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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1648 cluster # 1648       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1648#0 length = 560 sequences # 2  

consensusID : consensus_1648#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 560
fasta sequence
                              [GCCAGCGGCAAAGCTAGGCCTACCCTTTGATGAAGGTCGTTGGCCACCTCCTTTGCATAGATGCCGAGTGAGCTTGAGCTTGAACAAGCTCGCCGATCACCTCAACCTCTCTTACAGGCTTGCCCCCCCTCCCCCTCCCTCCCAGGTCCCAAGCTCCGCACATTGCCGTTGTTGTCGCCGCCGCCTCTTGCCCTCCTCCGGTGAAAGTAGTACGAAATCAAAATATTCACATTTCAAAAGCACGTGGATTGGGTGACGAAAATTTAGAGGCAGACAAATCAAGTGGCATGTCCTCGAATTTCTTTGGGCCGACGGTCTAACTGAGGGATGGACCACTTCCAAGCATGAAGCATGCGTTCATTGGATCATCCCGTATTCCCGTGTGCCAGTCGACCAAACGCGTCCCCGATGCTTCGTGCTTATCCTTTGGTTGAAGAACGAACAATGAAACATGCAGCGCAACGGTAAGCCACACACTCAATTCGCCGGCGGCCGCGCGGCCGTGCCGTCGCTGCCCACGCGCATTACGCCCTTTCTTCTACCACCTTCGACCCAACGGT]

[+] EMBL CB639358             [GCCAGCGGCAAAGCTAGGCCTACCCTTTGATGAAGGTCGTTGGCCACCTCCTTTGCATAGATGCCGAGTGAGCTTGAGCTTGAACAAGCTCGCCGATCACCTCAACCTCTCTTACAGGCTTGCCCCCCCTCCCCCTCCCTCCCAGGTCCCAAGCTCCGCACATTGCCGTTGTTGTCGCCGCCGCCTCTTGCCCTCCTCCGGTGAAAGTAGTACGAAATCAAAATATTCACATTTCAAAAGCACGTGGATTGGGTGACGAAAATTTAGAGGCAGACAAATCAAGTGGCATGTCCTCGAATTTCTTTGGGCCGACGGTCTAACTGAGGGATGGACCACTTCCAAGCATGAAGCATGCGTTCATTGGATCATCCCGTATTCCCGTGTGCCAGTCGACCAAACGCGTCCCCGATGCTTCGTGCTTATCCTTTGGTTGAAGAACGAACAATGAAACATGCAGCGCAACGGTAAGCCACACACTCAATTCGCCGGCGGCCGCGCGGCCGTGCCGTCGCTGCCCACGCGCATTACGCCCTTTCTTCTACCACCTTCGACCCAACGGT]
[+] EMBL CB639500             [GCCAGCGGCAAAGCTAGGCCTACCCTTTGATGAAGGTCGTTGGCCACCTCCTTTGCATAGATGCCGAGTGAGCTTGAGCTTGAACAAGCTCGCCGATCACCTCAACCTCTCTTACAGGCTTGCCCCCCCTCCCCCTCCCTCCCAGGTCCCAAGCTCCGCACATTGCCGTTGTTGTCGCCGCCGCCTCTTGCCCTCCTCCGGTGAAAGTAGTACGAAATCAAAATATTCACATTTCAAAAGCACGTGGATTGGGTGACGAAAATTTAGAGGCAGACAAATCAAGTGGCATGTCCTCGAATTTCTTTGGGCCGACGGTCTAACTGAGGGATGGACCACTTCCAAGCATGAAGCATGCGTTCATTGGATCATCCCGTATTCCCGTGTGCCAGTCGACCAAACGCGTCCCCGATGCTTCGTGCTTATCCTTTGGTTGAAGAACGAACAATGAAACATGCAGCGCAACGGTTAGCCACACACTCAATTCGCCGGCGGCCGC                                                                ]


>consensus_1648#0 GCCAGCGGCAAAGCTAGGCCTACCCTTTGATGAAGGTCGTTGGCCACCTCCTTTGCATAG ATGCCGAGTGAGCTTGAGCTTGAACAAGCTCGCCGATCACCTCAACCTCTCTTACAGGCT TGCCCCCCCTCCCCCTCCCTCCCAGGTCCCAAGCTCCGCACATTGCCGTTGTTGTCGCCG CCGCCTCTTGCCCTCCTCCGGTGAAAGTAGTACGAAATCAAAATATTCACATTTCAAAAG CACGTGGATTGGGTGACGAAAATTTAGAGGCAGACAAATCAAGTGGCATGTCCTCGAATT TCTTTGGGCCGACGGTCTAACTGAGGGATGGACCACTTCCAAGCATGAAGCATGCGTTCA TTGGATCATCCCGTATTCCCGTGTGCCAGTCGACCAAACGCGTCCCCGATGCTTCGTGCT TATCCTTTGGTTGAAGAACGAACAATGAAACATGCAGCGCAACGGTAAGCCACACACTCA ATTCGCCGGCGGCCGCGCGGCCGTGCCGTCGCTGCCCACGCGCATTACGCCCTTTCTTCT ACCACCTTCGACCCAACGGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)