACCGGCGGCGGGGGCGGTGGCGCGGCGACGTGGGCGTCGTCGGCGGGGCGGCGGTCGGTGAACCTGAGAGGGTACACGCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT AGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGA GGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGCAAAAAATCCAA ]
[-] EMBL CB653664 [ GAAGACCGGCGGCGGGGGCGGTGGCGCGGCGACGTGGGCGTCGTCGGCGGGGCGGCGGTCGGTGAACCTGAGAGGGTACACGCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT AGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGA GGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGCAAAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGCTTGTTGTTGTACATACTTGTATGAGTATTATTATATCTCTGTACCCAGTTTACTGTAGTAGAATAAGATTTTGGAGGTGTGAGATGTAAAT ]
[-] EMBL CB656921 [ GGCGCGGCGACGTGGGCGTCGTCGGCGGGGCGGCGGTCGGTGAACCTGAGAGGGTACACGCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT AGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGA GGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGCAAAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGCTTGTTGTTGTACATACTTGTATGAGTATTATTATATCTCTGTACCCAGTTTACTGTAGTAGAATAAGATTTTGGAGGTGTGAGATGTAAATAA AATA CATATATACTACACATATAaaaaaaaga ]
[-] EMBL CB649649 [ GGCGGTCGGTGAACCTGAGAGGGTACACGCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT AGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGA GGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGCAAAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGCTTGTTGTTGTACATACTTGTATGAGTATTATTATATCTCTGTACCCAGTTTTCTGTAGTAGAATAAGATTTTGGAGGTGTGAGATGTAAATAA AATA CATATATACTACAaaaaaaaga ]
[-] EMBL CB655466 [ GGTGAACCTGAGAGGGTACACGCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT AGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGA GGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGCAAAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGCTTGTTGTTGTACATACTTGTATGAGTATTATTATATCTCTGTACCCAGTTTACTGTAGTAGAATAAGATTTTGGAGGTGTGAGATGTAAATAA AATA CGTATATACTACACATATATATTACTTGAGCTTAAATAAAAAG ]
[-] EMBL CB680600 [ GAGAGGGTACACGCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT AGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGA GGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGGTGCAGAGCAAAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGCTTGTTGTTGTACATCCTTGTATGAGTATTATTATATCTCTGTACCCAGCTTACTGTAGTAGAATAAGATTTTGGACGTGTGAGATGTAAATAA AATA CATATATTCTCCTCATATATATTACTTGAaaaaaggga ]
[-] EMBL CB655984 [ GCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT AGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGA GGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGCAAAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGCTTGTTGTTGTACATACTTGTATGAGTATTATTATATCTCTGTACCCAGTTTACTGTAGTAGAATAAGATTTTGGAGGTGTGAGATGTAAATAA AATA CATATATACTACACATATA ]
[-] EMBL CB683463 [ GCCGTCGTTCGCGGCATTGGACGACACCGCGGTGGCGCCGCCGATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT AGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGA GGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGCAAAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGCTTGTTGTTGTACATACTTGTATGAGTATTATTATATCTCTGTACCCAGTTTACTGTAGTAGAATAAGATTTTGGAGGTGTGAGATGTAAATAA AATA CATATATACTACACACATAaaaaaaagg ]
[-] EMBL CB626634 [ CACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCCCCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT AGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGA GGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGCAAAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGCTTGTTGTTGTACATACTTGTATGAGTATTATTATATTTCTGTACCCAGTTTACTGTAGTAGAATAAGATTTTGGAGGTGTGAGATGTAAATAA AGTACCATATATACTAC ]
[+] EMBL AA752959 [ ATCCCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCCCCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT A CTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGA AATTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGA NGAGATACATATGANCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAACAAAAAATCCNAGGAAAAGTTGATCAGTGTGTGGTGTGCTTGTTGTTGTACATACTTGTATGAATATTATTATATCTCTGTACCCAGTT ]
[-] EMBL CB683644 [ AGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT AGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGA GGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGCAAAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGCTTGTTGTTGTACATACTTGTATGAGTATTATTATATCTCTGTACCCAGTTTACTGTAGTAGAATAAGATTTTGGAGGTGTGAGATGTAAATAAGGATA CATATATACTACACATATATATTACTTGA AAAAAAAga ]
[-] EMBL CB642470 [ AGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTTGTTGACGACGCCGAGCTCCAGCGGCGGA AGCGGCTGGTCGCCTACAAGGCGTACGACGTGG AAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTTTCCCTCTCACCCTCTCTTTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCT AGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGA GGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGCAAAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGCTTGTTGTTGTACATACTTGTAGGAGTATTATTATATCTCGGTACCCAGTTTGCTGTAGTAGAATAAGAT ]
[+] EMBL OSAA31864 [ AGCGGCGGATAGCGGCTGGTCGCCTACAAGGCGTACGACGTGGAAAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAATTGGATTAAGGGCAAGTGCTCCCGCGCCGTCAACGGCAAGTGGTGATCTCTCCCTCTCCCCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGA ]
[+] EMBL C73227 [ GCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTNCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTNACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGGTAAGCTCCTCTTCGTNGTCATCTTTCTTGCTCTTGGGTGTGTTTNAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTNACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTNACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGAGGGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGANAAAAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGC ]
[+] EMBL BE228394 [ gaGCACACCTTCATTCGATTTGTNACTCCTTCTTGTTTCCTTCTTGGATATNAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCANTATGA GGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGCAAAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGCTTGTTGTTGTACATACTTGTATGANTATTATNATATCTCTGTACCCANTTTACTGTAGTAGAATAANATTTTGGAGGTGTGAGATGTAAATAA AATA CATATA ]
[-] EMBL OSAA31775 [ TTCAGTATGA GGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGC AAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGCTTGTTGTTGTACATACTTGTATGAGTATTATTATATCTCTGTACCCAGTTTACTGTAGTAGAATAAGATTTTGGAGGTGTGAGATGTAAATAA AATA CATATATACTACACATATATATTACT ]
[+] EMBL CF338144 [ ACCCAGTTTACTGTAGTAGAATAAGATTTTGGAGGTGTGAGATGTAAATAA AATA CATATATACTACACATATATATTACTTGAGCTTCANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_16152#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 485 fasta sequence
[ANGANCCGGTTCGANCGCCGATCCCGGCCAACCAAGCAGGTGTCGCCGACGGGTNGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCNNCGGCGGAANCGGCTGGTCGCCTACAAGGCGTNCGACGTGGAAGGGAAGGTGAANGACTCNGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCCCCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCTANCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGANTCACCNTTNATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTNGGATATTAAGATTTTAATTTTGACNANATTTGGTCTGCATATAGCTACTGCAGCCATGTANTTACTACTACTACTTANTNTAA]
[+] EMBL AA753062 [ANGANCCGGTTCGANCGCCGATCCCGGCCAACCAAGCAGGTGTCGCCGACGGGTNGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCNNCGGCGGAANCGGCTGGTCGCCTACAAGGCGTNCGACGTGGAAGGGAAGGTGAANGACTCNGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCCCCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCTANCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGANTCACCNTTNATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTNGGATATTAAGATTTTAATTTTGACNANATTTGGTCTGCATATAGCTACTGCAGCCATGTANTTACTACTACTACTTANTNTAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16152#0 TCGAAAAGAATTTCGAAGCTTAGCCGAAGATGCCAATGGAGAGGTCGGTGTCGTGCGCCG 60
consensus_16152#1 ------------------------------------------------------------
consensus_16152#0 AGAGGCCACCGGCGGCGTTCGGCGGCGGCGCGGCCGCGGACCTGCGGTGCTACAGCGCGT 120
consensus_16152#1 ------------------------------------------------------------
consensus_16152#0 CGTACGCCACGTCGTACAAGCCGGGCGCTGGCGCGGCAGCGGGGGCGGCGGCGGGGGCGG 180
consensus_16152#1 ------------------------------------------------------------
consensus_16152#0 GGACGAACACGACGACGAAGGTGATGAAGCGCGCCACGAGCGCCAACGCGTGGTCGCGGC 240
consensus_16152#1 ------------------------------------------------------------
consensus_16152#0 CGGGCGGCGGTGGCGGCGTGCAGCGGAGCGGGAGCACCAAGACGGTGGCGTCCTCCGCCG 300
consensus_16152#1 ------------------------------------------------------------
consensus_16152#0 CCGGGTGGGGCCGCGGCGGCGGCGGGCCGACGCCCGGGTTCAACCTGCGGAGCTACAGCG 360
consensus_16152#1 ------------------------------------------------------------
consensus_16152#0 CGTCGTACGCCGCGTCGTACTCGCCGTTCGAGGACCCGAGTCCGGCGGAGAAGACCGGCG 420
consensus_16152#1 ------------------------------------------------------------
consensus_16152#0 GCGGGGGCGGTGGCGCGGCGACGTGGGCGTCGTCGGCGGGGCGGCGGTCGGTGAACCTGA 480
consensus_16152#1 ------------------------------------------------------------
consensus_16152#0 GAGGGTACACGCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGG 540
consensus_16152#1 ---------------------------------ANGANCCGGTTCGANCGCCGATCCCGG 27
* * ** ************
consensus_16152#0 CCAAG-AAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAG 599
consensus_16152#1 CCAACCAAGCAGGTGTCGCCGACGGGTNGCTTCGCCGGCGCCGTCGTCGACGACGCCGAG 87
**** ******************** ********************************
consensus_16152#0 CTCCAGCGGCGGAAGCGGCTGGTCGCCTACAAGGCGTACGACGTGGAAGGGAAGGTGAAG 659
consensus_16152#1 CTCCNNCGGCGGAANCGGCTGGTCGCCTACAAGGCGTNCGACGTGGAAGGGAAGGTGAAN 147
**** ******** ********************** *********************
consensus_16152#0 GACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGC 719
consensus_16152#1 GACTCNGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGC 207
***** ******************************************************
consensus_16152#0 AAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCT 779
consensus_16152#1 AAGTGGTGATCTCTCCCTCTCCCCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCT 267
********************* **************************************
consensus_16152#0 CGAGCTCGAGCTAGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCA 839
consensus_16152#1 CGAGCTCGAGCTANCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGANTCA 327
************* ****************************************** ***
consensus_16152#0 CCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCT 899
consensus_16152#1 CCNTTNATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCT 387
** ** ******************************************************
consensus_16152#0 TCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGC 959
consensus_16152#1 TCTTGTTTTCTTCTNGGATATTAAGATTTTAATTTTGACNANATTTGGTCTGCATATAGC 447
************** ******** *************** * ******************
consensus_16152#0 TACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGAGGAGATACATAT 1019
consensus_16152#1 TACTGCAGCCATGTANTTACTACTACTACTTANTNTAA---------------------- 485
*************** **************** * ***
consensus_16152#0 GAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGCAAAAAATCCAAGGAAAAGT 1079
consensus_16152#1 ------------------------------------------------------------
consensus_16152#0 TGATCAGTGTGTGGTGTGCTTGTTGTTGTACATACTTGTATGAGTATTATTATATCTCTG 1139
consensus_16152#1 ------------------------------------------------------------
consensus_16152#0 TACCCAGTTTACTGTAGTAGAATAAGATTTTGGAGGTGTGAGATGTAAATAAAATACATA 1199
consensus_16152#1 ------------------------------------------------------------
consensus_16152#0 TATACTACACATATATATTACTTGAGCTTAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAA 1259
consensus_16152#1 ------------------------------------------------------------
consensus_16152#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1304
consensus_16152#1 ---------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||