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Oryza sativa
cluster # 2211 cluster # 2211       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2211#0 length = 1674 sequences # 2  

consensusID : consensus_2211#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1674
fasta sequence
                              [CGGAATTCTCGGCGTGGAGCCCGCACTCGCCGGTGAACCTCCTCTCACCAGAGCTGGCCGCCGGCGAGGTCGTGGCTGGCGGAGCTGGCCACGAGGCGCCGGATCTGGCCGAGCTCAAGGCATGGCTGCGGCAGCTGGTCCCGCGAGTCAATGACCGGTGGGACCAACTAGTTAGCCTTGTGTGTGTTTTGCGCTCGCGGCCGCCGCTATTTTATTCGGACGACGACGGTTTCCGCCGCCGCCGCCGCCTGCTCAAACCCATCGGAGAGCAAACCGAATGGAGCTCCACCTCACCTCCCGCGGCGCCCTCCCGCTGTCTCCGCCGCTCGCCGGCCAGCGGCGTCCTCACCTCTCTCTCTCCACGCCGTCGCTTCCGATCAAGAATCACACTTATTCAGTGCCACCTCCTTTCTCCAAGGCTCACTGCGCGATAGGATGCCAAGCTTCTCTAGCAACTAACTACATGGAAACCTCTGCGGTGGCTGATTTGGACTGGGAGAACCTCGGTTTTGGCCTTGTCCAGACAGATTTTATGTATATTGCAAAATGCGGGCCAGATGGGAACTTTTCCAAAGGAGAAATGGTACCATTTGGACCTATAGAACTGAGCCCATCTGCTGGAGTCTTAAATTATGGACAGGGCTTGTTTGAGGGCTTAAAGGCATATAAGAAAACCGATGGATACATTCTGCTGTTTCGTCCGGAGGAG-ATGCCATAAGGATGAGAAAT-GTGCAGAGAGGATGTGGATGCCTGCACC-ACTCTTG-ACAA-TTGGGGAT-CAGTAAAGCAAACCGTTTTGGCAAATAAAAGATGGGTGCCCCCAACCGGTAAAGGCTCCCTGTATATAAGGCCGCTGCTTATGGGAAGTGGAGCTGTCCTTGGTCTTGCACCTGCTCCTGAGTATACCTTTATGATTTTTGTCTCCCCTGTTGGGAACTATTTCAAGGAAGGTTTAGCCCCTATTAACTTGATTATAGAAGAAAACTTTCACCGTGCTGCCCCTGGTGGAACTGGCGGAGTGAAAACCATTGGAAACTATGCCTCGGTATTAAAAGCACAGAGGATTGCAAAACAGAAAGGATATTCAGATGTCCTCTATCTAGATGCCGTTCACAAGAAATATCTGGAAGAAGTGTCTTCGTGCAATATCTTTATTGTGAAAGGCAATGTTATTTCTACTCCAGCAATAAAAGGAACCATACTGCCTGGTATAACAAGGAAAAGTATTCTTGAAGTTGCTCAGAGAAAAGGCTTCATGGTTGAGGAGCGCCTTGTGTCAGTGGATGAGCTTCTTGAAGCTGATGAAGTTTTCTGCACGGGAACAGCTGTTGTGGTGTCCCCTGTGGGGAGCATAACTTATCTGGGGCAAAGGGTGGAATATGGCAACCAAGGAGTGGGCGTGGTGTGTCAGCAGCTGTATACTTCACTTACAAGCCTCCAGATGGGTCATGTGGACGATTGTATGGGCTGGACTGTGGAACTAAACCAGTGATCATGTACCTCCCTTCTCGCTGTATACGTTGGGGGTATTTGGCGCATTGATCCGATAATAATGCAAAATAATAAAAAATGTTGTTCTTTTTATGGTCAGAACAAATTCCCCATATACTATTAGTCCTGTGCTCCTGAAGTTCTGATCACAAGAACAGTGTGCTAATGTATCCTGTTATCACAAAA]

[+] EMBL BE041009             [CGGAATTCTCGGCGTGGAGCCCGCACTCGCCGGTGAACCTCCTCTCACCAGAGCTGGCCGCCGGCGAGGTCGTGGCTGGCGGAGCTGGCCACGAGGCGCCGGATCTGGCCGAGCTCAAGGCATGGCTGCGGCAGCTGGTCCCGCGAGTCAATGACCGGTGGGACCAACTAGTTAGCCTTGTGTGTGTTTTGCGCTCGCGGCCGCCGCTATTTTATTCGGACGACGACGGTTTCCGCCGCCGCCGCCGCCTGCTCAAACCCATCGGAGAGCAAACCGAATGGAGCTCCACCTCACCTCCCGCGGCGCCCTCCCGCTGTCTCCGCCGCTCGCCGGCCAGCGGCGTCCTCACCTCTCTCTCTCCACGCCGTCGCTTCCGATCAAGAATCACACTTATTCAGTGCCACCTCCTTTCTCCAAGGCTCACTGCGCGATAGGATGCCAAGCTTCTCTAGCAACTAACTACATGGAAACCTCTGCGGTGGCTGATTTGGACTGGGAGAACCTCGGTTTTGGCCTTGTCCAGACAGATTTTATGTATATTGCAAAATGCGGGCCAGATGGGAACTTTTCCAAAGGAGAAATGGTACCATTTGGACCTATAGAACTGAGCCCATCTGCTGGAGTCTTAAATTATGGACAGGGCTTGTTTGAGGGCTTAAAGGCATATAAGAAAACCGATGGATACATTCTGCTGTTTCGTCCGGAGGAG ATGCCATAAGGATGAGAAAT GTGCAGAGAGGATGTGGATGCCTGCACC ACTCTTG ACAA TTGGGGAT CAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK108687             [                                                                                                                                                                                                                                   gtcTTCGCCCCCCGCCGCCGCCTGCTCAAACCCATCGGAGAGCAAACCGAATGGAGCTCCACCTCACCTCCCGCGGCGCCCTCCCGCTGTCTCCGCCGCTCGCCGGCCAGCGGCGTCCTCACCTCTCTCTCTCCACGCCGTCGCTTCCGATCAAGAATCACACTTATTCAGTGCCACCTCCTTTCTCCAAGGCTCACTGCGCGATAGGATGCCAAGCTTCTCTAGCAACTAACTACATGGAAACCTCTGCGGTGGCTGATTTGGACTGGGAGAACCTCGGTTTTGGCCTTGTCCAGACAGATTTTATGTATATTGCAAAATGCGGGCCAGATGGGAACTTTTCCAAAGGAGAAATGGTACCATTTGGACCTATAGAACTGAGCCCATCTGCTGGAGTCTTAAATTATGGACAGGGCTTGTTTGAGGGCTTAAAGGCATATAGAAAAACAGATGGATACATTCTGCTGTTTCGTCCGGAGGAGAATGCCATAAGGATGAGAAATGGTGCAGAGAGGATGTGTATGCCTGCACCAACTCTTGAACAATTTGTGGATGCAGTAAAGCAAACCGTTTTGGCAAATAAAAGATGGGTGCCCCCAACCGGTAAAGGCTCCCTGTATATAAGGCCGCTGCTTATGGGAAGTGGAGCTGTCCTTGGTCTTGCACCTGCTCCTGAGTATACCTTTATGATTTTTGTCTCCCCTGTTGGGAACTATTTCAAGGAAGGTTTAGCCCCTATTAACTTGATTATAGAAGAAAACTTTCACCGTGCTGCCCCTGGTGGAACTGGCGGAGTGAAAACCATTGGAAACTATGCCTCGGTATTAAAAGCACAGAGGATTGCAAAACAGAAAGGATATTCAGATGTCCTCTATCTAGATGCCGTTCACAAGAAATATCTGGAAGAAGTGTCTTCGTGCAATATCTTTATTGTGAAAGGCAATGTTATTTCTACTCCAGCAATAAAAGGAACCATACTGCCTGGTATAACAAGGAAAAGTATTCTTGAAGTTGCTCAGAGAAAAGGCTTCATGGTTGAGGAGCGCCTTGTGTCAGTGGATGAGCTTCTTGAAGCTGATGAAGTTTTCTGCACGGGAACAGCTGTTGTGGTGTCCCCTGTGGGGAGCATAACTTATCTGGGGCAAAGGGTGGAATATGGCAACCAAGGAGTGGGCGTGGTGTGTCAGCAGCTGTATACTTCACTTACAAGCCTCCAGATGGGTCATGTGGACGATTGTATGGGCTGGACTGTGGAACTAAACCAGTGATCATGTACCTCCCTTCTCGCTGTATACGTTGGGGGTATTTGGCGCATTGATCCGATAATAATGCAAAATAATAAAAAATGTTGTTCTTTTTATGGTCAGAACAAATTCCCCATATACTATTAGTCCTGTGCTCCTGAAGTTCTGATCACAAGAACAGTGTGCTAATGTATCCTGTTATCACAAAA]


>consensus_2211#0 CGGAATTCTCGGCGTGGAGCCCGCACTCGCCGGTGAACCTCCTCTCACCAGAGCTGGCCG CCGGCGAGGTCGTGGCTGGCGGAGCTGGCCACGAGGCGCCGGATCTGGCCGAGCTCAAGG CATGGCTGCGGCAGCTGGTCCCGCGAGTCAATGACCGGTGGGACCAACTAGTTAGCCTTG TGTGTGTTTTGCGCTCGCGGCCGCCGCTATTTTATTCGGACGACGACGGTTTCCGCCGCC GCCGCCGCCTGCTCAAACCCATCGGAGAGCAAACCGAATGGAGCTCCACCTCACCTCCCG CGGCGCCCTCCCGCTGTCTCCGCCGCTCGCCGGCCAGCGGCGTCCTCACCTCTCTCTCTC CACGCCGTCGCTTCCGATCAAGAATCACACTTATTCAGTGCCACCTCCTTTCTCCAAGGC TCACTGCGCGATAGGATGCCAAGCTTCTCTAGCAACTAACTACATGGAAACCTCTGCGGT GGCTGATTTGGACTGGGAGAACCTCGGTTTTGGCCTTGTCCAGACAGATTTTATGTATAT TGCAAAATGCGGGCCAGATGGGAACTTTTCCAAAGGAGAAATGGTACCATTTGGACCTAT AGAACTGAGCCCATCTGCTGGAGTCTTAAATTATGGACAGGGCTTGTTTGAGGGCTTAAA GGCATATAAGAAAACCGATGGATACATTCTGCTGTTTCGTCCGGAGGAGATGCCATAAGG ATGAGAAATGTGCAGAGAGGATGTGGATGCCTGCACCACTCTTGACAATTGGGGATCAGT AAAGCAAACCGTTTTGGCAAATAAAAGATGGGTGCCCCCAACCGGTAAAGGCTCCCTGTA TATAAGGCCGCTGCTTATGGGAAGTGGAGCTGTCCTTGGTCTTGCACCTGCTCCTGAGTA TACCTTTATGATTTTTGTCTCCCCTGTTGGGAACTATTTCAAGGAAGGTTTAGCCCCTAT TAACTTGATTATAGAAGAAAACTTTCACCGTGCTGCCCCTGGTGGAACTGGCGGAGTGAA AACCATTGGAAACTATGCCTCGGTATTAAAAGCACAGAGGATTGCAAAACAGAAAGGATA TTCAGATGTCCTCTATCTAGATGCCGTTCACAAGAAATATCTGGAAGAAGTGTCTTCGTG CAATATCTTTATTGTGAAAGGCAATGTTATTTCTACTCCAGCAATAAAAGGAACCATACT GCCTGGTATAACAAGGAAAAGTATTCTTGAAGTTGCTCAGAGAAAAGGCTTCATGGTTGA GGAGCGCCTTGTGTCAGTGGATGAGCTTCTTGAAGCTGATGAAGTTTTCTGCACGGGAAC AGCTGTTGTGGTGTCCCCTGTGGGGAGCATAACTTATCTGGGGCAAAGGGTGGAATATGG CAACCAAGGAGTGGGCGTGGTGTGTCAGCAGCTGTATACTTCACTTACAAGCCTCCAGAT GGGTCATGTGGACGATTGTATGGGCTGGACTGTGGAACTAAACCAGTGATCATGTACCTC CCTTCTCGCTGTATACGTTGGGGGTATTTGGCGCATTGATCCGATAATAATGCAAAATAA TAAAAAATGTTGTTCTTTTTATGGTCAGAACAAATTCCCCATATACTATTAGTCCTGTGC TCCTGAAGTTCTGATCACAAGAACAGTGTGCTAATGTATCCTGTTATCACAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)