cluster # 1967

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Oryza sativa
cluster # 1967 cluster # 1967 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1967#0 length = 720 sequences # 2

consensusID : consensus_1967#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 720
fasta sequence

                              [ACCAAACTTTAGTAAATACATAAGAAATCCTGCTAAAACTAGACAATATTACTAAATTGTAAAGATTTTGGTATTGCCAAAATTTGGTAAGATTTATTTTGGCTACAATATGAACAGCCCCTTCATTTTCAAAGTGTGTTTTCAAATCTAATCATAGAGAGAAATGAACATTGATAACATTTCATATATATGTTTTTTTAGAAATAGAAAAATATCAACACTTAAACTGATCTTGTTTATTTTTCCCATTTATTTAGCACCATAAAAATGCTTCTTGAGTAAAATTACAACTTATCAGCACCTAAAATTATAAAGGAAATATATATTACCAACAAGAATCTATCTTTACATACAATTTTGATTGTTGAATCTAGAATGACTTACATTGTGAAACGGAGGAAGTAATTCACTAATCAGTATTATGTAGATACTAGTAGATAACCAGGAGTGGTAGATAGTATGTAATTATTCACTAATTTTAAAGTACTACTTTGGCTCATACAGTACTCATACAATTTTAAGCATGGGGACGGGCCCTAGGCCGTCACCCTCTTTGCCCTGCCCCAGAGCCGGGCCTGTAAATGGAAATGCAATAGTGTCACCTAGATTCACTATACAGTCTATAGATGAACTCTAAGAAGGTGAATATATTTATGGTTATGACCGAAAAGAACAAGCTTGATAGTTGGACGCAAAATTTTACACTCGAAGAGAGGAAAA]

[+] EMBL CF330179             [ACCAAACTTTAGTAAATACATAAGAAATCCTGCTAAAACTAGACAATATTACTAAATTGTAAAGATTTTGGTATTGCCAAAATTTGGTAAGATTTATTTTGGCTACAATATGAACAGCCCCTTCATTTTCAAAGTGTGTTTTCAAATCTAATCATAGAGAGAAATGAACATTGATAACATTTCATATATATGTTTTTTTAGAAATAGAAAAATATCAACACTTAAACTGATCTTGTTTATTTTTCCCATTTATTTAGCACCATAAAAATGCTTCTTGAGTAAAATTACAACTTATCAGCACCTAAAATTATAAAGGAAATATATATTACCAACAAGAATCTATCTTTACATACAATTTTGATTGTTGAATCTAGAATGACTTACATTGTGAAACGGAGGAAGTAATTCACTAATCAGTATTATGTAGATACTAGTAGATAACCAGGAGTGGTAGATAGTATGTAATTATTCACTAATTTTAAAGTACTACTTTGGCTCATACAGTACTC                                                                                                                                                                                                                   ]
[-] EMBL CF330178             [                                                                                                                                                                                                                                                                                                                                                                                               CATTGTGGAACGGAGGAAGTAATTCAATAATCAGTATTATGTAGATACTAGTAGATAACCAGGAGTGGTAGATAGTATGTAATTATTCACTAATTTTAAAGTACTACTTTGGCTCATACAGTACTCATACAATTTTAAGCATGGGGACGGGCCCTAGGCCGTCACCCTCTTTGCCCTGCCCCAGAGCCGGGCCTGTAAATGGAAATGCAATAGTGTCACCTAGATTCACTATACAGTCTATAGATGAACTCTAAGAAGGTGAATATATTTATGGTTATGACCGAAAAGAACAAGCTTGATAGTTGGACGCAAAATTTTACACTCGAAGAGAGGAAAA]




>consensus_1967#0
ACCAAACTTTAGTAAATACATAAGAAATCCTGCTAAAACTAGACAATATTACTAAATTGT
AAAGATTTTGGTATTGCCAAAATTTGGTAAGATTTATTTTGGCTACAATATGAACAGCCC
CTTCATTTTCAAAGTGTGTTTTCAAATCTAATCATAGAGAGAAATGAACATTGATAACAT
TTCATATATATGTTTTTTTAGAAATAGAAAAATATCAACACTTAAACTGATCTTGTTTAT
TTTTCCCATTTATTTAGCACCATAAAAATGCTTCTTGAGTAAAATTACAACTTATCAGCA
CCTAAAATTATAAAGGAAATATATATTACCAACAAGAATCTATCTTTACATACAATTTTG
ATTGTTGAATCTAGAATGACTTACATTGTGAAACGGAGGAAGTAATTCACTAATCAGTAT
TATGTAGATACTAGTAGATAACCAGGAGTGGTAGATAGTATGTAATTATTCACTAATTTT
AAAGTACTACTTTGGCTCATACAGTACTCATACAATTTTAAGCATGGGGACGGGCCCTAG
GCCGTCACCCTCTTTGCCCTGCCCCAGAGCCGGGCCTGTAAATGGAAATGCAATAGTGTC
ACCTAGATTCACTATACAGTCTATAGATGAACTCTAAGAAGGTGAATATATTTATGGTTA
TGACCGAAAAGAACAAGCTTGATAGTTGGACGCAAAATTTTACACTCGAAGAGAGGAAAA

clustalw multiple alignements is not computed in this case