cluster # 1963

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Oryza sativa
cluster # 1963 cluster # 1963 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1963#0 length = 908 sequences # 2

consensusID : consensus_1963#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 908
fasta sequence

                              [TTAGCCAGTGCGCCACCGGCCACCGGATCGATACCGGCGGCGGCGGCGGTGGCGGTATCCCACCCGCGAGCACGAGCACGAGCACGGCTGCCGCGTCCGGGGCGCAAGTGCGGAAACAGTCCAAGTCCACGCCGCGTTGGGGATCCCACCTAACCTCAACCGCTCCACGCGGGCGCCGAGGGTGCCATGAAGAAGCTGTTCTGCTCCCGCGGCGGCACCGTGGCGAGGAGGTCGGAGAGGGCCCCGATGGCTGAATGGTGCGTGTTCTGCCCCATCGCCCGCCGCGACCCCGCTTGCGACACCGCCCTCCTCTACTCCGATGACAGGGTCATGGCGTTCAAGGACATCAACCCGTCGGCTTTCAGGCACTATCTTGTCATACCCATTGAACATATACCTACTGTCAATAATCTCCAAAGAACCACCGAAGATCACCAGTTAGTTAGTCACATGTTGGCAGTAGGAAGAGATTTACTCAATCGGGATGCTCCCAATTCGGAGGAACAGAGATTTGGTTTTCACCAGCCACCATTTAATAGTGTTGATCACCTTCATCTTCACTGCTTGGCATTGCCATTTACGCCCAGCTGGAGGCAAGTAAAATATACACCTCTTGGTCCCCTTGGAGGGTTTATTGAAGCTGAGAGTCTATTGGAAAGAATACGCCCATAGTCTACCGTTATCACAACTACCGGTACAAGCTATTCTTGCTTAACTTTTGTTGTATTGTCATTTGTACGTGATTCATTGTACATTCACAACACATGGTCTGAAATTGTAGACTAAATCAGACCCACTCTTTC-TGGATGTTGAGCTGCATTGAGTTGATAAATGCCTGCTGTATGAATTTCTTTTCATGGTGGACAGCCTTAGCTTACAAACAAAGGAATAATAACCACCTATGGACC]

[+] EMBL AK108422             [TTAGCCAGTGCGCCACCGGCCACCGGATCGATACCGGCGGCGGCGGCGGTGGCGGTATCCCACCCGCGAGCACGAGCACGAGCACGGCTGCCGCGTCCGGGGCGCAAGTGCGGAAACAGTCCAAGTCCACGCCGCGTTGGGGATCCCACCTAACCTCAACCGCTCCACGCGGGCGCCGAGGGTGCCATGAAGAAGCTGTTCTGCTCCCGCGGCGGCACCGTGGCGAGGAGGTCGGAGAGGGCCCCGATGGCTGAATGGTGCGTGTTCTGCCCCATCGCCCGCCGCGACCCCGCTTGCGACACCGCCCTCCTCTACTCCGATGACAGGGTCATGGCGTTCAAGGACATCAACCCGTCGGCTTTCAGGCACTATCTTGTCATACCCATTGAACATATACCTACTGTCAATAATCTCCAAAGAACCACCGAAGATCACCAGTTAGTTAGTCACATGTTGGCAGTAGGAAGAGATTTACTCAATCGGGATGCTCCCAATTCGGAGGAACAGAGATTTGGTTTTCACCAGCCACCATTTAATAGTGTTGATCACCTTCATCTTCACTGCTTGGCATTGCCATTTACGCCCAGCTGGAGGCAAGTAAAATATACACCTCTTGGTCCCCTTGGAGGGTTTATTGAAGCTGAGAGTCTATTGGAAAGAATACGCCCATAGTCTACCGTTATCACAACTACCGGTACAAGCTATTCTTGCTTAACTTTTGTTGTATTGTCATTTGTACGTGATTCATTGTACATTCACAACACATGGTCTGAAATTGTAGACTAAATCAGACCCACTCTTTC TGGATGTTGAGCTGCATTGAGTTGATAAATGCCTGCTGTATGAATTTCTTTTCATGGTGGACAGCCTTAGCTTACAAACAAAGGAATAATAACCACCTATGGACC]
[+] EMBL CF330117             [                                                                                                                                                                                                                                                                                                                                                                              CACTATCTTGTCATACCCATTGAACATATACCTACTGTCAATAATCTCCAAAGAACCACCGAAGATCACCAGTTAGTTAGTCACATGTTGGCAGTAGGAAGAGATTTACTCAATCGGGATGCTCCCAATTCGGAGGAACAGAGATTTGGTTTTCACCAGCCACCATTTAATAGTGTTGATCACCTTCATCTTCACTGCTTGGCATTGCCATTTACGCCCAGCTGGAGGCAAGTAAAATATACACCTCTTGGTCCCCTTGGAGGGTTTATTGAAGCTGAGAGTCTATTGGAAAGAATACGCCCATAGTCTACCGTTATCACAACTACCGGTACAAGCTATTCTTGCTTAACTTTTGTTGTATTGTCATTTGTACGTGATTCATTGTACATTCACAACACATGGTCTGAAATTGTAGACTAAATCAGACCCACTCTTTCTTGGATGTTGAGCTGCATTGAGTTGATAAATGCCT                                                                       ]




>consensus_1963#0
TTAGCCAGTGCGCCACCGGCCACCGGATCGATACCGGCGGCGGCGGCGGTGGCGGTATCC
CACCCGCGAGCACGAGCACGAGCACGGCTGCCGCGTCCGGGGCGCAAGTGCGGAAACAGT
CCAAGTCCACGCCGCGTTGGGGATCCCACCTAACCTCAACCGCTCCACGCGGGCGCCGAG
GGTGCCATGAAGAAGCTGTTCTGCTCCCGCGGCGGCACCGTGGCGAGGAGGTCGGAGAGG
GCCCCGATGGCTGAATGGTGCGTGTTCTGCCCCATCGCCCGCCGCGACCCCGCTTGCGAC
ACCGCCCTCCTCTACTCCGATGACAGGGTCATGGCGTTCAAGGACATCAACCCGTCGGCT
TTCAGGCACTATCTTGTCATACCCATTGAACATATACCTACTGTCAATAATCTCCAAAGA
ACCACCGAAGATCACCAGTTAGTTAGTCACATGTTGGCAGTAGGAAGAGATTTACTCAAT
CGGGATGCTCCCAATTCGGAGGAACAGAGATTTGGTTTTCACCAGCCACCATTTAATAGT
GTTGATCACCTTCATCTTCACTGCTTGGCATTGCCATTTACGCCCAGCTGGAGGCAAGTA
AAATATACACCTCTTGGTCCCCTTGGAGGGTTTATTGAAGCTGAGAGTCTATTGGAAAGA
ATACGCCCATAGTCTACCGTTATCACAACTACCGGTACAAGCTATTCTTGCTTAACTTTT
GTTGTATTGTCATTTGTACGTGATTCATTGTACATTCACAACACATGGTCTGAAATTGTA
GACTAAATCAGACCCACTCTTTCTGGATGTTGAGCTGCATTGAGTTGATAAATGCCTGCT
GTATGAATTTCTTTTCATGGTGGACAGCCTTAGCTTACAAACAAAGGAATAATAACCACC
TATGGACC

clustalw multiple alignements is not computed in this case