These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16469#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 25 consensus length = 1040 fasta sequence [CAAGCGCCTTTTGCGTATATAAAACGACTGGATCGGATCGATGCCTAGCCATCATTCACTGCACTGCTCTCTCCGTTGTTTATCCATTCGCTACAATTTGCATCTGCAAATTAAAGTTGATAACTAATCATACAAGCTAGTAGCTTCAGCTTGATTTCATCTTCAGTTCTTTCTGGATAACAAATCAGACCAACTTTGTCGATCGATCCAAATTCAGAGAAATTATCTCTGAGTAGTGAATTAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG-CCG-CCGAGAGCCCCAG-CAAGAGCCACGACT-GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG-CAAGGCGCAGAACTACGC-GCC-GCAGTTCCACGTCG-CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT-AGTAGTATTGAT-CAATCGATCA-G-CCA-GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA-GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA-CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG-CATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAA-GCTGTTAAGACA-GCGTGTAAAAA-AGAA-GCTACCATGTAATGGTATTTGCATATTGCAGGATCTTTCTTGGGCCAAAAAAA] [+] EMBL CB651571 [CAAGCGCCTTTTGCGTATATAAAACGACTGGATCGGATCGATGCCTAGCCATCATTCACTGCACTGCTCTCTCCGTTGTTTATCCATTCGCTACAATTTGCATCTGCAAATTAAAGTTGATAACTAATCATACAAGCTAGTAGCTTCAGCTTGATTTCATCTTCAGTTCTTTCTGGATAACAAATCAGACCAACTTTGTCGATCGATCCAAATTCAGAGAAATTATCTCTGAGTAGTGAATTAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTAT ] [+] EMBL AK119789 [ TGCACTGCTCTCTCCGTTGTTTATCCATTCGCTACAATTTGCATCTGCAAATTAAAGTTGATAACTAATCATACAAGCTAGTAGCTTCAGCTTGATTTCATCTTCAGTTCTTTCTGGATAACAAATCAGACCAACTTTGTCGATCGATCCAAATTCAGAGAAATTATCTCTGAGTAGTGAATTAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAA GCTGTTAAGACA GCGTGTAAAAA AGAA GCTACCATGTAATGGTATTTGCATA ] [+] EMBL AK065702 [ CTCTCCGTTGTTTATCCATTCGCTACAATTTGCATCTGCAAATTAAAGTTGATAACTAATCATACAAGCTAGTAGCTTCAGCTTGATTTCATCTTCAGTTCTTTCTGGATAACAAATCAGACCAACTTTGTCGATCGATCCAAATTCAGAGAAATTATCTCTGAGTAGTGAATTAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCA CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA A CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAA GCTGTTAAGACA GCGTGTAAAAA AGAA GCTACCATGTAATGGTATTTGCATATTGCAGGATCT ] [+] EMBL CB642455 [ CCGTTGTTTATCCATTCGCTACAATTTGCATCTGCAAATTAAAGTTGATAACTAATCATACAAGCTAGTAGCTTCAGCTTGATTTCATCTTCAGTTCTTTCTGGATAACAAATCAGACCAACTTTGTCGATCGATCCAAATTCAGAGAAATTATCTCTGAGTAGTGAATTAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAG ] [+] EMBL CB651570 [ TTTATCCCTTCGCTACAATTTGCATCTGCAAATTAAAGTTGATAACTAATCATACAAGCTAGTAGCTTCAGCTTGATTTCATCTTCAGTTCTTTCTGGATAACAAATCAGACCAACTTTGTCGATCGATCCAAATTCAGAGAAATTATCTCTGAGTAGTGAATTAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTANATTTGCGTTCT ] [+] EMBL CB642551 [ TTATCCATTCGCTACAATTTGCATCTGCAAATTAAAGTTGATAACTAATCATACAAGCTAGTAGCTTCAGCTTGATTTCATCTTCAGTTCTTTCTGGATAACAAATCAGACCAACTTTGTCGATCGATCCAAATTCAGAGAAATTATCTCTGAGTAGTGAATTAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTAC ] [+] EMBL CB645740 [ TTATCCATTCGCTACAATTTGCATCTGCAAATTAAAGTTGATAACTAATCATACAAGCTAGTAGCTTCAGCTTGATTTCATCTTCAGTTCTTTCTGGATAACAAATCAGACCAACTTTGTCGATCGATCCAAATTCAGAGAAATTATCTCTGAGTAGTGAATTAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTC ] [+] EMBL CB644938 [ TCCATTCGCTACAATTTGCATCTGCAAATTAAAGTTGATAACTAATCATACAAGCTAGTAGCTTCAGCTTGATTTCATCTTCAGTTCTTTCTGGATAACAAATCAGACCAACTTTGTCGATCGATCCAAATTCAGAGAAATTATCTCTGAGTAGTGAATTAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTA ] [+] EMBL CB648889 [ ACAATTTCCTTAAGGAAATTAAAGTTGATAACTAATCATACAAGCTAGTAGCTTCAGCTTGATTTCATCTTCAGTTCTTTCTGGATAACAAATCAGACCAACTTTGTCGATCGATCCAAATTCAGAGAAATTATCTCTGAGTAGTGAATTAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATA ] [+] EMBL C28416 [ ACAATTTGCATCTGCAAATTAAAGTTGATAACTAATCATACAAGCTAGTAGCTTCAGCTTGATTTCATCTTCAGTTCTTTCTGGATAACAAATCAGACCAACTTTGTCGATCGATCCAAATTCAGAGAAATTATCTCTGAGTAGTGAATTAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGTTCCCCCGCCGCCGGgcaatg ] [+] EMBL CB653991 [ ataaGCATCTGCAAATTAAAGTTGATAACTAATCATACAAGCTAGTAGCTTCAGCTTGATTTCATCTTCACCCCTTTCTGGATAACAAATCAGACCAACTTTGTCGATCGATCCAAATTCAGAGAAATTATCTCTGAGTAGTGAATTAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCAC ] [+] EMBL CB677558 [ ATCTGCAAATTAAAGTTGATAACTAATCATACAAGCTAGTAGCTTCAGCTTGATTTCATCTTCAGTTCTTTCTGGATAACAAATCAGACCAACTTTGTCGATCGATCCAAATTCAGAGAAATTATCTCTGAGTAGTGAATTAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTACATACGTGCATCCGTATATGTA ] [-] EMBL CB650096 [ TATCTCTGAGTAGGGAATTAAAAGATGGGGTCTTTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAACGCTGTTAAGCCATGAATGGAAAAA AGAA GCTACCATG ] [+] EMBL CB650095 [ TCTCTGAGTAGTGAATTAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAA GCTGTTAAGACA GCGTGTAAAAA AGAA GCTACCATGTAA ] [-] EMBL CB662606 [ TGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCGGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAAGGCTGTTAAGACA GCGTGTAAAAA AGAA GCTACCATGTAATGGTATTTGCATATTGCAGGATCTT ] [-] EMBL CB648890 [ CGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATTGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCCCGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTACATACGTGCATCCGTATATGTACATATTCCGCTATGTCGTCCTATGTATGCAAAA GCTGTTAAGACA GCGTGTAAAAATAAAAGGGTACCATGTAATGGTATTT ] [-] EMBL CB642552 [ CGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAA GCTGTTAAGACA GCGTGTAAAAA AGAA GCTACCATGTAATGGTATTTGCATATT ] [-] EMBL CB653992 [ TTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAA GCTGTTAAGACA GCGTGTAAAAA AGAA GCTACCATGTAATGGTATTTGCGTATTGCAGGATCTTTCTTGG ] [-] EMBL CB651572 [ CTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAA GCTGTTAAGACA GCGTGTAAAAA AGAA GCTACCATGTAATGGTATTTGCATATTGCAGGATCTTTCTTGGGCCA ] [-] EMBL CB642456 [ GGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAACTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAACGCTGTTAAGACA GCGAG GGAAA AGAA GCTACCATGTAATGGTATTTGCAaaaaaaaag ] [-] EMBL CB662605 [ GGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCGGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCG CCG CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAATTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAA GCTGTTAAGACA GCGTGTAAAAA AGAA GCTACCATGTAATGGTATTTGCATATTGCAGGATCTTTCTTGGGCCAAAAAA ] [+] EMBL BI811995 [ cgtcgacgcCGCCGCCGCCGCCGTCCGCCCGAGAGCCCCAGCCAAGA CCACGACTGGGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCCCCGCAGGAGGAGATCGCCGGACAAGGCGCAGAGCTACGCAGCCAGCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGTCAGTAGTATTGAT CAATCGATCACG CCA GTGTGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATACGTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCCTTTTGCCATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGC AAA GCTGTTAAGACA GCGTGTAAAAA AGAA GCTACCATGTAATGGTATTTGCAaaaaaaaaa ] [+] EMBL BM421756 [ accaGCC CCT CCGAGAGCCCCAG CAAGAGCCACGACT GGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGG CAAGGCGCAGAGCTACGC GCC GCAGTTCCACGTCG CCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGT AGTAGTATTGAT CAATCGATCA G CCACGTGTGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGC AAA GCTGTTAAGACA GCGTGTAAAAA AGAA GCTACCATGTAATGGTATTTGCAaaa ] [+] EMBL AU056958 [ CC GCAGTTCCACGTCGCCCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCNTCGCATATAGCATAAATTAGT AGTAGTATTGATCCAATCGATCA GCCCA GTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATA GTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTA CTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAA GCTGTTAAGACA GCGTGTAAAAA AGAA GCTACCATGTAATGGTATTTGCATATTGCAGGATCTTTCTTGGGCCAAAAAAA] [+] EMBL BI810913 [ ACTAGAGAGAGATATGATGGTATCTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTG CATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGC AAA GCTGTTAAGACA GCGTGTAAAAA AGAA GCTACCATGTAATGGTATTTGCATATTGCAGGATCTTTCTTGGACCAAAAAAA] consensusID : consensus_16469#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 792 fasta sequence [TAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCC--AC-GA----CGACGCCG--CCGCCGCCGAGAGCCCCAGCAAGAGCCACGACTGGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGGCAAGGCGCAGAACTACGCGCCGCAGTTCCACGTCGCCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGTAGTAGTATTGATCAATCGATCAGCCAGTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATAGTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTACTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTGCATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAAG-CTGTTAAGAC-AGCGTGTAAAAAAGAAGATGCCATGTAATGGTATTTGCATATTGCAGGATCTAAATAAAAGG] [-] EMBL CB645741 [TAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCC AC GA CGACGCCG CCGCCGCCGAGAGCCCCAGCAAGAGCCACGACTGGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGGCAAGGCGCAGAACTACGCGCCGCAGTTCCACGTCGCCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGTAGTAGTATTGATCAATCGATCAGCCAGTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATAGTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTACTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTGCATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAAG CTGTTAAGAC AGCGTGTAAAAAAGAAGATGCCATGTAATGGTATTTGCATATTGCAGGATCTAAATAAAAGG] [-] EMBL CB644939 [ CACCCGTTCTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCC AC GA CGACGCCG CCGCCGCCGAGAGCCCCAGCAAGAGCCACGACTGGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGGCAAGGCGCAGAACTACGCGCCGCAGTTCCACGTCGCCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGTAGTAGTATTGATCAATCGATCAGCCAGTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATAGTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTACTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTGCATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAAGCCTGTTAAGCCTAGCagggg ] [+] EMBL CA758423 [ CTTGGCGATGAGAACAGAGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCAGCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGCCGGCATGGCGCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTATCGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCC AC GA CGACGCCG CCGCCGTCGAGAGCCCCAGCATGAGCCACGACTGGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCCGCCGCAGGAGGAGATCGCCGGCAAGGCGCAGAGCTACGCGCCGCAGTTCCACGTCGCCCGGATCGCCACCGGCAACACATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGTAGTAGTATTGATCAATCGATCAGCCAGTGTGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATAGTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTACTAGTANATTAAATTTGCGGTCTTTGGGTCATTTTGCATCAGTGTATGTACATAC ] [+] EMBL BM421306 [ GCTTCTTCCCCCCGACTGATCGCCGCCGCCGCCCCGCCGCCGAGAGCCCCAGCAAGAGCCACGACTGGTGGACGAGGAGCAACTGGGCGTTCCTGAACGAGCC CCGCAGGAGGAGATCGCCGGCAAGGCGCAGAGCTACGCGCCGCAGTTCCACGTCGCCCGGATCGCCACCGGCAACGCATGAACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGTAGTAGTATTGATCAATCGATCAGCCCGTGTGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATAGTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTACTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTGCATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGC AAAG CTGTTAAGAC AGCGTGTAAAAAAGAAGCTACCATGTAATGGTATTTGCATATTGCAGGATCAAAAAAAA ] consensusID : consensus_16469#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 737 fasta sequence [TTGGGATTTTGGGGGGAAAAGGGGTTTGGGGGGGGTTACNTTGGGGGAANGTTNGGGGGANNTTNNANGGGGGGGGGGGGTTTTGAACCACNNGGGGGGAAAAATTNGNTTCCTTTTGNTTCCCCCCCCCGGGGNANGGGNTTTCCCCCGGGNCCNTTTGAAGGNNAANCTTTTTCCTTGGGGGGGCCTTTTNGNACCGGGAATTGGGGGGGGGTTTTTTCCCNAGAAAAACCCCCCCCNCCGGGGNNCCCAGCAAGGACCAGGATTGTGGAGGGGAGCAATTGGGGTTCTTGAACGGACCCCCCGCAGGGAGGAGATTCCCGGCCAAGGGGCAGGAATAACGGCCCGGCAGTTCAAATTTCGCCCGGGATTCGCCACCGGCAAAGGCATGGAACAACGCCAACAACCCTTCGACCATCGCATATAGCATAAATTAGTAGTAGTATTGATCAATCGATCAGCCAGTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATAGTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTACTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTGCATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAAGCTGTTAAGACAGCGTGTAAAAAAGAAGCTACCATGTAATGGTATTTGCAAAAAAAAAAAAA] [-] EMBL BE229247 [TTGGGATTTTGGGGGGAAAAGGGGTTTGGGGGGGGTTACNTTGGGGGAANGTTNGGGGGANNTTNNANGGGGGGGGGGGGTTTTGAACCACNNGGGGGGAAAAATTNGNTTCCTTTTGNTTCCCCCCCCCGGGGNANGGGNTTTCCCCCGGGNCCNTTTGAAGGNNAANCTTTTTCCTTGGGGGGGCCTTTTNGNACCGGGAATTGGGGGGGGGTTTTTTCCCNAGAAAAACCCCCCCCNCCGGGGNNCCCAGCAAGGACCAGGATTGTGGAGGGGAGCAATTGGGGTTCTTGAACGGACCCCCCGCAGGGAGGAGATTCCCGGCCAAGGGGCAGGAATAACGGCCCGGCAGTTCAAATTTCGCCCGGGATTCGCCACCGGCAAAGGCATGGAACAACGCCAACAACCCTTCGACCATCGCATATAGCATAAATTAGTAGTAGTATTGATCAATCGATCAGCCAGTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATAGTACGTATTACGTTTGATAATTACCCCACGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTACTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTGCATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAAGCTGTTAAG ] [+] EMBL AU222542 [ ACCCCTCGNCCATCGCATATAGCATAAATTAGTAGTAGTATTGATCAATCGATCAGCCAGTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATAGTACGTATTACGTTTGATAATTACCCCNCGCTACAGCAGAGTAGGACTAGAGAGAGATATGATGGTACTAGTAAATTAAATTTGCGTTCTTTGGGTCATTTTGCATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAAGCTGTTAAGACAGCGTGTAAAAAAGAAGCTACCATGTAATGGTATTTGCAAAAAAAAAAAAA] consensusID : consensus_16469#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 685 fasta sequence [GGAGGGCTTCTTCCCCCACGACGACGCCGCCGCCGCCGAGAGCCCCAGCAAGAGCCACGACTGGTACGCACAACAGTAGTATCTATATACTACTTCCCTCTTAAAATATAATAGTTTTTTCTATAAATTTAAACTCACAGTTGTCTAAATTTAAATTAGAAATGCTTATATTTTGAGTTTTTTATGAGAATTCATGATCTGATGATGTGATGGATGGATAGGTGGACGAGGAGCAACTGGGC-GTTCTTGACCGAGCCGCCGCAGGAGGAG-ATCGCCGGCAAGGCGCAGAACTACGCGCCGCAGTTCCACGTCGCCCGGATCGCCTCCGGCAACGCATGA-ACATCGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGTAGTAGTATTGATCA-ATCGATCAGCCAGTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATAGTACGTA-TTACGTTTGATAATTACCCCACGCTACA-GCAGAGTAGGACTAGAGAGAGATATGATGGTACTAGTAAATTAAATTTGCGTTCTTTGGGTCA-TTTTGCATCAGTGTATGTACATATGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAAAGCTGTTAAGAAC-AGTCGTAAAAAAGAAGCTACCCTGTAATGGTATTTGCATATTAAAAAAAAAA] [-] EMBL CB654942 [GGAGGGCTTCTTCCCCCACGACGACGCCGCCGCCGCCGAGAGCCCCAGCAAGAGCCACGACTGGTACGCACAACAGTAGTATCTATATACTACTTCCCTCTTAAAATATAATAGTTTTTTCTATAAATTTAAACTCACAGTTGTCTAAATTTAAATTAGAAATGCTTATATTTTGAGTTTTTTATGAGAATTCATGATCTGATGATGTGATGGATGGATAGGTGGACGAGGAGCAACTGGGC GTTCTTGACCGAGCCGCCGCAGGAGGAG ATCGCCGGCAAGGCGCAGAACTACGCGCCGCAGTTCCACGTCGCCCGGATCGCCTCCGGCAACGCATGA ACATCGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGTAGTAGTATTGATCA ATCGATCAGCCAGTGCGAGTGACGTGGGGCTTGGCTTGGTGTGTGTTCATAGTACGTA TTACGTTTGATAATTACCCCACGCTACA GCAGAGTAGGACTAGAGAGAGATATGATGGTACTAGTAAATTAAATTTGCGTTCTTTGGGTCA TTTTGCATCAGTGTATGTACATATGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGCAAAAAGCTGTTAAGAAC AGTC ] [+] EMBL BI812407 [ TGGACGAGGAGCAACTGGGCGGTTCCTGAACGAGCCGCC CAGGAGGAGTATCTCC GCAAGGCGCAGAGCTACGCGCCGCAGTTCCACGTCGCCCGGATCGCCACCGGCAACGCATGAGACAACGCCACAACCCCTCGACCATCGCATATAGCATAAATTAGTAGTAGTATTGATCACATCGATCA CCAGTGTGAGTGAC TGGGGCTTGGCTTGGTGTGTGTTCATAGTACGTATTTAC TTTGATAATTACCCCACGCTACACGCAGAGTAGGACTAGAGAGAGATATGATGGTACTAGTAAATTAAATTTGCGTTCTTTGGGTCACTTTTGCATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGTCGTCCTATGTATGC CAAAGCTGTTAAGACCGCGT GTAAAAAAGAAGCTACCCTGTAATGGTATTTGCATATTAAAAAAAAAA] consensusID : consensus_16469#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 138 fasta sequence [CTTCTTCCCCCACGACGACCCGCCACCGCCAGAGAGCCCCAGCAAGAGCCAACGACTGGGTGGACGAGGGAGCAACTGGGGCGGTTCCATGAACGAGCCGCCGCAGGAAGGAATGCCGGCAAGGGCGCNAGAACTACG] [+] EMBL BI806205 [CTTCTTCCCCCACGACGACCCGCCACCGCCAGAGAGCCCCAGCAAGAGCCAACGACTGGGTGGACGAGGGAGCAACTGGGGCGGTTCCATGAACGAGCCGCCGCAGGAAGGAATGCCGGCAAGGGCGCNAGAACTACG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_16469#1 ------------------------------------------------------------ consensus_16469#4 ------------------------------------------------------------ consensus_16469#0 CAAGCGCCTTTTGCGTATATAAAACGACTGGATCGGATCGATGCCTAGCCATCATTCACT 60 consensus_16469#2 ------------------------------------------------------------ consensus_16469#3 ------------------------------------------------------------ consensus_16469#1 ------------------------------------------------------------ consensus_16469#4 ------------------------------------------------------------ consensus_16469#0 GCACTGCTCTCTCCGTTGTTTATCCATTCGCTACAATTTGCATCTGCAAATTAAAGTTGA 120 consensus_16469#2 ------------------------------------------------------------ consensus_16469#3 ------------------------------------------------------------ consensus_16469#1 ------------------------------------------------------------ consensus_16469#4 ------------------------------------------------------------ consensus_16469#0 TAACTAATCATACAAGCTAGTAGCTTCAGCTTGATTTCATCTTCAGTTCTTTCTGGATAA 180 consensus_16469#2 ------------------------------------------------------------ consensus_16469#3 ------------------------------------------------------------ consensus_16469#1 ------------------------------------------------------------ consensus_16469#4 ------------------------------------------------------------ consensus_16469#0 CAAATCAGACCAACTTTGTCGATCGATCCAAATTCAGAGAAATTATCTCTGAGTAGTGAA 240 consensus_16469#2 ------------------------------------------------------------ consensus_16469#3 ------------------------------------------------------------ consensus_16469#1 -TAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAG 59 consensus_16469#4 ------------------------------------------------------------ consensus_16469#0 TTAAAAGATGGGGTCTCTGATGGCTGGATGGGATTCACCCGTTCTTGGCGATGAGAACAG 300 consensus_16469#2 ------------------------------------------------TTGGGATTTTGG 12 consensus_16469#3 ------------------------------------------------------------ consensus_16469#1 AGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCA 119 consensus_16469#4 ------------------------------------------------------------ consensus_16469#0 AGTTCTTGCGAGGAGGAACAAGTCGCTGACGAGGGAGGAGGTGGAGGCGTTCTGGAAGCA 360 consensus_16469#2 GGGGAAAAGGGGTTTGGGGGGGGTTACNTTGGGGGAANGTTNGGGGGANNTTNNANGGGG 72 consensus_16469#3 ------------------------------------------GGAGGGCTTCTTCCCCCA 18 consensus_16469#1 GCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGC 179 consensus_16469#4 ------------------------------------------------------------ consensus_16469#0 GCACGGCGGCGAGATGATGTCGGGCTCGCCGCTCGGCTCCCCCGCCGCCGGCGGCATGGC 420 consensus_16469#2 GGGGGGGGTTTTGAACCACNNGGGGGGAAAAATTNGNTTCCTTTTGNTTCCCCCCCCCGG 132 consensus_16469#3 CGACGACGCCGCCG-CCGCCGAGAGCCCCAGCAAGAGCCACGACTGGTACGCACAACAGT 77 consensus_16469#1 GCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTAT 239 consensus_16469#4 ------------------------------------------------------------ consensus_16469#0 GCGGTCGGCCCCGGTGAGCCGCTCGAAGGCGCACGCCTCGTCGCCTCGCGGCGGCCGTAT 480 consensus_16469#2 GGNANGGGNTTTCCCCCGGGNCCNTTTGAAGGNNAANCTTTTTCCTTGGGGGGGCCTTTT 192 consensus_16469#3 AGTATCTATATACTACTTCCCTCTTAAAATATAATAGTTTTTTCTATAAATTTAAACTCA 137 consensus_16469#1 CGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCGCCGCC-GAGA 298 consensus_16469#4 ------------------------CTTCTTCCCCCACGACGAC-CCGCCACCGCCAGAGA 35 consensus_16469#0 CGACCCGGCGACTCGCGTGGAGGGCTTCTTCCCCCACGACGACGCCGCCGCCGCC-GAGA 539 consensus_16469#2 NGNACCGGGAATTGG---GGGGGGGTTTTTTCCCNAGAAAAAC--CCCCCCCNCC-GGGG 246 consensus_16469#3 CAGTTGTCTAAATTTAAATTAGAAATGCTTATATTTTGAGTTTTTTATGAGAATTCATGA 197 * ** * * consensus_16469#1 GCCCCAGCAAGAGCCA-CGACTGG-TGGACGAGG-AGCAACTGGGC--GTTCC-TGAACG 352 consensus_16469#4 GCCCCAGCAAGAGCCAACGACTGGGTGGACGAGGGAGCAACTGGGGCGGTTCCATGAACG 95 consensus_16469#0 GCCCCAGCAAGAGCCA-CGACTGG-TGGACGAGG-AGCAACTGGGC--GTTCC-TGAACG 593 consensus_16469#2 NNCCCAGCAAGGACCA-GGATTG--TGGA--GGGGAGCAATTGGGG---TTCT-TGAACG 297 consensus_16469#3 TCTGATGATGTGATGGATGGATAGGTGGACGAGG-AGCAACTGGGC--GTTCT-TGACCG 253 * * * **** ** ***** **** *** *** ** consensus_16469#1 AGCCGCC-GCAGGAGGAG-ATCGCCGGCAAGG-CGCA-GAACTACGCGCCGCAGTTCCAC 408 consensus_16469#4 AGCCGCC-GCAGGAAGGA-AT-GCCGGCAAGGGCGCNAGAACTACG-------------- 138 consensus_16469#0 AGCCGCC-GCAGGAGGAG-ATCGCCGGCAAGG-CGCA-GAACTACGCGCCGCAGTTCCAC 649 consensus_16469#2 GACCCCCCGCAGGGAGGAGATTCCCGGCCAAGGGGCAGGAATAACGGCCCGGCAGTTCAA 357 consensus_16469#3 AGCCGCC-GCAGGAGGAG-ATCGCCGGCAAGG-CGCA-GAACTACGCGCCGCAGTTCCAC 309 ** ** ***** * ** ***** * * ** *** *** consensus_16469#1 GTCGCCC----GGATCGCCACCGGCAACGCAT--GAACAACGCCA-CAACCCCTCGACCA 461 consensus_16469#4 ------------------------------------------------------------ consensus_16469#0 GTCGCCC----GGATCGCCACCGGCAACGCAT--GAACAACGCCA-CAACCCCTCGACCA 702 consensus_16469#2 ATTTCGCCCGGGATTCGCCACCGGCAAAGGCATGGAACAACGCCAACAACCCTTCGACCA 417 consensus_16469#3 GTCGCCC----GGATCGCCTCCGGCAACGCAT--GAACATCGCCA-CAACCCCTCGACCA 362 consensus_16469#1 TCGCATATAGCATAAATTAGTAGTAGTATTGATCAATCGATCAGCCAGTGCGAGTGACGT 521 consensus_16469#4 ------------------------------------------------------------ consensus_16469#0 TCGCATATAGCATAAATTAGTAGTAGTATTGATCAATCGATCAGCCAGTGCGAGTGACGT 762 consensus_16469#2 TCGCATATAGCATAAATTAGTAGTAGTATTGATCAATCGATCAGCCAGTGCGAGTGACGT 477 consensus_16469#3 TCGCATATAGCATAAATTAGTAGTAGTATTGATCAATCGATCAGCCAGTGCGAGTGACGT 422 consensus_16469#1 GGGGCTTGGCTTGGTGTGTGTTCATAGTACGTATTACGTTTGATAATTACCCCACGCTAC 581 consensus_16469#4 ------------------------------------------------------------ consensus_16469#0 GGGGCTTGGCTTGGTGTGTGTTCATAGTACGTATTACGTTTGATAATTACCCCACGCTAC 822 consensus_16469#2 GGGGCTTGGCTTGGTGTGTGTTCATAGTACGTATTACGTTTGATAATTACCCCACGCTAC 537 consensus_16469#3 GGGGCTTGGCTTGGTGTGTGTTCATAGTACGTATTACGTTTGATAATTACCCCACGCTAC 482 consensus_16469#1 AGCAGAGTAGGACTAGAGAGAGATATGATGGTACTAGTAAATTAAATTTGCGTTCTTTGG 641 consensus_16469#4 ------------------------------------------------------------ consensus_16469#0 AGCAGAGTAGGACTAGAGAGAGATATGATGGTACTAGTAAATTAAATTTGCGTTCTTTGG 882 consensus_16469#2 AGCAGAGTAGGACTAGAGAGAGATATGATGGTACTAGTAAATTAAATTTGCGTTCTTTGG 597 consensus_16469#3 AGCAGAGTAGGACTAGAGAGAGATATGATGGTACTAGTAAATTAAATTTGCGTTCTTTGG 542 consensus_16469#1 GTCATTTTGCATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGT 701 consensus_16469#4 ------------------------------------------------------------ consensus_16469#0 GTCATTTTGCATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGT 942 consensus_16469#2 GTCATTTTGCATCAGTGTATGTACATACGTGCATCCGTATATGTACATATACCGCTATGT 657 consensus_16469#3 GTCATTTTGCATCAGTGTATGTACATATGTGCATCCGTATATGTACATATACCGCTATGT 602 consensus_16469#1 CGTCCTATGTATGCAAAA-GCTGTTAAGACAGCGTGTAAAAAAGAAGATGCCATGTAATG 760 consensus_16469#4 ------------------------------------------------------------ consensus_16469#0 CGTCCTATGTATGCAAAA-GCTGTTAAGACAGCGTGTAAAAAAGAAGCTACCATGTAATG 1001 consensus_16469#2 CGTCCTATGTATGCAAAA-GCTGTTAAGACAGCGTGTAAAAAAGAAGCTACCATGTAATG 716 consensus_16469#3 CGTCCTATGTATGCAAAAAGCTGTTAAGAACAGTCGTAAAAAAGAAGCTACCCTGTAATG 662 consensus_16469#1 GTATTTGCATATTGCAGGATCTAAATAAAAGG------- 792 consensus_16469#4 --------------------------------------- consensus_16469#0 GTATTTGCATATTGCAGGATCTTTCTTGGGCCAAAAAAA 1040 consensus_16469#2 GTATTTGCAAAAAAAAAAAAA------------------ 737 consensus_16469#3 GTATTTGCATATTAAAAAAAAAA---------------- 685 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||