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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 20 cluster # 20       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_20#0 length = 425 sequences # 2  

consensusID : consensus_20#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 425
fasta sequence
                              [CGCAAATANCCGATGGGATCGGTTCAAGCGCCAAATGCAGGACATACATCGGCACAGCGAGTCGAAGGGTTTCGGAGTCAGGAAACCAAATGGTTCCATTTCCATATACACCCTCCCAATGCCTGACTGCATGTGTCAGCGAGCTGAACCATGATATAATACTCCAGCTAGCTAGAGCACTTAGGCAGCAAACGGCCTGGCATTTTTGACACCTCTAAGTAGCCAGACCATATTGTCAGTTTGAACAGAAATTAGGCATCGAAAATTTGCCTCTTCTTTTTTTCGTTTTTGTTAGCAAGAAGAGATTACAGATTGAGATGCAAATTAAGTGGTTGTTAATATGAATGCATTCCACCATATTTACAACTTTTGCCAGGGTAAAAACGTGCCAATTGTATATATAAAAAGGCACATCTATATAAAAA]

[+] EMBL C98263               [CGCAAATANCCGATGGGATCGGTTCAAGCGCCAAATGCAGGACATACATCGGCACAGCGAGTCGAAGGGTTTCGGAGTCAGGAAACCAAATGGTTCCATTTCCATATACACCCTCCCAATGCCTGACTGCATGTGTCAGCGAGCTGAACCATGATATAATACTCCAGCTAGCTAGAGCACTTAGGCAGCAAACGGCCTGGCATTTTTGACACCTCTAAGTAGCCAGACCATATTGTCAGTTTGAACAGAAATTAGGCATCGAAAATTTGCCTCTTCTTTTTTTCGTTTTTGTTAGCAAGAAGAGATTACAGATTGAGATGCAAATTAAGTGGTTGTTAATATGAATGCATTCCACCATATTTACAACTTTTGCCAGGGTAAAAACGTGCCAATTGTATATATAAAAAGGCACATCTATATAAAAA]
[+] EMBL OSC13502             [                     GTTCAAGCGCCAAATGCAGGACATACATCGGCACAGCGAGTCGAAGGGTTTCGGAGTCAGGAAACCAAATGGTTCCATTTCCATATACACCCTCCCAATGCCTGACTGCATGTGTCAGCGAGCTGAACCATGATATAATACTCCAGCTAGCTAGAGCACTTAGGCAGCAAACGGCCTGGCATTTTTGACACCTCTAAGTAGCCAGACCATATTGTCAGTTTGAACAGAAATTAGGCATCGAAAATTTGCCTCTTCTTTTTTTCGTTTTTGTTAGCAAGAAGAGATTACAGATTGAGATGCAAATTAAGTGGTTGTTAATATGAATGCATTCCACCA                                                                    ]


>consensus_20#0 CGCAAATANCCGATGGGATCGGTTCAAGCGCCAAATGCAGGACATACATCGGCACAGCGA GTCGAAGGGTTTCGGAGTCAGGAAACCAAATGGTTCCATTTCCATATACACCCTCCCAAT GCCTGACTGCATGTGTCAGCGAGCTGAACCATGATATAATACTCCAGCTAGCTAGAGCAC TTAGGCAGCAAACGGCCTGGCATTTTTGACACCTCTAAGTAGCCAGACCATATTGTCAGT TTGAACAGAAATTAGGCATCGAAAATTTGCCTCTTCTTTTTTTCGTTTTTGTTAGCAAGA AGAGATTACAGATTGAGATGCAAATTAAGTGGTTGTTAATATGAATGCATTCCACCATAT TTACAACTTTTGCCAGGGTAAAAACGTGCCAATTGTATATATAAAAAGGCACATCTATAT AAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)