cluster # 1838

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1838 cluster # 1838 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1838#0 length = 2891 sequences # 2
consensusID : consensus_1838#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2891
fasta sequence
                              [ATAGTACTCTTGCCTCTGACCTCCACGCGGCCCGAGTCAATCCCCTCGGCCAGCCTCGCGAGTTCGCCCGAGCCGCCGCCTGCCTGCCTGCGCGCGCCGATCTCCATCCGTCCCGCGAGGGGAGCAGCGGTGGCTGCCCCGTCGTCGTCCTGCCTCAGGTTGAGGTAAATTATTCATGGTGTTCTCTGACTGGTGATGAATTGCTTGTTGGATACAGGGGGTAGAGGGAATTGAGTCAGTTTCCATATAGATGGAAAAATTGACTGTGAATGATAGATTTTGCTTAATTGTTATATATTAGCCTAGAGAGCCTGATGGAACCTAGAAGAGATGATGTTCGCTCTGCAGCTCAAAGTACCATCCATGGATCCTCGAGCTCAGCACCTACCAGTTCTCCAGTTCCAGACTACCCTATTTCGGGCTCTGTTAAGCCTGTCCTTAATTATTCAATCCAGACTGGGGAGGAGTTTGCTCTTGAATTCATGAGAGATCGAGCTATACCTAAGAAGCATCTGGTTTCTGGCATGTCTCATGATCAAAATGTTGCATCTGGTGCTGGTCTCAAAGATCCTAGAGGACTCCTCGGTGCTCATCGAACAGGTGCAGAGAGTAGATTTGATGCCGCAATATTTTTGACTACTGATATCCAGCAAACAGAGGGGATTGAAAGAAAATCTTTTGCTGAAAATGAAAACAGAAGCAGGCATGTGTCAACTAGCTCAGTTCCACGAATCCCATCTCGCAGTGGAAGTAGTCAGAGACTGTCCCATGGCTATGCTTCTTCTGAGTCTTCAGACTCCTCCAGAAGGATAAAAATTCTCTGTAGCTTTGGGGGAAAAATATTACCCCGACCAAGTGATGGAAAGCTTAGGTATGTTGGTGGTGAGACACATATTATTCGAATCAGTAGGAACATTTCTTGGCAGGAGCTCAAACAGAAGACAACAGCTATCTATAATCAACCCCACGTTATCAAGTATCAGCTACCAGGTGAAGATCTTGATGCGTTGATCTCAGTCTCAAATGATGAAGATTTGAGAAACATGATGGAGGAATGTGGTTTTCTTGACAATGGGGAGGGGTCCCAGAAGCTTAGGATCTTCCTTGTTTCTTCCATTGATTTCGATGACATGAGTTTCAGCCTGGGCAGTATGGATAGTGATTCTGGGATCCAGTATGTTGTTGCCATCAATGGTATGGATGTGGGAACTACAAAGCCTTCAAGTGGGCATGGTTTAGGAAACACGTCCATCAATGAGTTGGATCAGTTCATTAATCTCAACAACGATAGTAACCAACCAAATTCAAGTAGAGATGGTTCAAATTTGTATAGCATGAGTGCATCAACTGCTGTCCCTCCTGCTTTGATTTCAGTACCATTACCAGTGACCCTCTCCAGTGACAGTACTGCAAATTTGTATCCTTACCATAGCCATGGGATGCAGCATGTTCAGGGCTCTGATTACTCCCTCCCAGCTTCCAGTGAAAGATTTTATGACATTGAGGGCCAGACATCTATTCCTTTATCTGTACCTTCTGGTTATAGATATACTTCTCAGTGCACACCGTACTCAGGAACTACTTCACTGCAATCTTTCGACCAACAATCTTACCATGATAGTATGATGGAAGGATCAATGAAGGAGGAAAAACAGCCTTCTGTTAGAGTGCCACTTCAAAAGAATGATCTAGATTATTTCCAATCCCTTGAGAATATGAGTGTTCCTGTGATTCACCATGACTCTTCTAGTACAAACTATATGAATTCAGATGTCCCAGTTACAACTTCCATTCAAGAAGGCCTGAAATCTTCTCTTCAACCAAGTGACAGTGCAAAGAGCCTAGAGACTTATACAGCATCAAAAGCTATGTCTGCTGCTCAAGATTCAGAGTGTAATGAAGATGATCGCCACTCTAGTGGAGCTTTTGCATCTGGCTGCTCTGACTTTCAAGTTGACATGATGGACCACAGCAATAAGAATCCGCCACCTCACTCTGGAAGGGTTTTTCATTCTGAGCGGATACCTAGGGAGCAGGCCGGGTCGCTAAACCGGTTATCTAAATCTGATGATTCACTTAATTCTCAGTTTCTAATTCTTCAGTCACAGTCTGGTGTGGCAAAGGAATCCATTGCAGAAGCTTCTGATCCTGCAATTGAGGGGACTGAAAAATCAAATTTAGATGCTCGGGCAATAAATCTGAATGATCCAGCTACTGTTGATAGTGTCACACCTGAGAAAGAATGTGCCAATACTGTACAACAGACTAGCACATTTAGTGAACAACTGCTTGGTGAAAAGAGGTCCTCAACTGACATGAGTACAAGAAATGTAGAGAAAAATATGCATGCAGCGGAAAATGCTGTAGCTAAATGTAATCTGAATGATGCAACTTCTGATGGCACAAAAATAGTCAATCAGCAGGCGGATCATTCTGCTGTGCCACATCATGTTAGTTGGGACACCCCCAATCCTGCAATCCCAACTGATGTTGGTTGTGATCCATTTGTACCTTCCACCAGTTCTTTAGATGATTCTCACAAGGAACCAATTATCCCTAAAAAGGATAATAAGGACATTGTTGGTGGTATGAGTGAGAGGACCTCCCCTGACATTCTTTCTGATTTCTTCGCCAACACTGCAGCACAATCATTAAGCCCTTTCAATGAACCTGTACTTAGCTTGAACATGCATAATTATGAACCTCAGAGATGGTCATTCTTCAGAAACCTTGCACAAAATGAATTTGAACATAAAAATAAGGAGCAAGACCTGGCAAAGATCGAGGAGGGAGTTTATCCTTTGGTACATGCAGAGCATGATGCAGTTAACGTGAAGAATGTGGCTCCTCAGAATGATGTTCATCTGGAAACTTATCCAGTATCTTCTGGC]

[+] EMBL AK072144             [ATAGTACTCTTGCCTCTGACCTCCACGCGGCCCGAGTCAATCCCCTCGGCCAGCCTCGCGAGTTCGCCCGAGCCGCCGCCTGCCTGCCTGCGCGCGCCGATCTCCATCCGTCCCGCGAGGGGAGCAGCGGTGGCTGCCCCGTCGTCGTCCTGCCTCAGGTTGAGGTAAATTATTCATGGTGTTCTCTGACTGGTGATGAATTGCTTGTTGGATACAGGGGGTAGAGGGAATTGAGTCAGTTTCCATATAGATGGAAAAATTGACTGTGAATGATAGATTTTGCTTAATTGTTATATATTAGCCTAGAGAGCCTGATGGAACCTAGAAGAGATGATGTTCGCTCTGCAGCTCAAAGTACCATCCATGGATCCTCGAGCTCAGCACCTACCAGTTCTCCAGTTCCAGACTACCCTATTTCGGGCTCTGTTAAGCCTGTCCTTAATTATTCAATCCAGACTGGGGAGGAGTTTGCTCTTGAATTCATGAGAGATCGAGCTATACCTAAGAAGCATCTGGTTTCTGGCATGTCTCATGATCAAAATGTTGCATCTGGTGCTGGTCTCAAAGATCCTAGAGGACTCCTCGGTGCTCATCGAACAGGTGCAGAGAGTAGATTTGATGCCGCAATATTTTTGACTACTGATATCCAGCAAACAGAGGGGATTGAAAGAAAATCTTTTGCTGAAAATGAAAACAGAAGCAGGCATGTGTCAACTAGCTCAGTTCCACGAATCCCATCTCGCAGTGGAAGTAGTCAGAGACTGTCCCATGGCTATGCTTCTTCTGAGTCTTCAGACTCCTCCAGAAGGATAAAAATTCTCTGTAGCTTTGGGGGAAAAATATTACCCCGACCAAGTGATGGAAAGCTTAGGTATGTTGGTGGTGAGACACATATTATTCGAATCAGTAGGAACATTTCTTGGCAGGAGCTCAAACAGAAGACAACAGCTATCTATAATCAACCCCACGTTATCAAGTATCAGCTACCAGGTGAAGATCTTGATGCGTTGATCTCAGTCTCAAATGATGAAGATTTGAGAAACATGATGGAGGAATGTGGTTTTCTTGACAATGGGGAGGGGTCCCAGAAGCTTAGGATCTTCCTTGTTTCTTCCATTGATTTCGATGACATGAGTTTCAGCCTGGGCAGTATGGATAGTGATTCTGGGATCCAGTATGTTGTTGCCATCAATGGTATGGATGTGGGAACTACAAAGCCTTCAAGTGGGCATGGTTTAGGAAACACGTCCATCAATGAGTTGGATCAGTTCATTAATCTCAACAACGATAGTAACCAACCAAATTCAAGTAGAGATGGTTCAAATTTGTATAGCATGAGTGCATCAACTGCTGTCCCTCCTGCTTTGATTTCAGTACCATTACCAGTGACCCTCTCCAGTGACAGTACTGCAAATTTGTATCCTTACCATAGCCATGGGATGCAGCATGTTCAGGGCTCTGATTACTCCCTCCCAGCTTCCAGTGAAAGATTTTATGACATTGAGGGCCAGACATCTATTCCTTTATCTGTACCTTCTGGTTATAGATATACTTCTCAGTGCACACCGTACTCAGGAACTACTTCACTGCAATCTTTCGACCAACAATCTTACCATGATAGTATGATGGAAGGATCAATGAAGGAGGAAAAACAGCCTTCTGTTAGAGTGCCACTTCAAAAGAATGATCTAGATTATTTCCAATCCCTTGAGAATATGAGTGTTCCTGTGATTCACCATGACTCTTCTAGTACAAACTATATGAATTCAGATGTCCCAGTTACAACTTCCATTCAAGAAGGCCTGAAATCTTCTCTTCAACCAAGTGACAGTGCAAAGAGCCTAGAGACTTATACAGCATCAAAAGCTATGTCTGCTGCTCAAGATTCAGAGTGTAATGAAGATGATCGCCACTCTAGTGGAGCTTTTGCATCTGGCTGCTCTGACTTTCAAGTTGACATGATGGACCACAGCAATAAGAATCCGCCACCTCACTCTGGAAGGGTTTTTCATTCTGAGCGGATACCTAGGGAGCAGGCCGGGTCGCTAAACCGGTTATCTAAATCTGATGATTCACTTAATTCTCAGTTTCTAATTCTTCAGTCACAGTCTGGTGTGGCAAAGGAATCCATTGCAGAAGCTTCTGATCCTGCAATTGAGGGGACTGAAAAATCAAATTTAGATGCTCGGGCAATAAATCTGAATGATCCAGCTACTGTTGATAGTGTCACACCTGAGAAAGAATGTGCCAATACTGTACAACAGACTAGCACATTTAGTGAACAACTGCTTGGTGAAAAGAGGTCCTCAACTGACATGAGTACAAGAAATGTAGAGAAAAATATGCATGCAGCGGAAAATGCTGTAGCTAAATGTAATCTGAATGATGCAACTTCTGATGGCACAAAAATAGTCAATCAGCAGGCGGATCATTCTGCTGTGCCACATCATGTTAGTTGGGACACCCCCAATCCTGCAATCCCAACTGATGTTGGTTGTGATCCATTTGTACCTTCCACCAGTTCTTTAGATGATTCTCACAAGGAACCAATTATCCCTAAAAAGGATAATAAGGACATTGTTGGTGGTATGAGTGAGAGGACCTCCCCTGACATTCTTTCTGATTTCTTCGCCAACACTGCAGCACAATCATTAAGCCCTTTCAATGAACCTGTACTTAGCTTGAACATGCATAATTATGAACCTCAGAGATGGTCATTCTTCAGAAACCTTGCACAAAATGAATTTGAACATAAAAATAAGGAGCAAGACCTGGCAAAGATCGAGGAGGGAGTTTATCCTTTGGTACATGCAGAGCATGATGCAGTTAACGTGAAGAATGTGGCTCCTCAGAATGATGTTCATCTGGAAACTTATCCAGTATCTTCTGGC]
[+] EMBL CA305684             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATGAATTCAGATGTCCCAGTTACAACTTCCATTCAAGAAGGCCTGAAATCTTCTCTTCAACCAAGTGACAGTGCAAAGAGCCTAGAGACTTATACAGCATCAAAAGCTATGTCTGCTGCTCAAGATTCAGAGTGTAATGAAGATGATCACCACTCTAGTGGAGCTTTTGCATCTGGCTGCTCTGACTTTCAAGTTGACATGATGGACCACAGCAATAAGAATCCGCCACCTCGCTCTGGAAGGGTTTTTCATTCTGAGCGGATACCTAGGGAGCAGGCCGNGTCGCTAAACCGGTTATCTAAATCTGATGATTCACTTAATTCTCAGTTTCTAATTCTTCAGTCACAGTCTGGTGTGGCAAAGGAATCCATTGCAGAAGCTTCTGATCCTGCAATTGAGGGGACTGAAAAATCAAATTTAGATGCTCGGGCAATAAATCTGAATGATCCAGCTACTGTTGATAGTGTCACACCTGAGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]




>consensus_1838#0
ATAGTACTCTTGCCTCTGACCTCCACGCGGCCCGAGTCAATCCCCTCGGCCAGCCTCGCG
AGTTCGCCCGAGCCGCCGCCTGCCTGCCTGCGCGCGCCGATCTCCATCCGTCCCGCGAGG
GGAGCAGCGGTGGCTGCCCCGTCGTCGTCCTGCCTCAGGTTGAGGTAAATTATTCATGGT
GTTCTCTGACTGGTGATGAATTGCTTGTTGGATACAGGGGGTAGAGGGAATTGAGTCAGT
TTCCATATAGATGGAAAAATTGACTGTGAATGATAGATTTTGCTTAATTGTTATATATTA
GCCTAGAGAGCCTGATGGAACCTAGAAGAGATGATGTTCGCTCTGCAGCTCAAAGTACCA
TCCATGGATCCTCGAGCTCAGCACCTACCAGTTCTCCAGTTCCAGACTACCCTATTTCGG
GCTCTGTTAAGCCTGTCCTTAATTATTCAATCCAGACTGGGGAGGAGTTTGCTCTTGAAT
TCATGAGAGATCGAGCTATACCTAAGAAGCATCTGGTTTCTGGCATGTCTCATGATCAAA
ATGTTGCATCTGGTGCTGGTCTCAAAGATCCTAGAGGACTCCTCGGTGCTCATCGAACAG
GTGCAGAGAGTAGATTTGATGCCGCAATATTTTTGACTACTGATATCCAGCAAACAGAGG
GGATTGAAAGAAAATCTTTTGCTGAAAATGAAAACAGAAGCAGGCATGTGTCAACTAGCT
CAGTTCCACGAATCCCATCTCGCAGTGGAAGTAGTCAGAGACTGTCCCATGGCTATGCTT
CTTCTGAGTCTTCAGACTCCTCCAGAAGGATAAAAATTCTCTGTAGCTTTGGGGGAAAAA
TATTACCCCGACCAAGTGATGGAAAGCTTAGGTATGTTGGTGGTGAGACACATATTATTC
GAATCAGTAGGAACATTTCTTGGCAGGAGCTCAAACAGAAGACAACAGCTATCTATAATC
AACCCCACGTTATCAAGTATCAGCTACCAGGTGAAGATCTTGATGCGTTGATCTCAGTCT
CAAATGATGAAGATTTGAGAAACATGATGGAGGAATGTGGTTTTCTTGACAATGGGGAGG
GGTCCCAGAAGCTTAGGATCTTCCTTGTTTCTTCCATTGATTTCGATGACATGAGTTTCA
GCCTGGGCAGTATGGATAGTGATTCTGGGATCCAGTATGTTGTTGCCATCAATGGTATGG
ATGTGGGAACTACAAAGCCTTCAAGTGGGCATGGTTTAGGAAACACGTCCATCAATGAGT
TGGATCAGTTCATTAATCTCAACAACGATAGTAACCAACCAAATTCAAGTAGAGATGGTT
CAAATTTGTATAGCATGAGTGCATCAACTGCTGTCCCTCCTGCTTTGATTTCAGTACCAT
TACCAGTGACCCTCTCCAGTGACAGTACTGCAAATTTGTATCCTTACCATAGCCATGGGA
TGCAGCATGTTCAGGGCTCTGATTACTCCCTCCCAGCTTCCAGTGAAAGATTTTATGACA
TTGAGGGCCAGACATCTATTCCTTTATCTGTACCTTCTGGTTATAGATATACTTCTCAGT
GCACACCGTACTCAGGAACTACTTCACTGCAATCTTTCGACCAACAATCTTACCATGATA
GTATGATGGAAGGATCAATGAAGGAGGAAAAACAGCCTTCTGTTAGAGTGCCACTTCAAA
AGAATGATCTAGATTATTTCCAATCCCTTGAGAATATGAGTGTTCCTGTGATTCACCATG
ACTCTTCTAGTACAAACTATATGAATTCAGATGTCCCAGTTACAACTTCCATTCAAGAAG
GCCTGAAATCTTCTCTTCAACCAAGTGACAGTGCAAAGAGCCTAGAGACTTATACAGCAT
CAAAAGCTATGTCTGCTGCTCAAGATTCAGAGTGTAATGAAGATGATCGCCACTCTAGTG
GAGCTTTTGCATCTGGCTGCTCTGACTTTCAAGTTGACATGATGGACCACAGCAATAAGA
ATCCGCCACCTCACTCTGGAAGGGTTTTTCATTCTGAGCGGATACCTAGGGAGCAGGCCG
GGTCGCTAAACCGGTTATCTAAATCTGATGATTCACTTAATTCTCAGTTTCTAATTCTTC
AGTCACAGTCTGGTGTGGCAAAGGAATCCATTGCAGAAGCTTCTGATCCTGCAATTGAGG
GGACTGAAAAATCAAATTTAGATGCTCGGGCAATAAATCTGAATGATCCAGCTACTGTTG
ATAGTGTCACACCTGAGAAAGAATGTGCCAATACTGTACAACAGACTAGCACATTTAGTG
AACAACTGCTTGGTGAAAAGAGGTCCTCAACTGACATGAGTACAAGAAATGTAGAGAAAA
ATATGCATGCAGCGGAAAATGCTGTAGCTAAATGTAATCTGAATGATGCAACTTCTGATG
GCACAAAAATAGTCAATCAGCAGGCGGATCATTCTGCTGTGCCACATCATGTTAGTTGGG
ACACCCCCAATCCTGCAATCCCAACTGATGTTGGTTGTGATCCATTTGTACCTTCCACCA
GTTCTTTAGATGATTCTCACAAGGAACCAATTATCCCTAAAAAGGATAATAAGGACATTG
TTGGTGGTATGAGTGAGAGGACCTCCCCTGACATTCTTTCTGATTTCTTCGCCAACACTG
CAGCACAATCATTAAGCCCTTTCAATGAACCTGTACTTAGCTTGAACATGCATAATTATG
AACCTCAGAGATGGTCATTCTTCAGAAACCTTGCACAAAATGAATTTGAACATAAAAATA
AGGAGCAAGACCTGGCAAAGATCGAGGAGGGAGTTTATCCTTTGGTACATGCAGAGCATG
ATGCAGTTAACGTGAAGAATGTGGCTCCTCAGAATGATGTTCATCTGGAAACTTATCCAG
TATCTTCTGGC
clustalw multiple alignements is not computed in this case