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Oryza sativa
cluster # 2306 cluster # 2306       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2306#0 length = 1865 sequences # 1  
consensus_2306#1 length = 1374 sequences # 1  

consensusID : consensus_2306#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1865
fasta sequence
                              [TTTGAGTAGGCCTTTTGAGCAACACTCATAATTCTATTAGTAGCAACTTTAGTAAAAATCTTAAAACTAACATTAAGTACAACATTAAGTACAGGCCTATATTGTTGAATTTTCATTGCCTCTACGCACTTGGGCAAAAGAATAATGGTACCATAGTTCAAAGAAGATAAAGGCAAACACCCACTATGAAAATCTTTAAAAAGTTCTAACAAGTCAACTTTAATAACATTCTTAAAAAAACATGATAAAACTTAGCAGGAAATCCATCAGAACCCGGTGCTTTGTTGTGTTCTATTTAGAAAATGGCCTCCTTAATTACTTTTTCAATAAACTCCTAAGTTAAAGCTTCATTCTCCAAAAGAGAAATTTGGGGAATATCAGCAATATTATTCTCCTTAGCTAGTAGTAAAAGGAAATAAGATCAGATACTGCTTGTGCTTGGAATACACGGAGTAGTACGATCGAAAACATTGTAGGAAGAAACCAGTTACATTGGAGATCAAGAAATGATTGAACACTAGCACTGTTCGAAGGCTAAAATTTTACTGCTCCGATGATAACACATCATCATCATCTTCATCGAAAAGCTCCAGGCATCCAGGGTAGCTTCCAAGTTTCTCCAGCACCTCGGCGAGCAGCGAGGGACATGAAGCCTTGAGCTCCCTGAACCCGTCGGTCGCCACCACAGTTGCCAGCATGCCAGGCGACGCGACGTACTCCATGCACACCGCCTTCAGCTGCGGGCCATCTCTCTGACGTCTTCCCTCCAGCAGCTGCTGGCGGCAGCTTCGCCGTCCTCGACGGGCGGCAACCTGTCCGTGTAGATGAACCGGAGCACGGCCTCGAAGACCGTCGGTTTCATGTCAAGGATGCGCACGTACCTGTCTCCGCCGCCGGTGTCCGCCATTGGGCCGAAGAACTGGGCGCGGAACACCGGCGACCGCGCCGAGAGCACCACCCTGTGCGCGTCGTAGTCGCTGCGCTCGACCTGAAAGGTCACGTCGCAGCCTTCCTTGCTCTCCAGAAGCTGCTCGAGATGACAGCAGATGGCTGGCGGCGGCACCGTGATGAAGCGGCTCATGGTTGCTCCGGTCTTCAACTCCTTGACAACCTCCACGTCGCAGTGCATCGTCAGGCAGTCGTTGATCAGGTACTCCGACTCCACGGTTTCTATCTCCATAAATTTCTGGTACCCCCATGTTTTGCTGCTAAGTGTGAAGTCGTTAAACTGGCCCCACGAGCTCGCGGTAGCGCCATTGACGCGGAATCTGAACCTTGCGGTAACTTTCTCTACCACAGTGCTTCCCAGCTCGAGGAACACGGACACGTGTCTTTCTTCTTCCTTTGTGCTGCCAGCAGGGTAGAATCGGATCGCCCAGCTGTATCCACCGACCTCGAATGAGCCGGACCTGACGAAGTGTCCGGTGCCGTTCCTCTTCTGCAGGCTGTAGCCGGCGACGGTGAACTCATGCGAGCCCTTGACAAGCTCAGTGGAGTGAGTGGACATGGTGGTGGTGTGCGGTGGGCTGGTGGTGGAAGACGCAGTTGAGGCGGCGGTGGCCATCGGAAGAGAAAGGAGATGCTGAATGCTTCCCGAGCTAGAGAACTCTCTTCGTAACTAGGGATGTTCACGCATACGGCATGTATACACACACTTGGCTAAGCTCTCGGAAGATGAACCATCTCAAGAGTAGTGGAGTAATTGTGAAGCATTCATGCGTGGAGTGGGATCGAGGGGCCGGGGTGGCTGGCTTACAGTATCCCATCGTTTTCTGGCATAATTTATCGTAGATCGATGGGTTGGAATGTTGAATAAATAGTACCGCATGTATTGGAGTATGTACTTAGAAATGATCATGTATATT]

[+] EMBL AK064448             [TTTGAGTAGGCCTTTTGAGCAACACTCATAATTCTATTAGTAGCAACTTTAGTAAAAATCTTAAAACTAACATTAAGTACAACATTAAGTACAGGCCTATATTGTTGAATTTTCATTGCCTCTACGCACTTGGGCAAAAGAATAATGGTACCATAGTTCAAAGAAGATAAAGGCAAACACCCACTATGAAAATCTTTAAAAAGTTCTAACAAGTCAACTTTAATAACATTCTTAAAAAAACATGATAAAACTTAGCAGGAAATCCATCAGAACCCGGTGCTTTGTTGTGTTCTATTTAGAAAATGGCCTCCTTAATTACTTTTTCAATAAACTCCTAAGTTAAAGCTTCATTCTCCAAAAGAGAAATTTGGGGAATATCAGCAATATTATTCTCCTTAGCTAGTAGTAAAAGGAAATAAGATCAGATACTGCTTGTGCTTGGAATACACGGAGTAGTACGATCGAAAACATTGTAGGAAGAAACCAGTTACATTGGAGATCAAGAAATGATTGAACACTAGCACTGTTCGAAGGCTAAAATTTTACTGCTCCGATGATAACACATCATCATCATCTTCATCGAAAAGCTCCAGGCATCCAGGGTAGCTTCCAAGTTTCTCCAGCACCTCGGCGAGCAGCGAGGGACATGAAGCCTTGAGCTCCCTGAACCCGTCGGTCGCCACCACAGTTGCCAGCATGCCAGGCGACGCGACGTACTCCATGCACACCGCCTTCAGCTGCGGGCCATCTCTCTGACGTCTTCCCTCCAGCAGCTGCTGGCGGCAGCTTCGCCGTCCTCGACGGGCGGCAACCTGTCCGTGTAGATGAACCGGAGCACGGCCTCGAAGACCGTCGGTTTCATGTCAAGGATGCGCACGTACCTGTCTCCGCCGCCGGTGTCCGCCATTGGGCCGAAGAACTGGGCGCGGAACACCGGCGACCGCGCCGAGAGCACCACCCTGTGCGCGTCGTAGTCGCTGCGCTCGACCTGAAAGGTCACGTCGCAGCCTTCCTTGCTCTCCAGAAGCTGCTCGAGATGACAGCAGATGGCTGGCGGCGGCACCGTGATGAAGCGGCTCATGGTTGCTCCGGTCTTCAACTCCTTGACAACCTCCACGTCGCAGTGCATCGTCAGGCAGTCGTTGATCAGGTACTCCGACTCCACGGTTTCTATCTCCATAAATTTCTGGTACCCCCATGTTTTGCTGCTAAGTGTGAAGTCGTTAAACTGGCCCCACGAGCTCGCGGTAGCGCCATTGACGCGGAATCTGAACCTTGCGGTAACTTTCTCTACCACAGTGCTTCCCAGCTCGAGGAACACGGACACGTGTCTTTCTTCTTCCTTTGTGCTGCCAGCAGGGTAGAATCGGATCGCCCAGCTGTATCCACCGACCTCGAATGAGCCGGACCTGACGAAGTGTCCGGTGCCGTTCCTCTTCTGCAGGCTGTAGCCGGCGACGGTGAACTCATGCGAGCCCTTGACAAGCTCAGTGGAGTGAGTGGACATGGTGGTGGTGTGCGGTGGGCTGGTGGTGGAAGACGCAGTTGAGGCGGCGGTGGCCATCGGAAGAGAAAGGAGATGCTGAATGCTTCCCGAGCTAGAGAACTCTCTTCGTAACTAGGGATGTTCACGCATACGGCATGTATACACACACTTGGCTAAGCTCTCGGAAGATGAACCATCTCAAGAGTAGTGGAGTAATTGTGAAGCATTCATGCGTGGAGTGGGATCGAGGGGCCGGGGTGGCTGGCTTACAGTATCCCATCGTTTTCTGGCATAATTTATCGTAGATCGATGGGTTGGAATGTTGAATAAATAGTACCGCATGTATTGGAGTATGTACTTAGAAATGATCATGTATATT]


>consensus_2306#0 TTTGAGTAGGCCTTTTGAGCAACACTCATAATTCTATTAGTAGCAACTTTAGTAAAAATC TTAAAACTAACATTAAGTACAACATTAAGTACAGGCCTATATTGTTGAATTTTCATTGCC TCTACGCACTTGGGCAAAAGAATAATGGTACCATAGTTCAAAGAAGATAAAGGCAAACAC CCACTATGAAAATCTTTAAAAAGTTCTAACAAGTCAACTTTAATAACATTCTTAAAAAAA CATGATAAAACTTAGCAGGAAATCCATCAGAACCCGGTGCTTTGTTGTGTTCTATTTAGA AAATGGCCTCCTTAATTACTTTTTCAATAAACTCCTAAGTTAAAGCTTCATTCTCCAAAA GAGAAATTTGGGGAATATCAGCAATATTATTCTCCTTAGCTAGTAGTAAAAGGAAATAAG ATCAGATACTGCTTGTGCTTGGAATACACGGAGTAGTACGATCGAAAACATTGTAGGAAG AAACCAGTTACATTGGAGATCAAGAAATGATTGAACACTAGCACTGTTCGAAGGCTAAAA TTTTACTGCTCCGATGATAACACATCATCATCATCTTCATCGAAAAGCTCCAGGCATCCA GGGTAGCTTCCAAGTTTCTCCAGCACCTCGGCGAGCAGCGAGGGACATGAAGCCTTGAGC TCCCTGAACCCGTCGGTCGCCACCACAGTTGCCAGCATGCCAGGCGACGCGACGTACTCC ATGCACACCGCCTTCAGCTGCGGGCCATCTCTCTGACGTCTTCCCTCCAGCAGCTGCTGG CGGCAGCTTCGCCGTCCTCGACGGGCGGCAACCTGTCCGTGTAGATGAACCGGAGCACGG CCTCGAAGACCGTCGGTTTCATGTCAAGGATGCGCACGTACCTGTCTCCGCCGCCGGTGT CCGCCATTGGGCCGAAGAACTGGGCGCGGAACACCGGCGACCGCGCCGAGAGCACCACCC TGTGCGCGTCGTAGTCGCTGCGCTCGACCTGAAAGGTCACGTCGCAGCCTTCCTTGCTCT CCAGAAGCTGCTCGAGATGACAGCAGATGGCTGGCGGCGGCACCGTGATGAAGCGGCTCA TGGTTGCTCCGGTCTTCAACTCCTTGACAACCTCCACGTCGCAGTGCATCGTCAGGCAGT CGTTGATCAGGTACTCCGACTCCACGGTTTCTATCTCCATAAATTTCTGGTACCCCCATG TTTTGCTGCTAAGTGTGAAGTCGTTAAACTGGCCCCACGAGCTCGCGGTAGCGCCATTGA CGCGGAATCTGAACCTTGCGGTAACTTTCTCTACCACAGTGCTTCCCAGCTCGAGGAACA CGGACACGTGTCTTTCTTCTTCCTTTGTGCTGCCAGCAGGGTAGAATCGGATCGCCCAGC TGTATCCACCGACCTCGAATGAGCCGGACCTGACGAAGTGTCCGGTGCCGTTCCTCTTCT GCAGGCTGTAGCCGGCGACGGTGAACTCATGCGAGCCCTTGACAAGCTCAGTGGAGTGAG TGGACATGGTGGTGGTGTGCGGTGGGCTGGTGGTGGAAGACGCAGTTGAGGCGGCGGTGG CCATCGGAAGAGAAAGGAGATGCTGAATGCTTCCCGAGCTAGAGAACTCTCTTCGTAACT AGGGATGTTCACGCATACGGCATGTATACACACACTTGGCTAAGCTCTCGGAAGATGAAC CATCTCAAGAGTAGTGGAGTAATTGTGAAGCATTCATGCGTGGAGTGGGATCGAGGGGCC GGGGTGGCTGGCTTACAGTATCCCATCGTTTTCTGGCATAATTTATCGTAGATCGATGGG TTGGAATGTTGAATAAATAGTACCGCATGTATTGGAGTATGTACTTAGAAATGATCATGT ATATT



consensusID : consensus_2306#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1374
fasta sequence
                              [GGTTATAATATTATTAAACTTGCTCTTACTACAAGCCAGATACAAGGGATTAAAAAATGATTGCACAGTACGTGCCACTTTTCATTCCAAGATCATTGTTCGAAAACTAAATTACTTGTCCAATGATAATACAGAAATAATATTGTATTATTCCTCATCGGCCTCGCTGCGTTTTCCAAAGTTCTCCAGGATCTCGATCAGAAGTGAGGGGCAGTCCAGCTTGAGCTCCCTGAACCCCTCGGTTGTCATCACGGCCGCCAACACCCCAGCCGAGGCGATGTACTCCATGCAGAGCTCCTTGAGCTGCGGGCAATGGTGCCGGTCAGCCAGCCGCAGCGTCGCCGCCGCGTTCGCCACGTCGATGGTCTCCCACAGCGCGTCCTCGCACAGCAGCCTCATCCTCTCCAGGTCAAATCTGTCGGCCGCCGCGAGCCGCTCTCCGATCATCACTCTCACCTCTTCTTCCGAGCAGCTGGCGGCCGCGACGTCGCTGAGCTTAGGACGCTTGTCGCGGTGGCTCGCGGACCAGCTCGTGGTGGCCGGCGGCAACGTGTCGGTGTAGACAAAGTGGAGCACGGCCTCGAACACCGCCGGTTTGATGTCGTGGATCCGCACGTTCCTCCGGCTGCCGGCGGCGGCGGCGTCCTCGTCCGCCATTGGGCCGAAGAACTGAGCGCTGAACACCGGAGACCGCGCCGCGAGAACCGCTCTGTGAGCGTCGTACTCGCTCTGCTCCAACTGGAGCGTCACGTCGGAGCCCTCCTTGCTCCCCACCAGCAGCTCGAGATCACGGCAGATGGCCGGCGGCGGAACCGTGATGAAGCAGCTAATGGTTGCTCCGGTCTTCACCGTCTTGACAACCTCCACGTCGCAGAGCAACGTCAGGCAGTCGTTGATCAGGTACTCCGACTCCACGGTTTCTATCTCCATAAATTTCGGGTACCCCCATGATTTGCTGGTAGGCGTGTAGTCGTCAAAACTACCGCGCATATGCAACGAGCTCGCGCTAGCGCCATGGACGTGGAAACTGAACCTCGCGGTAACTTTCTCTACCACAGTGCTTCGCAGCTCGAGGTACACGGACACGTGTCTTTCTTCTTCCTTCGTGCTGCCAGCAGGGTAGAATCGGATCGCCCAGCTGTATCCACCGACCTCGAATGAGCCGGACCTGATGGAGTGCCCGGCGCCCTTCCTCTTCTGTAGGCTGTAGCCGGCGACGGTGAACTCATGCGAGCCCCTGACAAGCTCAGTGGAGTGAGTGGAGATGGTGTTTTGCGGTGTGCTGCTGGTGGAAGACGACTGGGGCACAGTTGAGGCGGCGGCTGCGGCCATTGGAAGGGAAAGGATATGCATGCAGAGTGCTTCCCGAGCTAC]

[-] EMBL AK064130             [GGTTATAATATTATTAAACTTGCTCTTACTACAAGCCAGATACAAGGGATTAAAAAATGATTGCACAGTACGTGCCACTTTTCATTCCAAGATCATTGTTCGAAAACTAAATTACTTGTCCAATGATAATACAGAAATAATATTGTATTATTCCTCATCGGCCTCGCTGCGTTTTCCAAAGTTCTCCAGGATCTCGATCAGAAGTGAGGGGCAGTCCAGCTTGAGCTCCCTGAACCCCTCGGTTGTCATCACGGCCGCCAACACCCCAGCCGAGGCGATGTACTCCATGCAGAGCTCCTTGAGCTGCGGGCAATGGTGCCGGTCAGCCAGCCGCAGCGTCGCCGCCGCGTTCGCCACGTCGATGGTCTCCCACAGCGCGTCCTCGCACAGCAGCCTCATCCTCTCCAGGTCAAATCTGTCGGCCGCCGCGAGCCGCTCTCCGATCATCACTCTCACCTCTTCTTCCGAGCAGCTGGCGGCCGCGACGTCGCTGAGCTTAGGACGCTTGTCGCGGTGGCTCGCGGACCAGCTCGTGGTGGCCGGCGGCAACGTGTCGGTGTAGACAAAGTGGAGCACGGCCTCGAACACCGCCGGTTTGATGTCGTGGATCCGCACGTTCCTCCGGCTGCCGGCGGCGGCGGCGTCCTCGTCCGCCATTGGGCCGAAGAACTGAGCGCTGAACACCGGAGACCGCGCCGCGAGAACCGCTCTGTGAGCGTCGTACTCGCTCTGCTCCAACTGGAGCGTCACGTCGGAGCCCTCCTTGCTCCCCACCAGCAGCTCGAGATCACGGCAGATGGCCGGCGGCGGAACCGTGATGAAGCAGCTAATGGTTGCTCCGGTCTTCACCGTCTTGACAACCTCCACGTCGCAGAGCAACGTCAGGCAGTCGTTGATCAGGTACTCCGACTCCACGGTTTCTATCTCCATAAATTTCGGGTACCCCCATGATTTGCTGGTAGGCGTGTAGTCGTCAAAACTACCGCGCATATGCAACGAGCTCGCGCTAGCGCCATGGACGTGGAAACTGAACCTCGCGGTAACTTTCTCTACCACAGTGCTTCGCAGCTCGAGGTACACGGACACGTGTCTTTCTTCTTCCTTCGTGCTGCCAGCAGGGTAGAATCGGATCGCCCAGCTGTATCCACCGACCTCGAATGAGCCGGACCTGATGGAGTGCCCGGCGCCCTTCCTCTTCTGTAGGCTGTAGCCGGCGACGGTGAACTCATGCGAGCCCCTGACAAGCTCAGTGGAGTGAGTGGAGATGGTGTTTTGCGGTGTGCTGCTGGTGGAAGACGACTGGGGCACAGTTGAGGCGGCGGCTGCGGCCATTGGAAGGGAAAGGATATGCATGCAGAGTGCTTCCCGAGCTAC]


>consensus_2306#1 GGTTATAATATTATTAAACTTGCTCTTACTACAAGCCAGATACAAGGGATTAAAAAATGA TTGCACAGTACGTGCCACTTTTCATTCCAAGATCATTGTTCGAAAACTAAATTACTTGTC CAATGATAATACAGAAATAATATTGTATTATTCCTCATCGGCCTCGCTGCGTTTTCCAAA GTTCTCCAGGATCTCGATCAGAAGTGAGGGGCAGTCCAGCTTGAGCTCCCTGAACCCCTC GGTTGTCATCACGGCCGCCAACACCCCAGCCGAGGCGATGTACTCCATGCAGAGCTCCTT GAGCTGCGGGCAATGGTGCCGGTCAGCCAGCCGCAGCGTCGCCGCCGCGTTCGCCACGTC GATGGTCTCCCACAGCGCGTCCTCGCACAGCAGCCTCATCCTCTCCAGGTCAAATCTGTC GGCCGCCGCGAGCCGCTCTCCGATCATCACTCTCACCTCTTCTTCCGAGCAGCTGGCGGC CGCGACGTCGCTGAGCTTAGGACGCTTGTCGCGGTGGCTCGCGGACCAGCTCGTGGTGGC CGGCGGCAACGTGTCGGTGTAGACAAAGTGGAGCACGGCCTCGAACACCGCCGGTTTGAT GTCGTGGATCCGCACGTTCCTCCGGCTGCCGGCGGCGGCGGCGTCCTCGTCCGCCATTGG GCCGAAGAACTGAGCGCTGAACACCGGAGACCGCGCCGCGAGAACCGCTCTGTGAGCGTC GTACTCGCTCTGCTCCAACTGGAGCGTCACGTCGGAGCCCTCCTTGCTCCCCACCAGCAG CTCGAGATCACGGCAGATGGCCGGCGGCGGAACCGTGATGAAGCAGCTAATGGTTGCTCC GGTCTTCACCGTCTTGACAACCTCCACGTCGCAGAGCAACGTCAGGCAGTCGTTGATCAG GTACTCCGACTCCACGGTTTCTATCTCCATAAATTTCGGGTACCCCCATGATTTGCTGGT AGGCGTGTAGTCGTCAAAACTACCGCGCATATGCAACGAGCTCGCGCTAGCGCCATGGAC GTGGAAACTGAACCTCGCGGTAACTTTCTCTACCACAGTGCTTCGCAGCTCGAGGTACAC GGACACGTGTCTTTCTTCTTCCTTCGTGCTGCCAGCAGGGTAGAATCGGATCGCCCAGCT GTATCCACCGACCTCGAATGAGCCGGACCTGATGGAGTGCCCGGCGCCCTTCCTCTTCTG TAGGCTGTAGCCGGCGACGGTGAACTCATGCGAGCCCCTGACAAGCTCAGTGGAGTGAGT GGAGATGGTGTTTTGCGGTGTGCTGCTGGTGGAAGACGACTGGGGCACAGTTGAGGCGGC GGCTGCGGCCATTGGAAGGGAAAGGATATGCATGCAGAGTGCTTCCCGAGCTAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2306#0      TTTGAGTAGGCCTTTTGAGCAACACTCATAATTCTATTAGTAGCAACTTTAGTAAAAATC 60
consensus_2306#1      ------------------------------------------------------------
                                                                                  

consensus_2306#0      TTAAAACTAACATTAAGTACAACATTAAGTACAGGCCTATATTGTTGAATTTTCATTGCC 120
consensus_2306#1      ------------------------------------------------------------
                                                                                  

consensus_2306#0      TCTACGCACTTGGGCAAAAGAATAATGGTACCATAGTTCAAAGAAGATAAAGGCAAACAC 180
consensus_2306#1      ------------------------------------------------------------
                                                                                  

consensus_2306#0      CCACTATGAAAATCTTTAAAAAGTTCTAACAA-GTCAACTTTAATAACATTCTTAAAAAA 239
consensus_2306#1      ---------------------GGTTATAATATTATTAAACTTGCTCTTACTACAAGCCAG 39
                                            *** *** *   * **  **  *   * *   *   * 

consensus_2306#0      ACATGATAAAACTTAGCAGGAAATCCATCAGAACCCGGTGCTTTGTTGTGTTCTATTTAG 299
consensus_2306#1      ATACAAGGGA--TTAAAAAATGATTGCACAGTACGTGCCACTTT-TCAT-TCCAAGATCA 95
                      * *  *   *  ***  *    **    *** **  *   **** *  * * * *  *  

consensus_2306#0      AAAATGGCCTCCTTAATTACTTTTTCAATAA-ACTCCTAAGTTAAAGCTTCATTCTCCAA 358
consensus_2306#1      TTGTTCGAAAACTAAATTACTTGTCCAATGATAATACAGAAATAATATTGTATTATTCCT 155
                          * *    ** ******** * **** * * * *  *  ***   *  *** * *  

consensus_2306#0      AAGAGAAATTTGGGGAATATCAGCAATATTATTCTCCTTAGCTAGTAGTAAAAGGAAATA 418
consensus_2306#1      CATCGGCCTCGCTGCGTTTTCCAAAGT-------TCTCCAG--GATCTCGATCAGAAGTG 206
                       *  *   *    *   * **   * *       **   **    *    *   *** * 

consensus_2306#0      AGATCAGATACTGCTTGTGCTTGGAATACACGGAGTAGTACGATCGAAAACATTGTAGGA 478
consensus_2306#1      AGGGGCAGTCCAGCTTGAGCT-------CCCTGAACCCCTCGGTTGTCATCACGGCCGCC 259
                      **      * * ***** ***       * * **      ** * *  * **  *  *  

consensus_2306#0      AGAAACCAGTTACATTGGAGATCAAGAAATGATTGAACACTAGCACTGTTCGAAGGCTAA 538
consensus_2306#1      AACACCC-----CAGCCGAGGCGATGTACTCCATG-----CAGAGCTCCTTGA--GCTGC 307
                      *  * **     **   ***   * * * *   **      **  **  * **  ***  

consensus_2306#0      AATTTTACTGCTCCGATGATAACACATCATCATCATCTTCATCGAAAAGCTCCAGGCATC 598
consensus_2306#1      GG-------GCAATGGTGCCGGTCAGCCAGCCGCAGCGTCGCCGCCGCGTTCGCCACGTC 360
                               **   * **         ** *  ** * **  **    * **    * **

consensus_2306#0      CAGGGTAGCTTCCAAGTTTCTCCAGCACCTCGGCGAGCAGCGAGGGACATGAAGCCTTGA 658
consensus_2306#1      GATGGT--CTCCCA--------CAGCGCGTCCTCGCACAGCA---GCCTCATCCTCTCCA 407
                       * ***  ** ***        **** * **  **  ****    * *       **  *

consensus_2306#0      GCTCCCTGAACCCGTCGGTCGCCACCACAGTTGCCAGCATGCCAGGCGACGCGACGTACT 718
consensus_2306#1      GGTC---AAATCTGTCGGCCGCCGCGA--GCCGCTCTCCGATCA--TCACTCTCACCTCT 460
                      * **    ** * ***** **** * *  *  **   *    **    ** *      **

consensus_2306#0      CCATGCACACCGCCTTCAGCTGCGGGCCATCTCTCTGACGTCTTCCCTCCAGCAGCTGCT 778
consensus_2306#1      TCTTCCGAGCAGCTGGCGGCCGCG----ACGTCGCTGAGCTTAGGACGCTTGTCGCGGTG 516
                       * * *   * **   * ** ***    *  ** ****  *     * *  *  ** *  

consensus_2306#0      GGCGGCAGCTTCGCCGTCCTCGACGGGCGGCAACCTGTCCGTGTAGATGAACCGGAGCAC 838
consensus_2306#1      GCTCGCGGACCAGCTCGTGGTGGCCGGCGGCAACGTGTCGGTGTAGACAAAGTGGAGCAC 576
                      *   ** *    **       * * ********* **** *******  **  *******

consensus_2306#0      GGCCTCGAAGACCGTCGGTTTCATGTCAAGGATGCGCACGTACCTGTCTCCGCCGCCGGT 898
consensus_2306#1      GGCCTCGAACACCGCCGGTTTGATGTCGTGGATCCGCACGTTCCTCCGGCTGCCGGCGGC 636
                      ********* **** ****** *****  **** ******* ***    * **** *** 

consensus_2306#0      G------------TCCGCCATTGGGCCGAAGAACTGGGCGCGGAACACCGGCGACCGCGC 946
consensus_2306#1      GGCGGCGTCCTCGTCCGCCATTGGGCCGAAGAACTGAGCGCTGAACACCGGAGACCGCGC 696
                      *            *********************** **** ********* ********

consensus_2306#0      CGAGAGCACCACCCTGTGCGCGTCGTAGTCGCTGCGCTCGACCTGAAAGGTCACGTCGCA 1006
consensus_2306#1      CGCGAGAACCGCTCTGTGAGCGTCGTACTCGCTCTGCTCCAACTGGAGCGTCACGTCGGA 756
                      ** *** *** * ***** ******** *****  **** * *** *  ********* *

consensus_2306#0      GCCTTCCTTGCTCTCCAGAAGCTGCTCGAGATGACAGCAGATGGCTGGCGGCGGCACCGT 1066
consensus_2306#1      GCCCTCCTTGCTCCCCACCAGCAGCTCGAGATCACGGCAGATGGCCGGCGGCGGAACCGT 816
                      *** ********* ***  *** ********* ** ********* ******** *****

consensus_2306#0      GATGAAGCGGCTCATGGTTGCTCCGGTCTTCAACTCCTTGACAACCTCCACGTCGCAGTG 1126
consensus_2306#1      GATGAAGCAGCTAATGGTTGCTCCGGTCTTCACCGTCTTGACAACCTCCACGTCGCAGAG 876
                      ******** *** ******************* *  ********************** *

consensus_2306#0      CATCGTCAGGCAGTCGTTGATCAGGTACTCCGACTCCACGGTTTCTATCTCCATAAATTT 1186
consensus_2306#1      CAACGTCAGGCAGTCGTTGATCAGGTACTCCGACTCCACGGTTTCTATCTCCATAAATTT 936
                      ** *********************************************************

consensus_2306#0      CTGGTACCCCCATGTTTTGCTGCTAAGTGTGAAGTCGTTAAACTGGCCCC---------A 1237
consensus_2306#1      CGGGTACCCCCATGATTTGCTGGTAGGCGTGTAGTCGTCAAAACTACCGCGCATATGCAA 996
                      * ************ ******* ** * *** ****** ***    ** *         *

consensus_2306#0      CGAGCTCGCGGTAGCGCCATTGACGCGGAATCTGAACCTTGCGGTAACTTTCTCTACCAC 1297
consensus_2306#1      CGAGCTCGCGCTAGCGCCATGGACGTGGAAACTGAACCTCGCGGTAACTTTCTCTACCAC 1056
                      ********** ********* **** **** ******** ********************

consensus_2306#0      AGTGCTTCCCAGCTCGAGGAACACGGACACGTGTCTTTCTTCTTCCTTTGTGCTGCCAGC 1357
consensus_2306#1      AGTGCTTCGCAGCTCGAGGTACACGGACACGTGTCTTTCTTCTTCCTTCGTGCTGCCAGC 1116
                      ******** ********** **************************** ***********

consensus_2306#0      AGGGTAGAATCGGATCGCCCAGCTGTATCCACCGACCTCGAATGAGCCGGACCTGACGAA 1417
consensus_2306#1      AGGGTAGAATCGGATCGCCCAGCTGTATCCACCGACCTCGAATGAGCCGGACCTGATGGA 1176
                      ******************************************************** * *

consensus_2306#0      GTGTCCGGTGCCGTTCCTCTTCTGCAGGCTGTAGCCGGCGACGGTGAACTCATGCGAGCC 1477
consensus_2306#1      GTGCCCGGCGCCCTTCCTCTTCTGTAGGCTGTAGCCGGCGACGGTGAACTCATGCGAGCC 1236
                      *** **** *** *********** ***********************************

consensus_2306#0      CTTGACAAGCTCAGTGGAGTGAGTGGACATGGTGGTGGTGTGCGGTGGGCTGGTGGTGGA 1537
consensus_2306#1      CCTGACAAGCTCAGTGGAGTGAGTGGA---GATGGTGTTTTGCGGTGTGCTGCTGGTGGA 1293
                      * *************************   * ***** * ******* **** *******

consensus_2306#0      AGACG---------CAGTTGAGGCGGCGGT---GGCCATCGGAAGAGAAAGGAGATGCT- 1584
consensus_2306#1      AGACGACTGGGGCACAGTTGAGGCGGCGGCTGCGGCCATTGGAAGGGAAAGGATATGCAT 1353
                      *****         ***************    ****** ***** ******* ****  

consensus_2306#0      ---GAATGCTTCCCGAGCTAGAGAACTCTCTTCGTAACTAGGGATGTTCACGCATACGGC 1641
consensus_2306#1      GCAGAGTGCTTCCCGAGCTAC--------------------------------------- 1374
                         ** **************                                        

consensus_2306#0      ATGTATACACACACTTGGCTAAGCTCTCGGAAGATGAACCATCTCAAGAGTAGTGGAGTA 1701
consensus_2306#1      ------------------------------------------------------------
                                                                                  

consensus_2306#0      ATTGTGAAGCATTCATGCGTGGAGTGGGATCGAGGGGCCGGGGTGGCTGGCTTACAGTAT 1761
consensus_2306#1      ------------------------------------------------------------
                                                                                  

consensus_2306#0      CCCATCGTTTTCTGGCATAATTTATCGTAGATCGATGGGTTGGAATGTTGAATAAATAGT 1821
consensus_2306#1      ------------------------------------------------------------
                                                                                  

consensus_2306#0      ACCGCATGTATTGGAGTATGTACTTAGAAATGATCATGTATATT 1865
consensus_2306#1      --------------------------------------------
                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)