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Oryza sativa
cluster # 1750 cluster # 1750       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1750#0 length = 823 sequences # 2  

consensusID : consensus_1750#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 823
fasta sequence
                              [TTTTTAAAAAGCCGAAAGGGCCGAAAAGGNAGAGAAATGTTCATCTCAGCATATCAGGCGATGGAACAGAACTAATTCCCAGTCCTTATCTACAAACACCTACAGGTCAAGCAGAACCGGATTCCTGCACGAATTAGAGCCAACAAACCGACCAATGAACGGTCCCGATGCAATGCAAGCGAAAGGGGCGCGCGCGTGCGTACGTGTTCGTACGGATTTTGATTATTCCTCGCGCCGGCGCCGGCTGGCGGCGGCGGCGGGGCGGGAGGCTCCACCGATCATCGATGGCGGATGGCTCACATGATCGCGCAGGCGTTGGGGTTCTCCTCGCTGAAGATGGTGGTGAGCCTGTTGGCGTCGGTGG-CATGCGGTAGATCCCCTCGCGCACCGG-GTCGGGTAGCTGTAGCGGTACTCGCCGGAGAAGTACTCGTGCCGCCTCGGCGTCGCCGCCTCCCACCTCGGCAGCGGCGACGGCGTGTACCGGAAGTACCCCGGCGGCGCCGACGTGGCGTGGCGTGCCGGCGCGTGCTCGGCGCCGGCGTTCGGGGCCTGCTGCGTCGTCTGTTCTTGCTGCTGCGGTGGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTCCGGTGGCGGCGGCTCGGGGCCGAACCGGACGCGGCCAGACTTCTTGTTCTTGCCACGCTTCGGCGGCTTCGGCTCGGCCGGTGGCGCGTCCTGCGCCGGCGGAGGCGGCTCTTGCTGGGGTTGGGGCTGCGCCTGGTGGTGCTCGTGCTCCGGCCCCGTGTTGCTGCTGCTGTGCCGGCGGCGGCGGCGTCTGTGGCTGGGGCTCGGG]

[-] EMBL BM038288             [TTTTTAAAAAGCCGAAAGGGCCGAAAAGGNAGAGAAATGTTCATCTCAGCATATCAGGCGATGGAACAGAACTAATTCCCAGTCCTTATCTACAAACACCTACAGGTCAAGCAGAACCGGATTCCTGCACGAATTAGAGCCAACAAACCGACCAATGAACGGTCCCGATGCAATGCAAGCGAAAGGGGCGCGCGCGTGCGTACGTGTTCGTACGGATTTTGATTATTCCTCGCGCCGGCGCCGGCTGGCGGCGGCGGCGGGGCGGGAGGCTCCACCGATCATCGATGGCGGATGGCTCACATGATCGCGCAGGCGTTGGGGTTCTCCTCGCTGAAGATGGTGGTGAGCCTGTTGGCGTCGGTGG CATGCGGTAGATCCCCTCGCGCACCGG GTCGGGTAGCTGTAGCGGTACTCGCCGGAGA                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB620736             [                                                              tGAACAGAACTAATTCCCAGTCCTTATCTAC CTTACCTACAGGTCAAGCAGAACCGGATTCCTGCACGAATTAGAGCCAACAAACCGACCAATGAACGGTCCCGATGCAATGCAA CGAAATGGGCGCGCGCGTGCGTACGTGTTCGTACGGATTTTGATTATTCCTCGCGCCGGC       GGCGGCGGCGGC  GGC  GAGGCTCCACCGATCATCGATGGCGGATGGCTCACATGATCGCGCAGGCGTTGGGGTTCTCCTCGCTGAAGATGGTGGTGAGCCTGTTGGCGTCGGTGGCCATGCGGTAGATCCCCTCGCGCACCGGCGTCGGGTAGCTGTAGCGGTACTCGCCGGAGAAGTACTCGTGCCGCCTCGGCGTCGCCGCCTCCCACCTCGGCAGCGGCGACGGCGTGTACCGGAAGTACCCCGGCGGCGCCGACGTGGCGTGGCGTGCCGGCGCGTGCTCGGCGCCGGCGTTCGGGGCCTGCTGCGTCGTCTGTTCTTGCTGCTGCGGTGGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTCCGGTGGCGGCGGCTCGGGGCCGAACCGGACGCGGCCAGACTTCTTGTTCTTGCCACGCTTCGGCGGCTTCGGCTCGGCCGGTGGCGCGTCCTGCGCCGGCGGAGGCGGCTCTTGCTGGGGTTGGGGCTGCGCCTGGTGGTGCTCGTGCTCCGGCCCCGTGTTGCTGCTGCTGTGCCGGCGGCGGCGGCGTCTGTGGCTGGGGCTCGGG]


>consensus_1750#0 TTTTTAAAAAGCCGAAAGGGCCGAAAAGGNAGAGAAATGTTCATCTCAGCATATCAGGCG ATGGAACAGAACTAATTCCCAGTCCTTATCTACAAACACCTACAGGTCAAGCAGAACCGG ATTCCTGCACGAATTAGAGCCAACAAACCGACCAATGAACGGTCCCGATGCAATGCAAGC GAAAGGGGCGCGCGCGTGCGTACGTGTTCGTACGGATTTTGATTATTCCTCGCGCCGGCG CCGGCTGGCGGCGGCGGCGGGGCGGGAGGCTCCACCGATCATCGATGGCGGATGGCTCAC ATGATCGCGCAGGCGTTGGGGTTCTCCTCGCTGAAGATGGTGGTGAGCCTGTTGGCGTCG GTGGCATGCGGTAGATCCCCTCGCGCACCGGGTCGGGTAGCTGTAGCGGTACTCGCCGGA GAAGTACTCGTGCCGCCTCGGCGTCGCCGCCTCCCACCTCGGCAGCGGCGACGGCGTGTA CCGGAAGTACCCCGGCGGCGCCGACGTGGCGTGGCGTGCCGGCGCGTGCTCGGCGCCGGC GTTCGGGGCCTGCTGCGTCGTCTGTTCTTGCTGCTGCGGTGGCTGCTGCTGTTGCTGCTG CTGCTGCTGCTGCTCCGGTGGCGGCGGCTCGGGGCCGAACCGGACGCGGCCAGACTTCTT GTTCTTGCCACGCTTCGGCGGCTTCGGCTCGGCCGGTGGCGCGTCCTGCGCCGGCGGAGG CGGCTCTTGCTGGGGTTGGGGCTGCGCCTGGTGGTGCTCGTGCTCCGGCCCCGTGTTGCT GCTGCTGTGCCGGCGGCGGCGGCGTCTGTGGCTGGGGCTCGGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)