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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16396#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1547 fasta sequence
[CTTTTTTTTTTTTTTTGCTGAACTGAAAGT-CCAACTACAATTGGGCCTTTGGGAGGCCTTTCTGCAAGTGTTGGACAACTTTAC-AACAGGGAAGCAACATCCA-TTTCTTTCAGTAAC-TTTAC-TTTCATAC-ACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTC-TTC-TTCATGCCTTTTAGATCGTGGGAAAATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTA-TTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAAAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTGCTTGAGCTATCCTCTGCCTGAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGGATTGCGAATCATGTCACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAACTGTCGAGATGTCCGCAACACGGTCATGACTAATCTGGCTGACATGGAGAAGGCCATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA-CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC-AGGATT-CTCGTCAATAATCATGAACTCTTCTACC-AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC-GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTGTGGTGCTTCGGGGCGACGAGAC]
[+] EMBL CB643941 [CTTTTTTTTTTTTTTTGCTGAACTGAAAGT CCAACTACAATTGGGCCTTTGGGAGGCCTTTCTGCAAGTGTTGGACAACTTTAC AACAGGGAAGCAACATCCA TTTCTTTCAGTAAC TTTAC TTTCATAC ACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTC TTC TTCATGCCTTTTAGATCGTGGGAAAATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTA TTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAAAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTGCTTGAGCTATCCTCTGCCTGAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGGATTGCGAATCATGTCACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAACTGTCGAGATGTCCGCAACACGGTCATGACTAATCTGGCTGACATGGAGAAGGCCATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCC ]
[+] EMBL CB658985 [ cccTTTTTT TGAACTGAAAGT CCAACTACAATTGGGCCTTTGGGAGGCCTTTCTGCAAGTGTTGGACAACTTTAC AACAGGGAAGCAACATCCA TTTCTTTCAGTAAC TTTAC TTTCATAC ACATTGATTGATACAAGCACAGATCCAAGATGGGAAATGGTTGGAATACAATAGGTC TTC TTCATGCCTTTTAGATCGTGGGAAAATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTA TTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTGCTTGAGCTATCCTCTGCCTGAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGGATTGCGAATCATGTCACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAACTGTCGAGATGTCCGCAACACGGTCATGACTAATCTGGCTGACATGGAGAAGGCCATTGATTCCACCCATGTCGATAAATGCAC ]
[+] EMBL CB643076 [ ACTGAAAGT CCAACTACAACTTTGACTTTGGGAGGCCTTTCTGCAAGTGTTGGACAACTTTAC AACAGGGAAGCAACATCCA TTTCTTTCACTAAC TTTAC TTTCATAC ACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTC TTC TTCATGCCTTTTAGATCGTGGGAAAATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTA TTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAAAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTGCTTGAGCTATCCTCTGCCTGAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGGATTGCGAATCATGTCACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAACTGTCGAGATGTCCGCAACACGGTCATGACTAATCTGGCTGACATGGAGAAGGCCATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGC ]
[-] EMBL BE228440 [ AAAGTCCCAACTACAATTGGGCCTCTGGGAGGCCTTTCTGCAAGTGTTGGACAACTTTACAAACAGGGAAGCAACATCCATTTTCTTTCAGTAACTTTTACTTTTCATACNACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTTCTTTCATGCCTTTTAGATCGTGGGAAAATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCNTAAGATGCCNTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCA ]
[-] EMBL AU223183 [ TTTTTTCAGTAAC TTTAC TTTCATAC ACATTGATTGATACAAGCACAGATCGAAGATGGGAAANGGTTGGAATACAATAGGTC TTC TTCATGCCTTTTANATCGNGGGAAAATGAGTTGATGAGCTACCATCACAGCTTTCTACTCANACGTAATCTTCCTATTGAAGCTA TTCATCTGNGGTTTGCCCTTCTCCCGAGCCCTCAAAAGGTGTGTCTGATGATAATGGCCCTAANATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTGCTTGAGCTATCCTCTGCCTGAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGGATTGCNAATCATGTCACCAGGTGTCGGCTCAAGCTTTTTAGTANAAAGACTAACACGGCCTCTTTC ]
[-] EMBL CB658437 [ GTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTT ]
[-] EMBL CB643075 [ TATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTGGTGGT ]
[-] EMBL CB657196 [ ATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGT ]
[-] EMBL CB642222 [ GAGGACAAGCCTGCCTGTTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTGTGGTGCTTCGGGGCGA ]
[-] EMBL CB657025 [ GGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTG ]
[-] EMBL CB643379 [ ACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGT ]
[-] EMBL CB658984 [ GAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTGTGGTGCTTCGGGGgg ]
[-] EMBL BF430748 [ CTTTGTCAAGCAGTTCTTCAGCAGTTG TTTCGATGACACTTGTGAAGATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTATGTTTCCACCCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTAGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCGCGGCGCGCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGT ]
[-] EMBL OSC104631 [ AAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCA CCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTTAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAANAAAGCAGTAGACNACGATTGGATnantc ]
[-] EMBL AU174262 [ TTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACC AGGATT CTCGTCAATAATCATGAACTCTTCTACC AAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCGCCGCGGGGCGGCGCCG ]
[-] EMBL OSS4377A [ GTTTCATCACCAAGGATTCCCCGNAAATAATCATGAACTCTTCTACCAAAACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATNTCGGTGGACTCNACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGNCNCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATNCGCTCACGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCNCNGNTNGC NCGCGGGGC GCGCCG ]
[-] EMBL AU197854 [ CCGCTCCCGCTCCTCCTTGGTGAGCGCGTACGTCCCGCACACCAGCGCCGACGGCCGC GTGGGCNCCGCGGGGCGGCGCCGCGGCGCGCCGGAGANCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTGTGGTGCTTCGGGGCGACGAGAC]
consensusID : consensus_16396#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1463 fasta sequence
[TCCCNTCTTNTNCGAAAGTCCAACTACAATGGGCCTTGGGAGGCTTTCTGAAGTGTTTTTTTTTTTACAACAGGGAAGCAACATCCATTTCTTTCAG--TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT-GCCTTTTAG-A-TCGTGGGAAA-ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG-CTTGAGCTATCCTC-TGCCT-GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG-ATTGCGAATCATGT-CACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAA-CTGTCGAGATGT-CCGCAACAC-GGTCA-TGACT-AATCTGGCTGACA-T-GGAGAA---GGCCATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCACCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACCAGGATTCTCGTCAATAATCATGAACTCTTCTACCAAACCTGCACGGATCCCCGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTGGTCCCGCACACCAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTGTGGT]
[-] EMBL BM420450 [TCCCNTCTTNTNCGAAAGTCCAACTACAATGGGCCTTGGGAGGCTTTCTGAAGTGTGGACAACTTTACAACAGGGAAGCAACATCCATTTCTTTCAG TAACTTTACTTTCATACNCA TGATGGATACAAGCACAGATCGAAGATGGGAAA GG TGGAATACAATAGGTCTTCTTCAT GCCTTTTAGCACTCGTGGGAAACATGAGTTGATGAGCTGCCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTCGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCC ]
[-] EMBL AU197855 [ TTTTTTTTTTT TTTGGGAAGCAACATCCATTTCTTTCAG TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAN A TCGNGGGAAA ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCANACGTAATCTTCCTATTGAAGCTATTCATCTGNGGTTTGCCCTTCTCCCGAGCCCTCANAAGGNGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG CTTGAGCTATCCTC TGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG ATTGCGAATCATGT CACCAGGTGTCGGCTCAAGCTT ]
[-] EMBL AU032569 [ TTTTTTTTTTT TTTGGGAAGCAACANCCATTTCTTTCAG TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAG A TCGTGGGAAA ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGANGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATNGCCTCNGACTTGAGCTATCCTC TGCCTGGAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGGCATNGCGAATCATGT CACCAGGTGTCGGCTCAAGCTTTTTAGTAGANAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAA ]
[-] EMBL BM422061 [ TTTTTTTTTTACAACAGGGAAGCAACATCCATTTCTTTCAG TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAG A TCGTGGGAAA ATGAGTTGATGAGCTGCCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG CTTGAGCTATCCTC TGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG ATTGCGAATCATGTACACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAA CTGTCGAGATGT CGGAACACGGGTCAc ]
[-] EMBL BI809275 [ TTTTTTTACAACAGGGAAGCAACATCCATTTCTTTCAG TAACTTTACTTTCATACACA TGA TGATACAAGCACAGATCGAAGATGGGAAATGG TGGAATACAATAGGTCTTCTTCAT GCCTTTTAG A TCGTGGGAAA ATGAGTTGATGAGCTGCCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGG TTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATGGCCTCTG CTTGAGCTATCCTCGTGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGC TTGG ATTGCGAATCATGT CACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACA GG CTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAA CTGTCGAGATGTCCCGAAACA GGTCA TGACT AATCTGG TGA ]
[-] EMBL AK065115 [ TACAACAGGGAAGCAACATCCATTTCTTTCAG TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAG A TCGTGGGAAA ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG CTTGAGCTATCCTC TGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG ATTGCGAATCATGT CACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAA CTGTCGAGATGT CCGCAACAC GGTCA TGACT AATCTGGCTGACA T GGAGAA GGCCATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCACCAATTACTTTACCCGTGACAACAACATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAAGCTCAAAATCAAAGTTTCATCACCAGGATTCTCGTCAATAATCATGAACTCTTCTACCAAACCTGCACGGATCCCCGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAAAGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCATGAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGCGGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTCGGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGCGTGGTCCCGCACACCAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGCTCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTGTGGT]
[+] EMBL CB657026 [ cACAGGGAAGCAACATCCATTTCTTTCAG TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAG A TCGTGGGAAA ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG CTTGAGCTATCCTC TGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG ATTGCGAATCATGT CACCAGGTGTCGACTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAA CTGTCGAGATGT CCGCAACAC GGTCA TGACT AATCTGGCTGACA T GGAGAA GGCCATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCCCTCCACAAGAGCTACCACACCTCCTTTGTTTCCACCA ]
[+] EMBL CB657197 [ CAGGGAAGCAACATCCATTTCTTTCAG TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAG A TCGTGGGAAA ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG CTTGAGCTATCCTC TGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG ATTGCGAATCATGT CACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAA CTGTCGAGATGT CCGCAACAC GGTCA TGACT AATCTGGCTGACA T GGAGAA GGCCATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTG ]
[-] EMBL BI807013 [ CATCCATTTCTTTCAGGTTAACTTTACTTTCATACACA TGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCATGGCCTTTTAG A TCGTGGGAAA NGGAGTTGATGAGCTGNCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGG TTG CCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG TTGAGCTATCCTC TGGCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGC TTGG ATTG GAATCATGT CACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGG CTCTTTCACGGTCATGG TTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAACCTGTCGAGATGT CCGCAA ACGGGTCATTGACTAAATCGGGNTGACACTGGGAGAAAGGGGCCAATGGATCCACCA ]
[-] EMBL AK061971 [ ATCCATTTCTTTCAG TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAG A TCGTGGGAAA ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG CTTGAGCTATCCTC TGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG ATTGCGAATCATGT CACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAA CTGTCGAGAT ]
[-] EMBL AU174263 [ TTTTTTCAG TAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAN A TCGTGGGAAA ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCANACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCANAAGGTGTGTCTGATGATAATGGCCCTAANATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG CTTGAGCTATCCTC TGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG ATTGCGAATCATGT CACCAGGTGTCGGCTCAAGCTTTTTAGTANAAAGACTAACACGGC ]
[+] EMBL CB650777 [ TTTCAG TAACTTTACTTTCATACACATTGATTGCTACAAGCACAGATCGAAGATGGGAAATGGTTGGAATACAATAGGTCTTCTTCAT GCCTTTTAG A TCGTGGGAAA ATGAGTTGATGAGCTACCATCACAGCTTTCTACTCAGACGTAATCTTCCTATTGAAGCTATTCATCTGTGGTTTGCCCTTCTCCCGAGCCCTCAGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTGAACTGAGAGTTAATCCACTCTCAGGCTGGAATCTTAACATATCAGCACGAGCCATTGCCTCTG CTTGAGCTATCCTC TGCCT GAATATCTGAGCCATCTCATCAGCCTTCTCAAAAACAAGCTTTGG ATTGCGAATCATGT CACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACTAACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTGCAGAA CTGTCGAGATGT CCGCAACAC GGTCA TGACT AATCTGGCTGACA T GGAGAA GGCCATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAAGACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAGGACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAGCAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGA ]
consensusID : consensus_16396#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 665 fasta sequence
[CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAACCCAACTACAATTGGGCCTTTGGGAAGCCTTTCTGCAAGGGGTGGACAACTTTACAACAGGGAAACAACATCCATTTCTTTCAGAAACTTTACTTTCATACACATTGATTGAAACAAACACAAAACCAAAAAGGGAAATGGGTGGAAAACAAAAGGGCTTCTTCATGCCTTTTAAAACGGGGGAAAAAGAATTGAAGAACTACCATCCCAGCTTTCTACTCAAAAGTAATCTTCCTAATGAAACTATTCCTCTGGGGGTTGCCCCTCCCCCCAACCCCCAAAAGGGGGGTCTGAAGAAAATGGCCCCAAAAAGCCCCCTGAACTGAAAATTAATCCCCTCCCCGGGTGGAATCTTAACATATCAGCACGAACCATTGCCCCTGCTTGAACTATCCCCTGCCTGAAAATCTGAACCATCTCATCAGCCTTCTCAAAAAAAAGCTTTGGATTGCGAATCATGTCCCCAGGGGGCGGCTCAAGCTTTTTAAAAAAAAAAATAACACGGCCTCTTTCACGGGCATGGGTTAAAAACATAACCTTGAACGTATCTCCTGGTTGCAAAACTGTCAAAAAGTCCCCAACACGGGCATGACTAATCTGGCTGACATGGAAAAAGCCCTTGA]
[+] EMBL CB642223 [CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAACCCAACTACAATTGGGCCTTTGGGAAGCCTTTCTGCAAGGGGTGGACAACTTTACAACAGGGAAACAACATCCATTTCTTTCAGAAACTTTACTTTCATACACATTGATTGAAACAAACACAAAACCAAAAAGGGAAATGGGTGGAAAACAAAAGGGCTTCTTCATGCCTTTTAAAACGGGGGAAAAAGAATTGAAGAACTACCATCCCAGCTTTCTACTCAAAAGTAATCTTCCTAATGAAACTATTCCTCTGGGGGTTGCCCCTCCCCCCAACCCCCAAAAGGGGGGTCTGAAGAAAATGGCCCCAAAAAGCCCCCTGAACTGAAAATTAATCCCCTCCCCGGGTGGAATCTTAACATATCAGCACGAACCATTGCCCCTGCTTGAACTATCCCCTGCCTGAAAATCTGAACCATCTCATCAGCCTTCTCAAAAAAAAGCTTTGGATTGCGAATCATGTCCCCAGGGGGCGGCTCAAGCTTTTTAAAAAAAAAAATAACACGGCCTCTTTCACGGGCATGGGTTAAAAACATAACCTTGAACGTATCTCCTGGTTGCAAAACTGTCAAAAAGTCCCCAACACGGGCATGACTAATCTGGCTGACATGGAAAAAGCCCTTGA]
consensusID : consensus_16396#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 521 fasta sequence
[TTTTTTTTTTTTTTCAGAAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAAATGGAAAATGGTTGAAATACAATAAGGTTTTTCTTCATGCCCTTTTTAAATCCGGGGAAAAATGAGTTTGATGAGCTTGCAATAAAAGGTTTTCTACTCAAAACGTAACCTTTCTTATTGAAGCTATTTAATCTGTGGATAGCCCTTTTTCCAGAGCCCTCAAAAAGTGGGTTATAATAATAAGGCCCCAAAAATAAACTTTTAAATGGAAGATAACCCCCCTTTCCAAGGTCTCTCAAAAAAAGCTTAATGAACACCGACACCCCCAAAGGGGGGGCCGGACACCATTTGCATAAAAAAGAGTCTTATATCCCCCCCCTCGTGCTGCGTTTTAAAAATCGCGCTTGCAAACAATCTGTGTATACACAACAAAACCCTTAGTCCCCACCCCTTTTTGTCCCCCGCGGAAAAAAATAAAAAAAGCCCCCCCCCGCCTCATTCTTCCCCTCAAAGTGGCG]
[+] EMBL CA761597 [TTTTTTTTTTTTTTCAGAAACTTTACTTTCATACACATTGATTGATACAAGCACAGATCGAAAATGGAAAATGGTTGAAATACAATAAGGTTTTTCTTCATGCCCTTTTTAAATCCGGGGAAAAATGAGTTTGATGAGCTTGCAATAAAAGGTTTTCTACTCAAAACGTAACCTTTCTTATTGAAGCTATTTAATCTGTGGATAGCCCTTTTTCCAGAGCCCTCAAAAAGTGGGTTATAATAATAAGGCCCCAAAAATAAACTTTTAAATGGAAGATAACCCCCCTTTCCAAGGTCTCTCAAAAAAAGCTTAATGAACACCGACACCCCCAAAGGGGGGGCCGGACACCATTTGCATAAAAAAGAGTCTTATATCCCCCCCCTCGTGCTGCGTTTTAAAAATCGCGCTTGCAAACAATCTGTGTATACACAACAAAACCCTTAGTCCCCACCCCTTTTTGTCCCCCGCGGAAAAAAATAAAAAAAGCCCCCCCCCGCCTCATTCTTCCCCTCAAAGTGGCG]
consensusID : consensus_16396#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 519 fasta sequence
[TTTTTTTTTTAGTGCAGGAAATAGAGATGCTGAACTGAAAGTCCAACTACAATGGGCC-TTGGGAGGCCTTTCTGCAAGTG-TGGACAACTTTACAACAGGG-AGCGAACATCCATTGTCTTTC-GTCAACTTTACTTTCATCA-CACTATGCATTGCATCACCACAGCCACCAGCATCGCACAGCATTGGGCACACATGGTGGCAATCACCACATCAGGTCCTTCCTTCCATGCCCTTTTTCAGCATCGGTGGGCACACACATGCAGTTTGCATGAGCTGCGCATCACCAGTTTCTACTCAGCACGTCAATCTTCCTCATTTGAAGCTCATTCCATCTTGGTGGTTGTGCTCTCCCGAGACCCTCCAGCACAGGTGGTGTCTGATGATCAATGGCCTAAGATGCCCTCTGCAACTGAGAGTTCAAATCCCACTCTCAGGCTGGAATCTTAACATATCAGCCACGAGCCATTGCTCTGCTTGAGCTATCCTCTGCTGAATATCTTGAGCCATCTCATCAGCTTC]
[-] EMBL BI812138 [TTTTTTTTTTAGTGCAGGAAATAGAGATGCTGAACTGAAAGTCCAACTACAATGGGCC TTGGGAGGCCTTTCTGCAAGTG TGGACAACTTTACAACAGGG AGCGAACATCCATTGTCTTTC GTCAACTTTACTTTCATCA CACTAT ]
[-] EMBL BI811895 [ tttttttttTAGAGATGCTGAACTGAAAGTCCAACTACAATGGGCCTTTGGGAGGCCTTTCTGCAAGTGTTGGACAACTTTACAACAGGGAAGC AACATCCATT TCTTTCAGT AACTTTACTTTCATCACCACCATGCATTGCATCACCACAGCCACCAGCATCGCACAGCATTGGGCACACATGGTGGCAATCACCACATCAGGTCCTTCCTTCCATGCCCTTTTTCAGCATCGGTGGGCACACACATGCAGTTTGCATGAGCTGCGCATCACCAGTTTCTACTCAGCACGTCAATCTTCCTCATTTGAAGCTCATTCCATCTTGGTGGTTGTGCTCTCCCGAGACCCTCCAGCACAGGTGGTGTCTGATGATCAATGGCCTAAGATGCCCTCTGCAACTGAGAGTTCAAATCCCACTCTCAGGCTGGAATCTTAACATATCAGCCACGAGCCATTGCTCTGCTTGAGCTATCCTCTGCTGAATATCTTGAGCCATCTCATCAGCTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16396#0 -------------CTTTTTTTTTTTTTTTGCTGAACTGAAAGTCCAACTACAATTGGGCC 47
consensus_16396#1 ------------------------TCCCNTCTTNTNCGAAAGTCCAACTACAATGGG--C 34
consensus_16396#2 CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAACCCAACTACAATTGGGCC 60
consensus_16396#4 -TTTTTTTTTTAGTGCAGGAAATAGAGATGCTGAACTGAAAGTCCAACTACAATGGG--C 57
consensus_16396#3 ------------------------------------------------------------
consensus_16396#0 TTTGGGAGGCCTTTCTGCAAGTGTTGGACAACTTTACAACAGGGAAGCAACATCCATT-T 106
consensus_16396#1 CTTGGGAGGC-TTTCTG-AAGTGTTTT-TTTTTTTACAACAGGGAAGCAACATCCATT-T 90
consensus_16396#2 TTTGGGAAGCCTTTCTGCAAGGGGTGGACAACTTTACAACAGGGAAACAACATCCATT-T 119
consensus_16396#4 CTTGGGAGGCCTTTCTGCAAGTG-TGGACAACTTTACAACAGGGAGCGAACATCCATTGT 116
consensus_16396#3 --------------------------------------------------TTTTTTTTTT 10
* ** *
consensus_16396#0 CTTTCAGTAACTTTACTTTCAT------ACACATTG-------ATTGATACAAGCACAGA 153
consensus_16396#1 CTTTCAGTAACTTTACTTTCAT------ACACATTG-------ATTGATACAAGCACAGA 137
consensus_16396#2 CTTTCAGAAACTTTACTTTCAT------ACACATTG-------ATTGAAACAAACACAAA 166
consensus_16396#4 CTTTCGTCAACTTTACTTTCATCACACTATGCATTGCATCACCACAGCCACCAGCATCGC 176
consensus_16396#3 TTTTCAGAAACTTTACTTTCAT------ACACATTG-------ATTGATACAAGCACAGA 57
**** ************** * ***** * * ** * **
consensus_16396#0 TCGAAGATGGGAA---ATGGTTGGAAT----ACAATAGGTCTTC---TTCATGCCTTTT- 202
consensus_16396#1 TCGAAGATGGGAA---ATGGTTGGAAT----ACAATAGGTCTTC---TTCATGCCTTTT- 186
consensus_16396#2 ACCAAAAAGGGAA---ATGGGTGGAAA----ACAAAAGGGCTTC---TTCATGCCTTTT- 215
consensus_16396#4 ACAGCATTGGGCACACATGGTGGCAATCACCACATCAGGTCCTTCCTTCCATGCCCTTTT 236
consensus_16396#3 TCGAAAATGGAAA---ATGGTTGAAAT----ACAATAAGGTTTTTC-TTCATGCCCTTTT 109
* ** * **** * ** *** * * * * ****** ***
consensus_16396#0 ---AGATCGTGGGAAAATGAGTTG--------ATGAGCTAC-CATCACAGCTTT-CTACT 249
consensus_16396#1 ---AGATCGTGGGAAAATGAGTTG--------ATGAGCTAC-CATCACAGCTTT-CTACT 233
consensus_16396#2 ---AAAACGGGGGAAAAAGAATTG--------AAGAACTAC-CATCCCAGCTTT-CTACT 262
consensus_16396#4 TCAGCATCGGTGGGCACACACATGCAGTTTGCATGAGCTGCGCATCACCAGTTT-CTACT 295
consensus_16396#3 T-AAATCCGGGGAAAAATGAGTTTG-------ATGAGCTTGCAATAAAAGGTTTTCTACT 161
** * * * * * ** ** ** *** *****
consensus_16396#0 CAG-ACGT-AATCTTCCTA--TTGAAGCT-ATTCA--TCTGTGGTTTGCCCTTCTCCCGA 302
consensus_16396#1 CAG-ACGT-AATCTTCCTA--TTGAAGCT-ATTCA--TCTGTGGTTTGCCCTTCTCCCGA 286
consensus_16396#2 CAA-AAGT-AATCTTCCTA--ATGAAACT-ATTCC--TCTGGGGGTTGCCCCTCCCCCCA 315
consensus_16396#4 CAGCACGTCAATCTTCCTCATTTGAAGCTCATTCCATCTTGGTGGTTGTGCTCTCCCGAG 355
consensus_16396#3 CAAAACGT-AACCTTTCTTA-TTGAAGCT-ATTTAA-TCTGTGGATAGCCCTTTTTCCAG 217
** * ** ** *** ** **** ** *** ** * * * * *
consensus_16396#0 GCCCTC----AAAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTG-AACTGAGA 357
consensus_16396#1 GCCCTC----AGAAGGTGTGTCTGATGATAATGGCCCTAAGATGCCCTCTG-AACTGAGA 341
consensus_16396#2 ACCCCC----AAAAGGGGGGTCTGAAGAAAATGGCCCCAAAAAGCCCCCTG-AACTGAAA 370
consensus_16396#4 ACCCTCCAGCACAGGTGGTGTCTGATGATCAATGGCCTAAGATGCCCTCTGCAACTGAGA 415
consensus_16396#3 AGCCCTCA--AAAAGTGGGTTATAATAATAAGGCCCCAAAAATAAACTTTT-AAATGGAA 274
** * * * * * * * * * ** ** * * * ** ** *
consensus_16396#0 GTTAA---TCCACTCTCAGGCTGGAATCTTAACATATCAGC-ACGAGC--CATTGCCTCT 411
consensus_16396#1 GTTAA---TCCACTCTCAGGCTGGAATCTTAACATATCAGC-ACGAGC--CATTGCCTCT 395
consensus_16396#2 ATTAA---TCCCCTCCCCGGGTGGAATCTTAACATATCAGC-ACGAAC--CATTGCCCCT 424
consensus_16396#4 GTTCAAATCCCACTCTCAGGCTGGAATCTTAACATATCAGCCACGAGC--CATTGC-TCT 472
consensus_16396#3 GATAA--CCCCCCTTTCCAA--GGTCTCTCAAAAAAAGCTTAATGAACACCGACACCCCC 330
* * ** ** * ** *** ** * * * ** * * * *
consensus_16396#0 ---GCTTGAGCTATCCTCTGCCTGAATATCT-GAGCCATCTCATCAGCCTTCTCAAAAAC 467
consensus_16396#1 ---GCTTGAGCTATCCTCTGCCTGAATATCT-GAGCCATCTCATCAGCCTTCTCAAAAAC 451
consensus_16396#2 ---GCTTGAACTATCCCCTGCCTGAAAATCT-GAACCATCTCATCAGCCTTCTCAAAAAA 480
consensus_16396#4 ---GCTTGAGCTATCCTCTGC-TGAATATCTTGAGCCATCTCATCAGCTTC--------- 519
consensus_16396#3 AAAGGGGGGGCCGGACACCATTTGCATAAAAAAGAGTCTTATATCCCCCCCCTCG----- 385
* * * * * ** * * * *** *
consensus_16396#0 AAGCTTTGGATTGCGAATCATGTCACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACT 527
consensus_16396#1 AAGCTTTGGATTGCGAATCATGTCACCAGGTGTCGGCTCAAGCTTTTTAGTAGAAAGACT 511
consensus_16396#2 AAGCTTTGGATTGCGAATCATGTCCCCAGGGGGCGGCTCAAGCTTTTTAAAAAAAAAAAT 540
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 -TGCTGCGTTTTAAAAATCGCGCTTGCAAACAAT--CTGTGTATACACAACAAAACCCTT 442
consensus_16396#0 AACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTG 587
consensus_16396#1 AACACGGCCTCTTTCACGGTCATGGCTTAGAATCATAACCTTGAGCGTATCTCCTGGTTG 571
consensus_16396#2 AACACGGCCTCTTTCACGGGCATGGGTTAAAAACATAACCTTGAACGTATCTCCTGGTTG 600
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 AGTCCCCACCCCTTTTTGTCCCCCGCGGAAAAAAATAAAAAAAGCCCCCCCCCGCCTCAT 502
consensus_16396#0 CAGAACTGTCGAGATGTCCGCAACACGGTCATGACTAATCTGGCTGACATGGAGAAGGCC 647
consensus_16396#1 CAGAACTGTCGAGATGTCCGCAACACGGTCATGACTAATCTGGCTGACATGGAGAAGGCC 631
consensus_16396#2 CAAAACTGTCAAAAAGTCCCCAACACGGGCATGACTAATCTGGCTGACATGGAAAAAGCC 660
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 TCTTCCCCTCAAAGTGGCG----------------------------------------- 521
consensus_16396#0 ATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAA 707
consensus_16396#1 ATTGATTCCACCAATGTCGATAAATGCACCATAAGGTTTCAGGCTCTCGACAGTTCCCAA 691
consensus_16396#2 CTTGA------------------------------------------------------- 665
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 ------------------------------------------------------------
consensus_16396#0 GACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAG 767
consensus_16396#1 GACAACTGAACCAATACCAAGCTGAGCTTGACTATCTGCCATTGCCTTGCGGTTACTGAG 751
consensus_16396#2 ------------------------------------------------------------
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 ------------------------------------------------------------
consensus_16396#0 GACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAG 827
consensus_16396#1 GACAAGCCTGCCTTGTTCCTCATCGACCTCCACAAACTTCAGAGGTAGTTCTTTGTCAAG 811
consensus_16396#2 ------------------------------------------------------------
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 ------------------------------------------------------------
consensus_16396#0 CAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCC 887
consensus_16396#1 CAGTTCTTCAGCAGTTGATTTCGATGACACTTGTGAAAATGGAACAAATCCCTTAAGGCC 871
consensus_16396#2 ------------------------------------------------------------
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 ------------------------------------------------------------
consensus_16396#0 CTCCACAAGAGCTACCACACCTCCTTTGTTTCCACCAATTACTTTACCCGTGACAACAAC 947
consensus_16396#1 CTCCACAAGAGCTACCACACCTCCTTTGTTTCCACCAATTACTTTACCCGTGACAACAAC 931
consensus_16396#2 ------------------------------------------------------------
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 ------------------------------------------------------------
consensus_16396#0 ATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAA 1007
consensus_16396#1 ATCTTCTGCTTGAAGCTGTCTGCACCTTTCCCAGGCAAGGTCTTGCTGAATTGCTTGTAA 991
consensus_16396#2 ------------------------------------------------------------
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 ------------------------------------------------------------
consensus_16396#0 GCTCAAAATCAAAGTTTCATCACCAGGATTCTCGTCAATAATCATGAACTCTTCTACCAA 1067
consensus_16396#1 GCTCAAAATCAAAGTTTCATCACCAGGATTCTCGTCAATAATCATGAACTCTTCTACCAA 1051
consensus_16396#2 ------------------------------------------------------------
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 ------------------------------------------------------------
consensus_16396#0 ACCTGCACGGATCCCTGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAA 1127
consensus_16396#1 ACCTGCACGGATCCCCGCCTCTTCTATATGGTTGACATCGAGAAGGCATGCCTCATCCAA 1111
consensus_16396#2 ------------------------------------------------------------
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 ------------------------------------------------------------
consensus_16396#0 AGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCAT 1187
consensus_16396#1 AGGCAAGAAAGCAGTAGACTTCGATTGGATATCAACATATGCACCATTTGAAGTGGTCAT 1171
consensus_16396#2 ------------------------------------------------------------
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 ------------------------------------------------------------
consensus_16396#0 GAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGC 1247
consensus_16396#1 GAACACTGTTCCTTTAATGAGTGAGCCGATATCGGTGTCGATGTCGGTGGACTCGACGGC 1231
consensus_16396#2 ------------------------------------------------------------
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 ------------------------------------------------------------
consensus_16396#0 GGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTC 1307
consensus_16396#1 GGAGTCGAGGTCCTCGGGCGAGAAGGAGACGCCCTCCATGGGCGCGGTGCGGCAGCGCTC 1291
consensus_16396#2 ------------------------------------------------------------
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 ------------------------------------------------------------
consensus_16396#0 GGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGC 1367
consensus_16396#1 GGAGGCCTCGTCGAACAGCTGGCACATCCGCTCCCGCTCCCGCTCCTCCTTGGTGAGCGC 1351
consensus_16396#2 ------------------------------------------------------------
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 ------------------------------------------------------------
consensus_16396#0 GTACGTCCCGCACACCAGCGCCGACGGCCGCGTGGGCGCCGCGGGGCGGCGCCGCGGCGC 1427
consensus_16396#1 GTG-GTCCCGCACACCAG------------------------------------------ 1368
consensus_16396#2 ------------------------------------------------------------
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 ------------------------------------------------------------
consensus_16396#0 GCCGGAGAGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGC 1487
consensus_16396#1 -------AGCGGCGGGCTCGCCAGCCCCGCGACGTGCTGCGCCAGGGACGCCATTCGCGC 1421
consensus_16396#2 ------------------------------------------------------------
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 ------------------------------------------------------------
consensus_16396#0 TCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTGTGGTGCTTCGGGGCGACGAGAC 1547
consensus_16396#1 TCTCGGCCTACCCGCTGTGGTGTGTTGTGGTTGTGGTGTGGT------------------ 1463
consensus_16396#2 ------------------------------------------------------------
consensus_16396#4 ------------------------------------------------------------
consensus_16396#3 ------------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||