These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_17010#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 672 fasta sequence [GCTGTCCTTTGCCAGTTAATTTGATAGTTGCCCCTTAACAACTAAATAGCGAACCTCTGAGCAGATGGCCTTAATATCTATCTACTGAAGCTTGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG-GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA-GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC-TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAA-CGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCAAAAAAAAAAAAAAAAAAA] [+] EMBL AU161869 [GCTGTCCTTTGCCAGTTAATTTGATAGTTGCCCCTTAACAACTAAATAGCGAACCTCTGAGCAGATGGCCTTAATATCTATCTACTGAAGCTTGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAA GGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTC ] [+] EMBL CF333820 [ CCCCTTAACAACTAAATAGCGAACCTCTGAGCAGATGGCCTTAATATCTATCTACTGAAGCTTGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACCGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATT ATTATTCAGTTTATCTTGTCATGAaaa ] [+] EMBL CF302754 [ gagtagaaaAATATTTATCTACTGAAGCTTGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAA C ] [+] EMBL CF334862 [ CTACTGAAGCTTGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCCCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAA CGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTG ] [+] EMBL CF311177 [ ACTGAAGCTTGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAA CGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGT ] [+] EMBL AU096892 [ TGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAA CGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCAAAAAAAAAAAAAAAAAAA] [+] EMBL AU096891 [ TGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCG CCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTA CACGGGAAGGAAAGCTTGCAAAGCTACTGGATGAat ] [+] EMBL AU096880 [ TGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCG CCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCANGCAG CTAACACGGGAAGGAAGGC TGCAA ] [+] EMBL AU096881 [ GGNTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAA CGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCAAAAAAAAAAAAAAAAAAA] [-] EMBL CF311178 [ TATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGTGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGANGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAA CGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAAAAAAAAAAAA] [-] EMBL CF332834 [ CAGAGTTGGTACCCTAACCTTGTTCAAGGGTACTACCAGG GTCCCCCAGCTTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGTTAATTAACCTTGTTCCATCAGGCAGCTTAGCACGGGAAGGAAGGC TGCAAAGTTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATTTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGTTCATTTGCGTTTTGTGTACTAGTGAA CGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATTTGTTTTACGCAAAAAAAAAAAAAAAAAA ] [-] EMBL CF336353 [ TCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGGTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATTTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGGTCATTTGCGTTTTGTGTACTAGTGAA CGATTTATGTATTTGTCGGGGGGGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAAAA A AAAAAAAAAAAAAAA ] [-] EMBL CF302753 [ AGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGANGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAA CGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAAAAAAAAAAAA] consensusID : consensus_17010#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 598 fasta sequence [ACATGGCCTGAAGGAG-AGAAAATTAGCGTGGCAGTTTAGCTCGGAAGAC--AGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC-GAGCTT-CAT-GGA-TAACCT-CCTTGC-TTGCCT-CCCCTGTG-CCCG-CCCAGCCGAAG-CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC-TTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAATTGTACTACTACTACTTCACACAATTCTTTA] [+] EMBL CF332950 [ACATGGCCTGAAGGAGTAGAAAATTAGCGTGGCAGTTTAGCTCGGAAGAC AGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC GAGCTT CAT GGA TA ] [+] EMBL AK062419 [ ttatc atcgAATTAGCGTGGCAGTTTAGCTCGGAAGAC AGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGCCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC GAGCTT CAT GGA TAACCT CCTTGC TTGCCT CCCCTGTG CCCG CCCAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAATTGTACTACTACTACTTCAC ] [+] EMBL CB629317 [ caGAACACTAAGGCAGAGCAAGAGGTAGCACATCCTCTCGAAAGGGAAGATATGAGCGACCAGAGCACGTACCCCAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGTCGGCGGTGGCAAGGCGAACGCATCCAAGAAAGACCAACC GGGCTT CAT GGA TAACCT CCTTGC TTGCCT CCCCTGTG CCCG CCCAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATAATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGATTTTGTGAGGAAAGAATCTGTTTT ] [+] EMBL CF332835 [ CAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC GAGCTT CAT GGA TAACCT CCTTGC TTGCCT CCCCTGTG CCCG CCCAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGATTTTGTGAGGAAAGAATC ] [+] EMBL CF326202 [ CTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC GAGCTT CAT GGA TAACCT CCTTGC TTGCCT CCCCTGTG CCCG CCCAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAATTGTACTACTACTACTTCACACAATTCTTTA] [+] EMBL CF302844 [ CTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC GAGCTT CAT GGA TAACCT CCTTGC TTGCCT CCCCTGTG CCCG CCCAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGATTTTGTGAGGAAAaa ] [-] EMBL CF302845 [ TATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC GAGCTT CAT GGA TAACCT CCTTGC TTGCCT CCCCTGTG CCCG CCCAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCAT ATTTTGT AGGAAAAAA ] [-] EMBL CF333819 [ CCTGGTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC GAGCTT CAT GGA TAACCT CCTTGC TTGCCT CCCCTGTG CCCG CCCAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATTTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGAaaaaa ] [+] EMBL AU198114 [ GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC GAGCTT CAT GGA TAACCT CCTTGC TTGCCT CCCCTGTG CCCG CCCAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAAaa ] [+] EMBL AU031978 [ CAACCGGNGCTTCCATGGGANTAACCTCCCTTGCTTTGCNTCCCCCTGTGCCCCGCCCCAGCCGAAGCCCAANAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAATTGTACTACTACTACTTCACACAAaaaaaa ] [+] EMBL CF301537 [ gagtagaaaAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGATTTTGTGAGGAAAaa ] [-] EMBL CF301538 [ CAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGATTTTGTGAGGAAAAAA ] consensusID : consensus_17010#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 544 fasta sequence [GAGTAGAAAATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC-TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA-CGTCGTTAATTAGTTCAATCCGGATTGC-TCATTTGC-GTTTTGTGTACTA-GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTA---AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CF298716 [GAGTAGAAAATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTA TTCAAAAAAAAAAA ] [+] EMBL CF333066 [GAGTAGAAA GAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAGCCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTA AAAAAA ] [+] EMBL CF336352 [ CGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC T ATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATT ] [-] EMBL CF301475 [ GCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTA TTCAAAAAAAAAAAAA ] [+] EMBL CF302628 [ CGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGCCCCCCAGCCTCGGCGGCGGCCGGTCTATATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAATATAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC ] [+] EMBL CF301564 [ CGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC ] [+] EMBL OSC8961 [ GTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAA GGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGNCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAG TACTGCATGATTATTCCCATTGTTTGTTTGATTATTCAACATCTAAGTAAGCACCGTGGTTAATTAGTTCAAT ] [-] EMBL CF333065 [ TGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAGCCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTA AAAAAAA ] [+] EMBL OSS15834A [ GTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATNCGGATTGC TCATTTGC GGTTTGTGTACTA GTGAACGNTTTATGTATT ] [+] EMBL OSR3009A [ TAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAA GGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGTTACTGCATGATTATG CCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTT ] [+] EMBL CF302044 [ AGGCAGAGCAAGAGGTACCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAATATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGC ] [+] EMBL CF301118 [ CAGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC ] [-] EMBL CF301117 [ AGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCA A AAAAAA ] [+] EMBL CF301476 [ GGGAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGC ] [+] EMBL C73865 [ CTCCGAA GGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGNTGCAAAGTTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATNCGGATTTCTTAATTTGCGGTTTTGTGTACTAGGTGGACcggtt ] [+] EMBL AU164236 [ TCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCA A AAAAAA ] [+] EMBL CA754999 [ GAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCTAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCA A AAAAAA ] [-] EMBL CF302533 [ TATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCA A AAAAAAAAAAAA ] [-] EMBL CF301563 [ CCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATTTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCA A AAAAAAAA ] [+] EMBL AU161870 [ ATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGNGCTAACTAACCTTGCTCCNTCAGGCAGCCTAGCNCGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCN CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCTTTTGGATTCATTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_17010#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 446 fasta sequence [CTTGGCGGCGGCCGGCCAAAATAACACGGCGGCCGGCGGTGGCAAGTTCAACGCAGCCAAAAAAGACCAACCGAGGTTTATGGATAACCTCCTTGGTTGCCTCCCCTGTGGCCGCCCAACCGAAACCAAAAACGACGCGAGGTAAATAACCTTGCCCCATCAGGCAGCCTAGGACGGGAAGGAAGGCTGCAAAGGTAATGCATGATTAAGCCCAGTGTTTGTTTGATTATTCAGCATTTAAGTAAGGACGTTGTTAATTAGTTCAATCCGGATTGGTCATTTGGGTTTTGTGGAATAATGAACGATTTAAGTATTTGTTGGGGGGGCATGTAATTTAATTTATTCCCCTTTGGATTCATTAATCAGTTTATTTTGTCAAGATTTTGTGAAGAAAAAATTTGTTTTAAGCAAGGTTAAATTGGAATAATAATACTTCACCCAAAAAA] [-] EMBL CF334863 [CTTGGCGGCGGCCGGCCAAAATAACACGGCGGCCGGCGGTGGCAAGTTCAACGCAGCCAAAAAAGACCAACCGAGGTTTATGGATAACCTCCTTGGTTGCCTCCCCTGTGGCCGCCCAACCGAAACCAAAAACGACGCGAGGTAAATAACCTTGCCCCATCAGGCAGCCTAGGACGGGAAGGAAGGCTGCAAAGGTAATGCATGATTAAGCCCAGTGTTTGTTTGATTATTCAGCATTTAAGTAAGGACGTTGTTAATTAGTTCAATCCGGATTGGTCATTTGGGTTTTGTGGAATAATGAACGATTTAAGTATTTGTTGGGGGGGCATGTAATTTAATTTATTCCCCTTTGGATTCATTAATCAGTTTATTTTGTCAAGATTTTGTGAAGAAAAAATTTGTTTTAAGCAAGGTTAAATTGGAATAATAATACTTCACCCAAAAAA] consensusID : consensus_17010#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 361 fasta sequence [GTGGCAGTTTAGCTCGGAAGACAGGCAGAGAAGAGGTAGCACATCCTCTCCGAAGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTNCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGTCGGNNACCAAGATAACACGGCGGCCGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCANCCGAGCTTCATGGATAACCTGCTTGCTTGCTCCCCTGTGCCCGCCAGTCGAAGCAAGNACGACGCGAGCTAACTAACCTTGCTNCATCAGGCAGCTAGCACGGGAAGGAAGGTNCAAAGTACTTNATGATTATGCCAGTGTTTGTTTGATTATTCAGCATCTAGNAAGACGTC] [+] EMBL OSC9121 [GTGGCAGTTTAGCTCGGAAGACAGGCAGAGAAGAGGTAGCACATCCTCTCCGAAGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTNCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGTCGGNNACCAAGATAACACGGCGGCCGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCANCCGAGCTTCATGGATAACCTGCTTGCTTGCTCCCCTGTGCCCGCCAGTCGAAGCAAGNACGACGCGAGCTAACTAACCTTGCTNCATCAGGCAGCTAGCACGGGAAGGAAGGTNCAAAGTACTTNATGATTATGCCAGTGTTTGTTTGATTATTCAGCATCTAGNAAGACGTC] consensusID : consensus_17010#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 221 fasta sequence [AACCTTGCTCCATCCANCCCACCCTCCCCACCCCCAACNNAACGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCAAAAA] [+] EMBL AU089791 [AACCTTGCTCCATCCANCCCACCCTCCCCACCCCCAACNNAACGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCAAAAA] consensusID : consensus_17010#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 103 fasta sequence [TTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAATTGTACTAAAAAAAAAAAAAAAAAAAA] [-] EMBL CF298846 [TTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAATTGTACTAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF298847 [ CATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAATTGTACTAAAAAAAAAAAAAAAAtta ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_17010#2 ------------------------------------------------------------ consensus_17010#4 ------------------------------------------------------------ consensus_17010#0 GCTGTCCTTTGCCAGTTAATTTGATAGTTGCCCCTTAACAACTAAATAGCGAACCTCTGA 60 consensus_17010#5 ------------------------------------------------------------ consensus_17010#1 ------------------------------------------------------------ consensus_17010#3 ------------------------------------------------------------ consensus_17010#6 ------------------------------------------------------------ consensus_17010#2 ---------------------------------------GAGTAGAAAATCATCGAATTA 21 consensus_17010#4 ------------------------------------------------------------ consensus_17010#0 GCAGATGGCCTTAATATCTATCTACTGAAGCTTGGCTTCGACGACCTTATCATCGAATTA 120 consensus_17010#5 ------------------------------------------------------------ consensus_17010#1 -----------------------------------ACATGGCCTGAAGGAGAGAAAATTA 25 consensus_17010#3 ------------------------------------------------------------ consensus_17010#6 ------------------------------------------------------------ consensus_17010#2 GCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGG 81 consensus_17010#4 --GTGGCAGTTTAGCTCGGAAGACAGGCAGAG-AAGAGGTAGCACATCCTCTCCGAAGG- 56 consensus_17010#0 GCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGG 180 consensus_17010#5 ------------------------------------------------------------ consensus_17010#1 GCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGG 85 consensus_17010#3 ------------------------------------------------------------ consensus_17010#6 ------------------------------------------------------------ consensus_17010#2 AAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCC 141 consensus_17010#4 AAGATATGAGCGACCAGAGCTCGTACCCTAACCCTNCTCAAGGGTACTACCAGGGTCCCC 116 consensus_17010#0 AAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCC 240 consensus_17010#5 ------------------------------------------------------------ consensus_17010#1 AAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCC 145 consensus_17010#3 ------------------------------------------------------------ consensus_17010#6 ------------------------------------------------------------ consensus_17010#2 CAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAG 201 consensus_17010#4 CAGCCTCGGCGTCGGNNA-CCAAGATAACACGGCGGCCG-CGGTGGCAAGTCCAACGCAG 174 consensus_17010#0 CAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAG 300 consensus_17010#5 ------------------------------------------------------------ consensus_17010#1 CAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAG 205 consensus_17010#3 ----CTTGGCGGCGGCCGGCCAAAATAACACGGCGGCCGGCGGTGGCAAGTTCAACGCAG 56 consensus_17010#6 ------------------------------------------------------------ consensus_17010#2 CCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCC 261 consensus_17010#4 CCAAGAAAGACCANCCGAGCTTCATGGATAACCTGCTTGCTTGC-TCCCCTGTGCCCGCC 233 consensus_17010#0 CCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCC 360 consensus_17010#5 ------------------------------------------------------------ consensus_17010#1 CCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCC 265 consensus_17010#3 CCAAAAAAGACCAACCGAGGTTTATGGATAACCTCCTTGGTTGCCTCCCCTGTGGCCGCC 116 consensus_17010#6 ------------------------------------------------------------ consensus_17010#2 CAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAG------CCT 315 consensus_17010#4 -AGTCGAAGC-AAGNACGACGCGAGCTAACTAACCTTGCTNCATCAGGCAG------C-T 284 consensus_17010#0 CAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAG------CCT 414 consensus_17010#5 -------------------------------AACCTTGCTCCATCCANCCCACCCTCCCC 29 consensus_17010#1 CAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAG------CCT 319 consensus_17010#3 CAACCGAAACCAAAAACGACGCGAGGTAAATAACCTTGCCCCATCAGGCAG------CCT 170 consensus_17010#6 ---------------------------TTCCCCTTTGGATTCATTATTCAG------TTT 27 * * *** * consensus_17010#2 AGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTAT 375 consensus_17010#4 AGCACGGGAAGGAAGG-TNCAAAG-TACTTNATGATTATGCC-AGTGTTTGTTTGATTAT 341 consensus_17010#0 AGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTAT 474 consensus_17010#5 ACCCCCAACNNAACGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTAT 89 consensus_17010#1 AGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTAT 379 consensus_17010#3 AGGACGGGAAGGAAGGCTGCAAAGGTAATGCATGATTAAGCCCAGTGTTTGTTTGATTAT 230 consensus_17010#6 ATCTTGTCATGATTTTGTGAGGAAAGAATCTGTT-TTACGCATGGT-TAAATTGTACTAA 85 * * * * * * *** ** ** * ** * ** consensus_17010#2 TCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTG 435 consensus_17010#4 TCAGCATCTA-GNAAG-ACGTC-------------------------------------- 361 consensus_17010#0 TCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTG 534 consensus_17010#5 TCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTG 149 consensus_17010#1 TCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTG 439 consensus_17010#3 TCAGCATTTAAGTAAGGACGTTGTTAATTAGTTCAATCCGGATTGGTCATTTGGGTTTTG 290 consensus_17010#6 AAAAAAAAAAAAAAAAAA------------------------------------------ 103 * * * ** * consensus_17010#2 TGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTT 495 consensus_17010#4 ------------------------------------------------------------ consensus_17010#0 TGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTT 594 consensus_17010#5 TGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTT 209 consensus_17010#1 TGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTT 499 consensus_17010#3 TGGAATAATGAACGATTTAAGTATTTGTTGGGGGGGCATGTAATTTAATTTATTCCCCTT 350 consensus_17010#6 ------------------------------------------------------------ consensus_17010#2 TGGATTCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------- 544 consensus_17010#4 ------------------------------------------------------------ consensus_17010#0 TGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCA 654 consensus_17010#5 TGGATTCAAAAA------------------------------------------------ 221 consensus_17010#1 TGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCA 559 consensus_17010#3 TGGATTCATTAATCAGTTTATTTTGTCAAGATTTTGTGAAGAAAAAATTTGTTTTAAGCA 410 consensus_17010#6 ------------------------------------------------------------ consensus_17010#2 --------------------------------------- consensus_17010#4 --------------------------------------- consensus_17010#0 AAAAAAAAAAAAAAAAAA--------------------- 672 consensus_17010#5 --------------------------------------- consensus_17010#1 TGGTTAAATTGTACTACTACTACTTCACACAATTCTTTA 598 consensus_17010#3 AGGTTAAATTGGAATAATAATACTTCACCCAAAAAA--- 446 consensus_17010#6 --------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||