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Oryza sativa
cluster # 217 cluster # 217       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_217#0 length = 1964 sequences # 1  
consensus_217#1 length = 1771 sequences # 1  

consensusID : consensus_217#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1964
fasta sequence
                              [CAGAAGAGTGAACTTGGATAGTTGGCAGCTAGAGCAGCCAGCTAGCTAGCTGGAGTCCTTCTTGCATTGGTGGGCAGACTGGAAAGAGAAATTAAACAGCTAGATAGGTTTCTAGACTTGTGTGGTGATGGCATCTGCTCCTCCAGTTCAGGAAGAACCCCTACAGCCAGGGACGAACCACTTCAGGAGCCTGCTTGCTGCTGCTGTGAGGAGCATCAGTTGGAGTTATGCGATCTTTTGGTCCATTTCAACCAGTTGCCCAGGAGTTTTGACTTGGAATGATGGGTTCTACAACGGCGTGGTAAAGACGAGGAAGATATCCAACTCAGCAGACCTCACGGCTGGTCAGCTCGTCGTGCAGAGAAGCGAGCAACTGAGGGAGCTTTACTACTCTCTCCTGTCCGGCGAGTGCGACCACCGGGCGAGGAGGCCCATTGCCGCGCTATCGCCGGAAGATCTCGCAGACACAGAATGGTACTACGTCGTCTGCATGACCTACTCCTTCCAACCCGGCCAAGGGCTGCCAGGCAAAAGCTATGCAAGCAATGCATCTGTTTGGCTGCGCAATGCTCAGTCTGCAGATAGCAAAACATTTCTACGCTCGCTATTAGCTAAGAGCGCGTCTATTCAGACAATCATCTGCATCCCCTTCACGAGTGGCGTGCTTGAGCTGGGGACCACTGATCCGGTTTTGGAGGACCCAAAGTTGGTAAACCGAATCGTTGCATATTTCCAGGAGCTTCAGTTTCCGATATGCTTAGAGGTACTAATGAGCACTAGCCCTTCTCCGAACGAAACGGAAGATGCCGACATCGTGTCCGAAGGCCTCATCACTCACAACGCCATCGAAGAGGGGCAGATGGTTGTCTCTGATGAGTGCGTGTCCAACGCCAACCGCGATCCAATCACCATGGAGATCGACGAGCTCTACAGCATCTACGAGGACCTGGACCTGGACATGGACCTGGACCTGGACACCGTGCGCTTTCTCGAGGATAATGGCTGGCCTGTGAACCCCAGCTCTTTTCAACTGGTCCCGGCGTCGTCAACGGAGGCGGTGGCGGCGGCGGCGGCGGCTAATGATGTCGACGGTGTTGCGAATTCTCAAGTGTCGTGCTTCATGGCTTGGAAGAGCGCGAAGTCAAACGAGATGGCTGTGCCGGTCGTCACCGGTATAGAGTCACAGAAGTTGCTGAAGAAAGTTGTGGACTGTGGTGCACGGATGAGCACTGGTCGTGGTAGTAGAGCAGCGCTAACTCAAGAGAGTGGCATCAAGAACCATGTCATATCAGAGAGAAGGCGCCGAGAGAAGCTCAATGAGATGTTCCTGATTCTGAAGTCAATAGTCCCCTCCATCCACAAGGTGGACAAAGCATCCATCCTTGAAGAAACGATTGCCTACCTCAAAGTGTTGGAGAAAAGGGTGAAAGAGTTGGAGTCCAGCAGCGAGCCATCACATCAGCGCGCAACCGAAACAGGACAGCAAAGGCGCTGTGAGATCACCGGGAAGGAGCTGGTCTCTGAGATCGGTGTCAGCGGCGGCGGCGATGCAGGGAGAGAACACCACCACGTGAATGTCACCGTCACGGACAAGGTGGTTCTCCTGGAGGTGCAGTGCCGATGGAAGGAGTTGGTGATGACACGAGTGTTCGACGCGATCAAGAGCCTCTGTCTTGACGTTCTCTCCGTGCAGGCGTCGGCACCGGATGGTCTTCTTGGACTGAAGATACAAGCTAAGTTTGCTTGTTCTGGTTCAGTGGCACCTGGGATGATCAGCGAAGCTCTCCAGAAAGCTATCGGTGGCTAGCGTCGAGAGCGGCACACGTACGTTAGATGAATTTGAAATGCAAGAAGCAGAAGCAGAAGTGCAGAACTACAATACGATCCTCGTGAAATTTTATTTATTATATGCTCGCTGGTCCAGAAAAATATTTGTTTCGGAAGATAGCTTCAATCACATCCTC]

[+] EMBL AK111704             [CAGAAGAGTGAACTTGGATAGTTGGCAGCTAGAGCAGCCAGCTAGCTAGCTGGAGTCCTTCTTGCATTGGTGGGCAGACTGGAAAGAGAAATTAAACAGCTAGATAGGTTTCTAGACTTGTGTGGTGATGGCATCTGCTCCTCCAGTTCAGGAAGAACCCCTACAGCCAGGGACGAACCACTTCAGGAGCCTGCTTGCTGCTGCTGTGAGGAGCATCAGTTGGAGTTATGCGATCTTTTGGTCCATTTCAACCAGTTGCCCAGGAGTTTTGACTTGGAATGATGGGTTCTACAACGGCGTGGTAAAGACGAGGAAGATATCCAACTCAGCAGACCTCACGGCTGGTCAGCTCGTCGTGCAGAGAAGCGAGCAACTGAGGGAGCTTTACTACTCTCTCCTGTCCGGCGAGTGCGACCACCGGGCGAGGAGGCCCATTGCCGCGCTATCGCCGGAAGATCTCGCAGACACAGAATGGTACTACGTCGTCTGCATGACCTACTCCTTCCAACCCGGCCAAGGGCTGCCAGGCAAAAGCTATGCAAGCAATGCATCTGTTTGGCTGCGCAATGCTCAGTCTGCAGATAGCAAAACATTTCTACGCTCGCTATTAGCTAAGAGCGCGTCTATTCAGACAATCATCTGCATCCCCTTCACGAGTGGCGTGCTTGAGCTGGGGACCACTGATCCGGTTTTGGAGGACCCAAAGTTGGTAAACCGAATCGTTGCATATTTCCAGGAGCTTCAGTTTCCGATATGCTTAGAGGTACTAATGAGCACTAGCCCTTCTCCGAACGAAACGGAAGATGCCGACATCGTGTCCGAAGGCCTCATCACTCACAACGCCATCGAAGAGGGGCAGATGGTTGTCTCTGATGAGTGCGTGTCCAACGCCAACCGCGATCCAATCACCATGGAGATCGACGAGCTCTACAGCATCTACGAGGACCTGGACCTGGACATGGACCTGGACCTGGACACCGTGCGCTTTCTCGAGGATAATGGCTGGCCTGTGAACCCCAGCTCTTTTCAACTGGTCCCGGCGTCGTCAACGGAGGCGGTGGCGGCGGCGGCGGCGGCTAATGATGTCGACGGTGTTGCGAATTCTCAAGTGTCGTGCTTCATGGCTTGGAAGAGCGCGAAGTCAAACGAGATGGCTGTGCCGGTCGTCACCGGTATAGAGTCACAGAAGTTGCTGAAGAAAGTTGTGGACTGTGGTGCACGGATGAGCACTGGTCGTGGTAGTAGAGCAGCGCTAACTCAAGAGAGTGGCATCAAGAACCATGTCATATCAGAGAGAAGGCGCCGAGAGAAGCTCAATGAGATGTTCCTGATTCTGAAGTCAATAGTCCCCTCCATCCACAAGGTGGACAAAGCATCCATCCTTGAAGAAACGATTGCCTACCTCAAAGTGTTGGAGAAAAGGGTGAAAGAGTTGGAGTCCAGCAGCGAGCCATCACATCAGCGCGCAACCGAAACAGGACAGCAAAGGCGCTGTGAGATCACCGGGAAGGAGCTGGTCTCTGAGATCGGTGTCAGCGGCGGCGGCGATGCAGGGAGAGAACACCACCACGTGAATGTCACCGTCACGGACAAGGTGGTTCTCCTGGAGGTGCAGTGCCGATGGAAGGAGTTGGTGATGACACGAGTGTTCGACGCGATCAAGAGCCTCTGTCTTGACGTTCTCTCCGTGCAGGCGTCGGCACCGGATGGTCTTCTTGGACTGAAGATACAAGCTAAGTTTGCTTGTTCTGGTTCAGTGGCACCTGGGATGATCAGCGAAGCTCTCCAGAAAGCTATCGGTGGCTAGCGTCGAGAGCGGCACACGTACGTTAGATGAATTTGAAATGCAAGAAGCAGAAGCAGAAGTGCAGAACTACAATACGATCCTCGTGAAATTTTATTTATTATATGCTCGCTGGTCCAGAAAAATATTTGTTTCGGAAGATAGCTTCAATCACATCCTC]


>consensus_217#0 CAGAAGAGTGAACTTGGATAGTTGGCAGCTAGAGCAGCCAGCTAGCTAGCTGGAGTCCTT CTTGCATTGGTGGGCAGACTGGAAAGAGAAATTAAACAGCTAGATAGGTTTCTAGACTTG TGTGGTGATGGCATCTGCTCCTCCAGTTCAGGAAGAACCCCTACAGCCAGGGACGAACCA CTTCAGGAGCCTGCTTGCTGCTGCTGTGAGGAGCATCAGTTGGAGTTATGCGATCTTTTG GTCCATTTCAACCAGTTGCCCAGGAGTTTTGACTTGGAATGATGGGTTCTACAACGGCGT GGTAAAGACGAGGAAGATATCCAACTCAGCAGACCTCACGGCTGGTCAGCTCGTCGTGCA GAGAAGCGAGCAACTGAGGGAGCTTTACTACTCTCTCCTGTCCGGCGAGTGCGACCACCG GGCGAGGAGGCCCATTGCCGCGCTATCGCCGGAAGATCTCGCAGACACAGAATGGTACTA CGTCGTCTGCATGACCTACTCCTTCCAACCCGGCCAAGGGCTGCCAGGCAAAAGCTATGC AAGCAATGCATCTGTTTGGCTGCGCAATGCTCAGTCTGCAGATAGCAAAACATTTCTACG CTCGCTATTAGCTAAGAGCGCGTCTATTCAGACAATCATCTGCATCCCCTTCACGAGTGG CGTGCTTGAGCTGGGGACCACTGATCCGGTTTTGGAGGACCCAAAGTTGGTAAACCGAAT CGTTGCATATTTCCAGGAGCTTCAGTTTCCGATATGCTTAGAGGTACTAATGAGCACTAG CCCTTCTCCGAACGAAACGGAAGATGCCGACATCGTGTCCGAAGGCCTCATCACTCACAA CGCCATCGAAGAGGGGCAGATGGTTGTCTCTGATGAGTGCGTGTCCAACGCCAACCGCGA TCCAATCACCATGGAGATCGACGAGCTCTACAGCATCTACGAGGACCTGGACCTGGACAT GGACCTGGACCTGGACACCGTGCGCTTTCTCGAGGATAATGGCTGGCCTGTGAACCCCAG CTCTTTTCAACTGGTCCCGGCGTCGTCAACGGAGGCGGTGGCGGCGGCGGCGGCGGCTAA TGATGTCGACGGTGTTGCGAATTCTCAAGTGTCGTGCTTCATGGCTTGGAAGAGCGCGAA GTCAAACGAGATGGCTGTGCCGGTCGTCACCGGTATAGAGTCACAGAAGTTGCTGAAGAA AGTTGTGGACTGTGGTGCACGGATGAGCACTGGTCGTGGTAGTAGAGCAGCGCTAACTCA AGAGAGTGGCATCAAGAACCATGTCATATCAGAGAGAAGGCGCCGAGAGAAGCTCAATGA GATGTTCCTGATTCTGAAGTCAATAGTCCCCTCCATCCACAAGGTGGACAAAGCATCCAT CCTTGAAGAAACGATTGCCTACCTCAAAGTGTTGGAGAAAAGGGTGAAAGAGTTGGAGTC CAGCAGCGAGCCATCACATCAGCGCGCAACCGAAACAGGACAGCAAAGGCGCTGTGAGAT CACCGGGAAGGAGCTGGTCTCTGAGATCGGTGTCAGCGGCGGCGGCGATGCAGGGAGAGA ACACCACCACGTGAATGTCACCGTCACGGACAAGGTGGTTCTCCTGGAGGTGCAGTGCCG ATGGAAGGAGTTGGTGATGACACGAGTGTTCGACGCGATCAAGAGCCTCTGTCTTGACGT TCTCTCCGTGCAGGCGTCGGCACCGGATGGTCTTCTTGGACTGAAGATACAAGCTAAGTT TGCTTGTTCTGGTTCAGTGGCACCTGGGATGATCAGCGAAGCTCTCCAGAAAGCTATCGG TGGCTAGCGTCGAGAGCGGCACACGTACGTTAGATGAATTTGAAATGCAAGAAGCAGAAG CAGAAGTGCAGAACTACAATACGATCCTCGTGAAATTTTATTTATTATATGCTCGCTGGT CCAGAAAAATATTTGTTTCGGAAGATAGCTTCAATCACATCCTC



consensusID : consensus_217#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1771
fasta sequence
                              [GGACAGAGAAATTAAACAGTTAAGTTCTAGATTTCTATCGTGGTGATGGCATCTGCTCCTCCAGTTCAGGAAGAAGCCCTACAGCCAGGGACGAACCACTTCAGGAGCCGGCTTGCTGCTGCTGTGAGGAGCATCAGTTGGAGTTACACCATCTTTTGGTCCACTTCAACCAGTCTCCCGGGAGTTCTGACTTGGAACGATGGATTCTACAACGGCGAGGTAAAGACGAGGAAGATATCCAACTTAGAGGACCTCACCGCTGACCAGCTCGTCCTGCGGAGAAGCGAGCAACTGAGCGAGCTCTACTACTCTCTCCTGTCCGGCGAGTGCGACCACCGGGCAAGGAAGCCCGTCGCCGCACTGTCGCCGGAAGATATCGCGGACACAGAATGGTACTACGTTGTCTGCATGACATACGCCTTTCGACCCGGCCAAGGGTTACCCGGCAGAAGCTATGCAAGCAATCGATCTGTTTGGTTGTGCAATGCTCAGTCTGCAGATAGCAAAACCTTTCTACGTGCGCTCTTAGCGAAGAGCGCGTCTATTCAGACAATTGTCTGCATCCCCTTCATGAGTGGCGTGCTTGAGCTGGGAACCACTGATCCGGTTTCGGAGGACCCAAACTTGGTAAACCGAATCGTTGCATATTTGAAGGAGCTTCAGTTTCCGATATGCTTAGAGGTACCGAGTTCTACTCCTTCTCCAGACGAAACAGAAGATGCCGACACCGTGTTCGATGGCCTCATTGAAGAGGACCAGATGGTCATACTCCAGGGAGAAGACGAGCTAGGCGACGTCGTCGTCGCTGAGTGCGAGACCAACGGCGCCAACCCCGAAACGATCACCATGGAGACCGACGAGTTCTACAGCCTCTGCGAGGAGCTGGACCTGGACCTCGGTTCTTATCAGCTAGTCCCGACGTCGGCACGGGAGACGGTGGCTGCGGCGGCGGCGGCGGCTAACGATGTCGACGGCGTTGCATACTCTCACGCCTCGTGTTTCGTGTCATGGAAAAGAGCGAACCCGGCGGAGAAGGTGGTGGCCGTGCCGATGACTGCAGGCATAGAGTCACAGAAGTTGCTGAAGAAAGCTGTAGGCGGCGGCACCGCATGGATGAGTAATATTGATGATCGTGGTAGCGTGGCAATAACGACGACTCCAGGAAGTAACATCAAGAGCCATGTCATGTCAGAGAGAAGGCGCCGAGAGAAGCTCAACGAGATGTTCCTCATTCTGAAGTCACTACTCCCCTCCGTCCGCAAGGTTGACAAGGCATCCATACTTGCAGAAACGATAACCTACCTCAAAGTGTTAGAGAAAAGAGTGAAAGAGCTGGAGTCCAGCAGCAGGGAGCCATCGCGTTGGCGCCCAACCGAAATTGGACAGGGGAAGGCGCCGTAAGATCACCGGGAAGGAGGTCTATGAGATCGGTGTCAGTGGTGGTACCTCGTCGGTACCTCGTCAACACCGTACGTATATGATATGCATGTATAAGATCACCGGGCAGGAGGTCTCTGAGATGGATGTCATACGGTGTTGACGAGGTACCGTACGTATGATATATAGTTATCGTTTTCATTATGGAAAAAAAATTCCGAATTACCTCGTGTACTATAAAAGACGCGAATATTAGGGAAGAATCTAATATCAAATAATTAGAAGGGGTGAGGTTTCGAATCCAGGTCGTCTATCACACCACCTTGTGAAGCTAGCCGGAAAACCCCTAAGCGTTTTTTTACCTCCATGTACTATTGGTGCCATCTGAATTACC]

[+] EMBL AB021080             [GGACAGAGAAATTAAACAGTTAAGTTCTAGATTTCTATCGTGGTGATGGCATCTGCTCCTCCAGTTCAGGAAGAAGCCCTACAGCCAGGGACGAACCACTTCAGGAGCCGGCTTGCTGCTGCTGTGAGGAGCATCAGTTGGAGTTACACCATCTTTTGGTCCACTTCAACCAGTCTCCCGGGAGTTCTGACTTGGAACGATGGATTCTACAACGGCGAGGTAAAGACGAGGAAGATATCCAACTTAGAGGACCTCACCGCTGACCAGCTCGTCCTGCGGAGAAGCGAGCAACTGAGCGAGCTCTACTACTCTCTCCTGTCCGGCGAGTGCGACCACCGGGCAAGGAAGCCCGTCGCCGCACTGTCGCCGGAAGATATCGCGGACACAGAATGGTACTACGTTGTCTGCATGACATACGCCTTTCGACCCGGCCAAGGGTTACCCGGCAGAAGCTATGCAAGCAATCGATCTGTTTGGTTGTGCAATGCTCAGTCTGCAGATAGCAAAACCTTTCTACGTGCGCTCTTAGCGAAGAGCGCGTCTATTCAGACAATTGTCTGCATCCCCTTCATGAGTGGCGTGCTTGAGCTGGGAACCACTGATCCGGTTTCGGAGGACCCAAACTTGGTAAACCGAATCGTTGCATATTTGAAGGAGCTTCAGTTTCCGATATGCTTAGAGGTACCGAGTTCTACTCCTTCTCCAGACGAAACAGAAGATGCCGACACCGTGTTCGATGGCCTCATTGAAGAGGACCAGATGGTCATACTCCAGGGAGAAGACGAGCTAGGCGACGTCGTCGTCGCTGAGTGCGAGACCAACGGCGCCAACCCCGAAACGATCACCATGGAGACCGACGAGTTCTACAGCCTCTGCGAGGAGCTGGACCTGGACCTCGGTTCTTATCAGCTAGTCCCGACGTCGGCACGGGAGACGGTGGCTGCGGCGGCGGCGGCGGCTAACGATGTCGACGGCGTTGCATACTCTCACGCCTCGTGTTTCGTGTCATGGAAAAGAGCGAACCCGGCGGAGAAGGTGGTGGCCGTGCCGATGACTGCAGGCATAGAGTCACAGAAGTTGCTGAAGAAAGCTGTAGGCGGCGGCACCGCATGGATGAGTAATATTGATGATCGTGGTAGCGTGGCAATAACGACGACTCCAGGAAGTAACATCAAGAGCCATGTCATGTCAGAGAGAAGGCGCCGAGAGAAGCTCAACGAGATGTTCCTCATTCTGAAGTCACTACTCCCCTCCGTCCGCAAGGTTGACAAGGCATCCATACTTGCAGAAACGATAACCTACCTCAAAGTGTTAGAGAAAAGAGTGAAAGAGCTGGAGTCCAGCAGCAGGGAGCCATCGCGTTGGCGCCCAACCGAAATTGGACAGGGGAAGGCGCCGTAAGATCACCGGGAAGGAGGTCTATGAGATCGGTGTCAGTGGTGGTACCTCGTCGGTACCTCGTCAACACCGTACGTATATGATATGCATGTATAAGATCACCGGGCAGGAGGTCTCTGAGATGGATGTCATACGGTGTTGACGAGGTACCGTACGTATGATATATAGTTATCGTTTTCATTATGGAAAAAAAATTCCGAATTACCTCGTGTACTATAAAAGACGCGAATATTAGGGAAGAATCTAATATCAAATAATTAGAAGGGGTGAGGTTTCGAATCCAGGTCGTCTATCACACCACCTTGTGAAGCTAGCCGGAAAACCCCTAAGCGTTTTTTTACCTCCATGTACTATTGGTGCCATCTGAATTACC]


>consensus_217#1 GGACAGAGAAATTAAACAGTTAAGTTCTAGATTTCTATCGTGGTGATGGCATCTGCTCCT CCAGTTCAGGAAGAAGCCCTACAGCCAGGGACGAACCACTTCAGGAGCCGGCTTGCTGCT GCTGTGAGGAGCATCAGTTGGAGTTACACCATCTTTTGGTCCACTTCAACCAGTCTCCCG GGAGTTCTGACTTGGAACGATGGATTCTACAACGGCGAGGTAAAGACGAGGAAGATATCC AACTTAGAGGACCTCACCGCTGACCAGCTCGTCCTGCGGAGAAGCGAGCAACTGAGCGAG CTCTACTACTCTCTCCTGTCCGGCGAGTGCGACCACCGGGCAAGGAAGCCCGTCGCCGCA CTGTCGCCGGAAGATATCGCGGACACAGAATGGTACTACGTTGTCTGCATGACATACGCC TTTCGACCCGGCCAAGGGTTACCCGGCAGAAGCTATGCAAGCAATCGATCTGTTTGGTTG TGCAATGCTCAGTCTGCAGATAGCAAAACCTTTCTACGTGCGCTCTTAGCGAAGAGCGCG TCTATTCAGACAATTGTCTGCATCCCCTTCATGAGTGGCGTGCTTGAGCTGGGAACCACT GATCCGGTTTCGGAGGACCCAAACTTGGTAAACCGAATCGTTGCATATTTGAAGGAGCTT CAGTTTCCGATATGCTTAGAGGTACCGAGTTCTACTCCTTCTCCAGACGAAACAGAAGAT GCCGACACCGTGTTCGATGGCCTCATTGAAGAGGACCAGATGGTCATACTCCAGGGAGAA GACGAGCTAGGCGACGTCGTCGTCGCTGAGTGCGAGACCAACGGCGCCAACCCCGAAACG ATCACCATGGAGACCGACGAGTTCTACAGCCTCTGCGAGGAGCTGGACCTGGACCTCGGT TCTTATCAGCTAGTCCCGACGTCGGCACGGGAGACGGTGGCTGCGGCGGCGGCGGCGGCT AACGATGTCGACGGCGTTGCATACTCTCACGCCTCGTGTTTCGTGTCATGGAAAAGAGCG AACCCGGCGGAGAAGGTGGTGGCCGTGCCGATGACTGCAGGCATAGAGTCACAGAAGTTG CTGAAGAAAGCTGTAGGCGGCGGCACCGCATGGATGAGTAATATTGATGATCGTGGTAGC GTGGCAATAACGACGACTCCAGGAAGTAACATCAAGAGCCATGTCATGTCAGAGAGAAGG CGCCGAGAGAAGCTCAACGAGATGTTCCTCATTCTGAAGTCACTACTCCCCTCCGTCCGC AAGGTTGACAAGGCATCCATACTTGCAGAAACGATAACCTACCTCAAAGTGTTAGAGAAA AGAGTGAAAGAGCTGGAGTCCAGCAGCAGGGAGCCATCGCGTTGGCGCCCAACCGAAATT GGACAGGGGAAGGCGCCGTAAGATCACCGGGAAGGAGGTCTATGAGATCGGTGTCAGTGG TGGTACCTCGTCGGTACCTCGTCAACACCGTACGTATATGATATGCATGTATAAGATCAC CGGGCAGGAGGTCTCTGAGATGGATGTCATACGGTGTTGACGAGGTACCGTACGTATGAT ATATAGTTATCGTTTTCATTATGGAAAAAAAATTCCGAATTACCTCGTGTACTATAAAAG ACGCGAATATTAGGGAAGAATCTAATATCAAATAATTAGAAGGGGTGAGGTTTCGAATCC AGGTCGTCTATCACACCACCTTGTGAAGCTAGCCGGAAAACCCCTAAGCGTTTTTTTACC TCCATGTACTATTGGTGCCATCTGAATTACC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_217#0      CAGAAGAGTGAACTTGGATAGTTGGCAGCTAGAGCAGCCAGCTAGCTAGCTGGAGTCCTT 60
consensus_217#1      ------------------------------------------------------------
                                                                                 

consensus_217#0      CTTGCATTGGTGGGCAGACTGGAAAGAGAAATTAAACAGCTAGATAGGTTTCTAGACTTG 120
consensus_217#1      --------------------GGACAGAGAAATTAAACAGTTAAGT-----TCTAGATTTC 35
                                         *** *************** **  *     ****** ** 

consensus_217#0      T---GTGGTGATGGCATCTGCTCCTCCAGTTCAGGAAGAACCCCTACAGCCAGGGACGAA 177
consensus_217#1      TATCGTGGTGATGGCATCTGCTCCTCCAGTTCAGGAAGAAGCCCTACAGCCAGGGACGAA 95
                     *   ************************************ *******************

consensus_217#0      CCACTTCAGGAGCCTGCTTGCTGCTGCTGTGAGGAGCATCAGTTGGAGTTATGCGATCTT 237
consensus_217#1      CCACTTCAGGAGCCGGCTTGCTGCTGCTGTGAGGAGCATCAGTTGGAGTTACACCATCTT 155
                     ************** ************************************  * *****

consensus_217#0      TTGGTCCATTTCAACCAGTTGCCCAGGAGTTTTGACTTGGAATGATGGGTTCTACAACGG 297
consensus_217#1      TTGGTCCACTTCAACCAGTCTCCCGGGAGTTCTGACTTGGAACGATGGATTCTACAACGG 215
                     ******** **********  *** ****** ********** ***** ***********

consensus_217#0      CGTGGTAAAGACGAGGAAGATATCCAACTCAGCAGACCTCACGGCTGGTCAGCTCGTCGT 357
consensus_217#1      CGAGGTAAAGACGAGGAAGATATCCAACTTAGAGGACCTCACCGCTGACCAGCTCGTCCT 275
                     ** ************************** **  ******** ****  ********* *

consensus_217#0      GCAGAGAAGCGAGCAACTGAGGGAGCTTTACTACTCTCTCCTGTCCGGCGAGTGCGACCA 417
consensus_217#1      GCGGAGAAGCGAGCAACTGAGCGAGCTCTACTACTCTCTCCTGTCCGGCGAGTGCGACCA 335
                     ** ****************** ***** ********************************

consensus_217#0      CCGGGCGAGGAGGCCCATTGCCGCGCTATCGCCGGAAGATCTCGCAGACACAGAATGGTA 477
consensus_217#1      CCGGGCAAGGAAGCCCGTCGCCGCACTGTCGCCGGAAGATATCGCGGACACAGAATGGTA 395
                     ****** **** **** * ***** ** ************ **** **************

consensus_217#0      CTACGTCGTCTGCATGACCTACTCCTTCCAACCCGGCCAAGGGCTGCCAGGCAAAAGCTA 537
consensus_217#1      CTACGTTGTCTGCATGACATACGCCTTTCGACCCGGCCAAGGGTTACCCGGCAGAAGCTA 455
                     ****** *********** *** **** * ************* * ** **** ******

consensus_217#0      TGCAAGCAATGCATCTGTTTGGCTGCGCAATGCTCAGTCTGCAGATAGCAAAACATTTCT 597
consensus_217#1      TGCAAGCAATCGATCTGTTTGGTTGTGCAATGCTCAGTCTGCAGATAGCAAAACCTTTCT 515
                     **********  ********** ** **************************** *****

consensus_217#0      ACGCTCGCTATTAGCTAAGAGCGCGTCTATTCAGACAATCATCTGCATCCCCTTCACGAG 657
consensus_217#1      ACGTGCGCTCTTAGCGAAGAGCGCGTCTATTCAGACAATTGTCTGCATCCCCTTCATGAG 575
                     ***  **** ***** ***********************  *************** ***

consensus_217#0      TGGCGTGCTTGAGCTGGGGACCACTGATCCGGTTTTGGAGGACCCAAAGTTGGTAAACCG 717
consensus_217#1      TGGCGTGCTTGAGCTGGGAACCACTGATCCGGTTTCGGAGGACCCAAACTTGGTAAACCG 635
                     ****************** **************** ************ ***********

consensus_217#0      AATCGTTGCATATTTCCAGGAGCTTCAGTTTCCGATATGCTTAGAGGTACTAATGAGCAC 777
consensus_217#1      AATCGTTGCATATTTGAAGGAGCTTCAGTTTCCGATATGCTTAGAGGTACC---GAGTTC 692
                     ***************  *********************************    ***  *

consensus_217#0      TAGCCCTTCTCCGAACGAAACGGAAGATGCCGACATCGTGTCCGAAGGCCTCATCACTCA 837
consensus_217#1      TACTCCTTCTCCAGACGAAACAGAAGATGCCGACACCGTGTTCGATGGCCT--------- 743
                     **  ********  ******* ************* ***** *** *****         

consensus_217#0      CAACGCCATCGAAGAGGGGCAGATGGTTGT-CTCTGATGAGTGCGTGTCCAACGCCAACC 896
consensus_217#1      ------CATTGAAGAGGACCAGATGGTCATACTCCAGGGAGAAGACGA-----GCTAG-- 790
                           *** *******  ********  * ***    ***     *      ** *   

consensus_217#0      GCGATCCAATCACCATGGAGATCGACGAGCTCTACAGCATCTACGAGGACCTGGACCTGG 956
consensus_217#1      GCGACGTCGTCGTCGCTGAGT---GCGAGACCAACGGCGCCAACCCCGAAACGATCAC-- 845
                     ****     **  *   ***     ****  * ** **  * **   **   *  *    

consensus_217#0      ACATGGACCTGGACCTGGACACCGTGCGCTTTCTCGAGGATAATGGCTGGCCTGTGAACC 1016
consensus_217#1      -CATGGAGACCGAC--GAGTTCTACA-GCCTCTGCGAGGA-----GCTGGACC-TGGACC 895
                      ******    ***  *    *     ** *   ******     ***** *  ** ***

consensus_217#0      CCAGCTCTTTTCAACTGGTCCCGGCGTCGTCAACGGAGGCGGTGGC---GGCGGCGGCGG 1073
consensus_217#1      TCGGTTCTTATCAGCTAGTCCCGACGTCGGCACGGGAGACGGTGGCTGCGGCGGCGGCGG 955
                      * * **** *** ** ****** ***** **  **** *******   ***********

consensus_217#0      CGGCTAATGATGTCGACGGTGTTGCGAATTCTCAAGTGTCGTGCTTCATGGCTTGGAAGA 1133
consensus_217#1      CGGCTAACGATGTCGACGGCGTTGCATACTCTCACGCCTCGTGTTTCGTGTCATGGAAAA 1015
                     ******* *********** *****  * ***** *  ***** *** ** * ***** *

consensus_217#0      GCGCGAAGTCAAACGAGA------TGGCTGTGCCGGTCGTCACCGGTATAGAGTCACAGA 1187
consensus_217#1      GAGCGAACCCGGCGGAGAAGGTGGTGGCCGTGCCGATGACTGCAGGCATAGAGTCACAGA 1075
                     * *****  *    ****      **** ****** *     * ** *************

consensus_217#0      AGTTGCTGAAGAAAGTTGTGGACTGTGGT---GCACGGATGAGCACT------GGTCGTG 1238
consensus_217#1      AGTTGCTGAAGAAAGCTGTAGGCGGCGGCACCGCATGGATGAGTAATATTGATGATCGTG 1135
                     *************** *** * * * **    *** ******* * *      * *****

consensus_217#0      GTAGTAGAGCAG---CGCTAACTCAAGAGAGTGGCATCAAGAACCATGTCATATCAGAGA 1295
consensus_217#1      GTAGCGTGGCAATAACGACGACTCCAGGAAGTAACATCAAGAGCCATGTCATGTCAGAGA 1195
                     ****    ***    **   **** **  ***  ******** ********* *******

consensus_217#0      GAAGGCGCCGAGAGAAGCTCAATGAGATGTTCCTGATTCTGAAGTCAATAGTCCCCTCCA 1355
consensus_217#1      GAAGGCGCCGAGAGAAGCTCAACGAGATGTTCCTCATTCTGAAGTCACTACTCCCCTCCG 1255
                     ********************** *********** ************ ** ******** 

consensus_217#0      TCCACAAGGTGGACAAAGCATCCATCCTTGAAGAAACGATTGCCTACCTCAAAGTGTTGG 1415
consensus_217#1      TCCGCAAGGTTGACAAGGCATCCATACTTGCAGAAACGATAACCTACCTCAAAGTGTTAG 1315
                     *** ****** ***** ******** **** *********  **************** *

consensus_217#0      AGAAAAGGGTGAAAGAGTTGGAGTCCAGCAGC---GAGCCATCACATCAGCGCGCAACCG 1472
consensus_217#1      AGAAAAGAGTGAAAGAGCTGGAGTCCAGCAGCAGGGAGCCATCGCGTTGGCGCCCAACCG 1375
                     ******* ********* **************   ******** * *  **** ******

consensus_217#0      AAACAGGACAGCA-AAGGCGCTGTGAGATCACCGGGAAGGAGCTGGTCTCTGAGATCGGT 1531
consensus_217#1      AAATTGGACAGGGGAAGGCGCCGTAAGATCACCGGGAAGGAG---GTCTATGAGATCGGT 1432
                     ***  ******   ******* ** *****************   **** **********

consensus_217#0      GTCAGCGGCGGCGGCGATGCAGGGAGAGAACACCACCACGTGAATGTCACCGTCACGGAC 1591
consensus_217#1      GTCAGTGGTGGTACCTCGTCGGTACCTCGTCAACACCGTACGTATATGATATGCATGTAT 1492
                     ***** ** **   *    * *        ** ****    * ** * *    ** * * 

consensus_217#0      AAGGTGGTTCTCCTGGAGGTGCAGTGCCGATGGAAGGAGT-TGGTGATGACACGAGTGTT 1650
consensus_217#1      AAGATCACCGGGCAGGAGGT-CTCTGA-GATGGATGTCATACGGTGTTGACGAG-GTACC 1549
                     *** *       * ****** *  **  ****** *   *  **** ****  * **   

consensus_217#0      CGACGCGATCAAGAGCCTCTGTCTTGACGTTCTCTCCGTGCAGGCGTCGGCACCGGATGG 1710
consensus_217#1      GTACGT----ATGATATATAGTTAT--CGTTTTCATTATGGAAAAAA-AATTCCGAATTA 1602
                       ***     * **      **  *  **** **    ** *          *** **  

consensus_217#0      TCTTCTTGGACTGAAGATACAAGCTAAGTTTGCTTGTTCTGGTTCAGTGGCACCTGGGAT 1770
consensus_217#1      CCT-CGTGTACTATAAA-AGACGCGAA-------TATTAGGGAAGAATCTAATATCAAAT 1653
                      ** * ** ***  * * * * ** **       * **  **   * *   *  *   **

consensus_217#0      GATCAGCGAAGCTCTCCAGAAAGCTATCGGTGGCTAGCGTCGAGAGCGGCACACGTACGT 1830
consensus_217#1      AATTAGAAGGGGT-------GAGGTTTCGA-ATCCAG-GTCGTCTATCACAC---CACCT 1701
                      ** **    * *        ** * ***    * ** ****       ***    ** *

consensus_217#0      TAGATGAATTTGAAATGCAAGAAGCAGAAGCAGAAGTGCAGAACTACAATACGATCCTCG 1890
consensus_217#1      T--GTGAAGCT-AGCCGGAAAACCCCTAAGCGT---TTTTTTACCTCCATGTACTATTGG 1755
                     *   ****  * *   * ** *  *  ****     *     **  * **    *  * *

consensus_217#0      TGAAATTTTATTTATTATATGCTCGCTGGTCCAGAAAAATATTTGTTTCGGAAGATAGCT 1950
consensus_217#1      TGCCATCTGAATTACC-------------------------------------------- 1771
                     **  ** * * ***                                              

consensus_217#0      TCAATCACATCCTC 1964
consensus_217#1      --------------
                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)