cluster # 1982

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Oryza sativa
cluster # 1982 cluster # 1982 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1982#0 length = 1050 sequences # 2

consensusID : consensus_1982#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1050
fasta sequence

                              [TTCTCCCGCCGCCGCCGCCGGAGGAGGCGGCTCCTCGTCGTCGGCCTCGACGACCATGGCACGGATCGTGTCGCGCGCCCTCCCGTTCGCCTCGCGCTCGCCGCAGCTCGGCGCGGCGCTGATACGCTCGGCGCCGATGCGCTGCCCGCCCCTCCCCGCCGCGGCGCCCACCGCCTCGCTGCTCTCCTGGCGCGGGTTCACGCCCTCCTCAGAGCCCTCGCGCTCGGCGCCGCCGCCACCGCCGCTGCCGATGCCGCCCTTCGCGGGGTTCCTCGCCGGCATCCGAAGCTTCCGCAGGGGTAGGCGCGGCCAGTCGGCGGCGAGGCGTGCGCAGCCCCAGGACCCCATCCCTTCACCCCCTCCCGCGCCGAAGGAGAGCGAGATCGAGCTCTACGCGCGAATCGGCATCGACGATGACACGCCCGAAGACCCCGAAGTGCTGAACATTGTAGAAATTCTAAAATTAAATGTTCCGATGGCGATGAAAATTGCACTANATGGGCTTCTGGATTCCAACTACAAAACACGAGACACTTCAATAAGTGATGTCGGGAGGTATGATAAGGTTGAAGTTTCTGTGTTGCTATGCAATGACAACTTCATCCAGAACCTTAACAAAGAATGGAGAGGTGAAGACAGCTGTATTGAAATGCTCTCAATGTCACAATACATTCCTGATCTTGATGTTCCTATTCTAATGTTAGGTGATATTGTAATCTCAGTTGAGACAGCTGCAAGGCAGGCTGAGGAGCGAGGTCATACACTTCTTGATGAAGTGCGGATACTAGCGGTTCGTGGAATTCTACGTCTTCTGGGTTTTGATCACCAAACAAGTCATGAGTCTGCAGTTGAAATGGAGAAGGAGGAGCAGCTCATTTTGAAGAGTCTAAGGTGGAAAGGGAAAAATCTTGCTAAGAGTGTTCTTGATTCGGGCAAGCGTCATACAGAAACATCGGATGGGCAAGTGACAAGTGGTCTAAAAAGAGCTGGAAGCCTAAGATTTTATAGACCAAAATTCAAATATATCTTCTGTGATATGGATGGTACACT]

[+] EMBL CB638224             [TTCTCCCGCCGCCGCCGCCGGAGGAGGCGGCTCCTCGTCGTCGGCCTCGACGACCATGGCACGGATCGTGTCGCGCGCCCTCCCGTTCGCCTCGCGCTCGCCGCAGCTCGGCGCGGCGCTGATACGCTCGGCGCCGATGCGCTGCCCGCCCCTCCCCGCCGCGGCGCCCACCGCCTCGCTGCTCTCCTGGCGCGGGTTCACGCCCTCCTCAGAGCCCTCGCGCTCGGCGCCGCCGCCACCGCCGCTGCCGATGCCGCCCTTCGCGGGGTTCCTCGCCGGCATCCGAAGCTTCCGCAGGGGTAGGCGCGGCCAGTCGGCGGCGAGGCGTGCGCAGCCCCAGGACCCCATCCCTTCACCCCCTCCCGCGCCGAAGGAGAGCGAGATCGAGCTCTACGCGCGAATCGGCATCGACGATGACACGCCCGAAGACCCCGAAGTGCTGAACATTGTAGAAATTCTAAAATTAAATGTTCCGATGGCGATGAAAATTGCACTANATGGGCTTCTGGATTCCAACTACAAAACACGAGACACTTCAATAAGTGATGTCGGGAGGTATGATAAGGTTGAAGTTTCTGTGTTGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB659078             [                                                                                                                                                                                                                                                                                                                            GCGGCGTGGCGTGCGCAGCCCCAGGACCCCATCCCTTCACCCCCTCCCGCGCCGAAGGAGAGCGAGATCGAGCTCTACGCGCGAATCGGCATCGACGATGACACGCCCGAAGACCCCGAAGTGCTGAACATTGTAGAAATTCTAAAATTAAATGTTCCGATGGCGATGAAAATTGCACTAGATGGGCTTCTGGATTCCAACTACAAAACACGAGACACTTCAATAAGTGATGTCGGGAGGTATGATAAGGTTGAAGTTTCTGTGTTGCTATGCAATGACAACTTCATCCAGAACCTTAACAAAGAATGGAGAGGTGAAGACAGCTGTATTGAAATGCTCTCAATGTCACAATACATTCCTGATCTTGATGTTCCTATTCTAATGTTAGGTGATATTGTAATCTCAGTTGAGACAGCTGCAAGGCAGGCTGAGGAGCGAGGTCATACACTTCTTGATGAAGTGCGGATACTAGCGGTTCGTGGAATTCTACGTCTTCTGGGTTTTGATCACCAAACAAGTCATGAGTCTGCAGTTGAAATGGAGAAGGAGGAGCAGCTCATTTTGAAGAGTCTAAGGTGGAAAGGGAAAAATCTTGCTAAGAGTGTTCTTGATTCGGGCAAGCGTCATACAGAAACATCGGATGGGCAAGTGACAAGTGGTCTAAAAAGAGCTGGAAGCCTAAGATTTTATAGACCAAAATTCAAATATATCTTCTGTGATATGGATGGTACACT]




>consensus_1982#0
TTCTCCCGCCGCCGCCGCCGGAGGAGGCGGCTCCTCGTCGTCGGCCTCGACGACCATGGC
ACGGATCGTGTCGCGCGCCCTCCCGTTCGCCTCGCGCTCGCCGCAGCTCGGCGCGGCGCT
GATACGCTCGGCGCCGATGCGCTGCCCGCCCCTCCCCGCCGCGGCGCCCACCGCCTCGCT
GCTCTCCTGGCGCGGGTTCACGCCCTCCTCAGAGCCCTCGCGCTCGGCGCCGCCGCCACC
GCCGCTGCCGATGCCGCCCTTCGCGGGGTTCCTCGCCGGCATCCGAAGCTTCCGCAGGGG
TAGGCGCGGCCAGTCGGCGGCGAGGCGTGCGCAGCCCCAGGACCCCATCCCTTCACCCCC
TCCCGCGCCGAAGGAGAGCGAGATCGAGCTCTACGCGCGAATCGGCATCGACGATGACAC
GCCCGAAGACCCCGAAGTGCTGAACATTGTAGAAATTCTAAAATTAAATGTTCCGATGGC
GATGAAAATTGCACTANATGGGCTTCTGGATTCCAACTACAAAACACGAGACACTTCAAT
AAGTGATGTCGGGAGGTATGATAAGGTTGAAGTTTCTGTGTTGCTATGCAATGACAACTT
CATCCAGAACCTTAACAAAGAATGGAGAGGTGAAGACAGCTGTATTGAAATGCTCTCAAT
GTCACAATACATTCCTGATCTTGATGTTCCTATTCTAATGTTAGGTGATATTGTAATCTC
AGTTGAGACAGCTGCAAGGCAGGCTGAGGAGCGAGGTCATACACTTCTTGATGAAGTGCG
GATACTAGCGGTTCGTGGAATTCTACGTCTTCTGGGTTTTGATCACCAAACAAGTCATGA
GTCTGCAGTTGAAATGGAGAAGGAGGAGCAGCTCATTTTGAAGAGTCTAAGGTGGAAAGG
GAAAAATCTTGCTAAGAGTGTTCTTGATTCGGGCAAGCGTCATACAGAAACATCGGATGG
GCAAGTGACAAGTGGTCTAAAAAGAGCTGGAAGCCTAAGATTTTATAGACCAAAATTCAA
ATATATCTTCTGTGATATGGATGGTACACT

clustalw multiple alignements is not computed in this case