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Oryza sativa
cluster # 2245 cluster # 2245       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2245#0 length = 1214 sequences # 2  

consensusID : consensus_2245#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1214
fasta sequence
                              [GTGCATACACTCATACAGCCCCTACCAATGGCTGAGAAAGAAGAATGCAAGGTGCTCATCGATCAAGCCAGCAACGAAGCTGGTGATCCACACCAAGACGACGACTGCGAAGACGAAGACGACGACGATAGCTCGAGCCTCATCCTGCTGACCAACCTCATCCTGAGCGGCACGGCGCGGCTCAACGTCCTCCTCCCCACCGCCACCATCCTCGCCTTCGCCATCTTCGCGCCCCTCCTCACCGACGACGGCAAGTGCACCCGCCTCAACCGCGCCCTCACCGGCGCCCTCATGCTCCTCTGCGCTGCCTCCTGCGTCTTCTTCACGCTCACCGACAGCTTCCGCTCCCCCACCGGCCGCCTCCGGTACGGCATCGCCACGACGAGCGGCATCCGCACGTTCTGCGTCGGCGGCCGGCGTCGCCGGCGGGGCGGCGGGAAGGCGGGGCCGTGGGAGCCGGAGAGGTACAGGCTGCGGTGGTCGGACCTCTTCCACACCGCCCTGGCCCTCGTCGCCTTCGTCACGTTCGCCGCGTCGCACCACGACATCGTGCTGTGCTACTACCCCGGCGTGCCCAGGAAGGTGGTGAACACGGTGCCCCTCGTGATCGGCTTCGTGGTCAGCCTCCTCTTCGTGCTCTTCCCGTCCAAGAGGAGGGGAATCGGGTACCCGTTCCTGCTCAGCACCGACCTTGTCTACCTACGCCGCTGATGAGACGAAAGGATCGCATGGTCTTCTGATGGATTTGTATTATGTGAAAGTTTGATTTTACATGGTTGTCTTGGGGTAATTTGAGCCAAAATGTATGTACATTCTTCATTGCCTCTCTCAAGTGAAGTACAAAGCGGGAAACAATGTGTGTTGGATGAGATATATATCAAGTAANTTTGTTTCAGGNTGCNTGTTAATGGTNTNGATNTNGTTCATTCTTNTGNGTCAGGTCCGGTCAAGCCCGCGATTTGTTCAGCGGTTCCACACAAATTTCNTCCAGTTGCCGCATTCCGCGATCACCCTGANTTTGGGGCGGATGTCAGGGAGAATGGCGAGGAANTGCAGNTCGGCCTTGGAGAGAACCTTGGCTTCCATGACCCAGACGACGAGGCCCTTGGCGTCCGGGTGCAGCAAGTTGAGCCTGTAGTCCACNTCCGGCGGGAAGTACCACNTCGCCACCGGCTGCTCCCGAGGCTCGGCGGGCAGACGGGNNGGATCTTGGT]

[+] EMBL AK108538             [GTGCATACACTCATACAGCCCCTACCAATGGCTGAGAAAGAAGAATGCAAGGTGCTCATCGATCAAGCCAGCAACGAAGCTGGTGATCCACACCAAGACGACGACTGCGAAGACGAAGACGACGACGATAGCTCGAGCCTCATCCTGCTGACCAACCTCATCCTGAGCGGCACGGCGCGGCTCAACGTCCTCCTCCCCACCGCCACCATCCTCGCCTTCGCCATCTTCGCGCCCCTCCTCACCGACGACGGCAAGTGCACCCGCCTCAACCGCGCCCTCACCGGCGCCCTCATGCTCCTCTGCGCTGCCTCCTGCGTCTTCTTCACGCTCACCGACAGCTTCCGCTCCCCCACCGGCCGCCTCCGGTACGGCATCGCCACGACGAGCGGCATCCGCACGTTCTGCGTCGGCGGCCGGCGTCGCCGGCGGGGCGGCGGGAAGGCGGGGCCGTGGGAGCCGGAGAGGTACAGGCTGCGGTGGTCGGACCTCTTCCACACCGCCCTGGCCCTCGTCGCCTTCGTCACGTTCGCCGCGTCGCACCACGACATCGTGCTGTGCTACTACCCCGGCGTGCCCAGGAAGGTGGTGAACACGGTGCCCCTCGTGATCGGCTTCGTGGTCAGCCTCCTCTTCGTGCTCTTCCCGTCCAAGAGGAGGGGAATCGGGTACCCGTTCCTGCTCAGCACCGACCTTGTCTACCTACGCCGCTGATGAGACGAAAGGATCGCATGGTCTTCTGATGGATTTGTATTATGTGAAAGTTTGATTTTACATGGTTGTCTTGGGGTAATTTGAGCCAAAATGTATGTACATTCTTCATTGCCTCTCTCAAGTGAAGTACAAAGCGGGAAACAATGTGTGTTGGATGAGATATATATCAAGTA                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL BE228600             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   gnATGNACATTNTTCATTGCCTTTNTCAAGTGAAGTACAAAGCGGGAAACAATATGTGTTGGATGAGATATATATCAAGTAANTTTGTTTCAGGNTGCNTGTTAATGGTNTNGATNTNGTTCATTCTTNTGNGTCAGGTCCGGTCAAGCCCGCGATTTGTTCAGCGGTTCCACACAAATTTCNTCCAGTTGCCGCATTCCGCGATCACCCTGANTTTGGGGCGGATGTCAGGGAGAATGGCGAGGAANTGCAGNTCGGCCTTGGAGAGAACCTTGGCTTCCATGACCCAGACGACGAGGCCCTTGGCGTCCGGGTGCAGCAAGTTGAGCCTGTAGTCCACNTCCGGCGGGAAGTACCACNTCGCCACCGGCTGCTCCCGAGGCTCGGCGGGCAGACGGGNNGGATCTTGGT]


>consensus_2245#0 GTGCATACACTCATACAGCCCCTACCAATGGCTGAGAAAGAAGAATGCAAGGTGCTCATC GATCAAGCCAGCAACGAAGCTGGTGATCCACACCAAGACGACGACTGCGAAGACGAAGAC GACGACGATAGCTCGAGCCTCATCCTGCTGACCAACCTCATCCTGAGCGGCACGGCGCGG CTCAACGTCCTCCTCCCCACCGCCACCATCCTCGCCTTCGCCATCTTCGCGCCCCTCCTC ACCGACGACGGCAAGTGCACCCGCCTCAACCGCGCCCTCACCGGCGCCCTCATGCTCCTC TGCGCTGCCTCCTGCGTCTTCTTCACGCTCACCGACAGCTTCCGCTCCCCCACCGGCCGC CTCCGGTACGGCATCGCCACGACGAGCGGCATCCGCACGTTCTGCGTCGGCGGCCGGCGT CGCCGGCGGGGCGGCGGGAAGGCGGGGCCGTGGGAGCCGGAGAGGTACAGGCTGCGGTGG TCGGACCTCTTCCACACCGCCCTGGCCCTCGTCGCCTTCGTCACGTTCGCCGCGTCGCAC CACGACATCGTGCTGTGCTACTACCCCGGCGTGCCCAGGAAGGTGGTGAACACGGTGCCC CTCGTGATCGGCTTCGTGGTCAGCCTCCTCTTCGTGCTCTTCCCGTCCAAGAGGAGGGGA ATCGGGTACCCGTTCCTGCTCAGCACCGACCTTGTCTACCTACGCCGCTGATGAGACGAA AGGATCGCATGGTCTTCTGATGGATTTGTATTATGTGAAAGTTTGATTTTACATGGTTGT CTTGGGGTAATTTGAGCCAAAATGTATGTACATTCTTCATTGCCTCTCTCAAGTGAAGTA CAAAGCGGGAAACAATGTGTGTTGGATGAGATATATATCAAGTAANTTTGTTTCAGGNTG CNTGTTAATGGTNTNGATNTNGTTCATTCTTNTGNGTCAGGTCCGGTCAAGCCCGCGATT TGTTCAGCGGTTCCACACAAATTTCNTCCAGTTGCCGCATTCCGCGATCACCCTGANTTT GGGGCGGATGTCAGGGAGAATGGCGAGGAANTGCAGNTCGGCCTTGGAGAGAACCTTGGC TTCCATGACCCAGACGACGAGGCCCTTGGCGTCCGGGTGCAGCAAGTTGAGCCTGTAGTC CACNTCCGGCGGGAAGTACCACNTCGCCACCGGCTGCTCCCGAGGCTCGGCGGGCAGACG GGNNGGATCTTGGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)