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Oryza sativa
cluster # 2313 cluster # 2313       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2313#0 length = 1449 sequences # 2  

consensusID : consensus_2313#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1449
fasta sequence
                              [GAACAACGCTAAGAGCGCCGCCGCCGCCCGTCCTAAAGAACCAGGACATGGTTAATACTTAAAGAAACCATTAGAATAGGAGAAATGTAACAACGTCCCGAGAGGAATGCGGTGACGCAGGCGTCGCCGTTATCGGCCCGAAGGCTAGGCTTTCGCCTGTAGTTTCCTACTTTCTCATGTCAATGTGTGCATGTCAAGTTCAACAGACACTACTAGCTAATCCTCTTCAACACGCAGCCACCGTGTCGACGCCTCACCACCGGCCGGCCATCGAAGAAGCATCTCGACCTCTGGCGTGCTCCAGATTCATCCACATGGGTGGGCTGGAGAGGAAGAGGGTCAGAGAGAAGATGAATCCCCTCTCCCCGCACTAGTCCATCCAGTGTGGCCATCTTGCGATGGCAAATCGCCGCCGCAAGAGGACCAACACCTAGAGAGGAGCTTGTCGCAGTCCTCAACGCCCCTCTTATGATGCTACCGTTGTTGCCGCCATCTCGACCAGGCTGCCCGTGTCTCCTACGGGCCGCCTGGTCGCATCACCTTCGCCTCCGTCCTCCCACTGTGACAGTCTCGTCACCGCACCACCTCACCTTGCCGTGCTCCACCATAGCAGGCTCGCCACCACGCCGGCCATGTTCCACTAATCGTGCTCCTTCATGCCAGGGCCATCATCATGGTCTTCCCTCTGGAGCCCCACAACAGGTGTCGCACTCTCCACGCGCTTCGCCGGCCACACGTCGTCGTGTCGGCCGGCGCCGTGCGCTTCCTCCTGTCACAGCGCCACTGTCGAACTGGATCTGGGAGCTCTAGATCCGGCACCACCGCCACTGCCGCCACCACCTTCTCTCCAGCTGCCAACCTCCACCGCCGTCTGCGCCCCTGCATTGGGAATGCCAAATCCACTTCCGAGAGCGTCGGATCCATTGCGCCCTTGCCGATCGACTCTAGCCGCTGTGGACCTGCAACGCCATGCGCCGCTCCGTCCTCTCGTGCCAAGGGCGAGCTTCGCTGGGTCACGACTCACGATGTCCTCACCACCGCCTTCCCAGTTGGCCGCTCGCCTTTGCAGCAGCGAGCTCCGGCGACGGCGAGGCGTTGAGGGTGGATGGAAGGTGGCGACGCAGGCGGCTAGGGTTTCGCCCCCGAGAAATCTGTGCAAGAGCGACGCGGGGAGCGGTTAGTCTTAGTTTTATTATTAGCCTGAAACTCTGAATGAGCTCTAAGTGGTCCAATGAACACTGATCATACGTCAGAATTCATTTTTACTGCATGGTAGATATGCATGCAAATAAGTGCTTTGATCATTATTCAGAGTAGTGAGTGCACTGGGTTAAGGCCCAGTTGTCTCTGTTCATTCAATCATCATTCATCAGCCTGTGTTTTTCGACAGGCCTGAGTTTTAGTACTTATAGCCTCCTGTAAACTCGTTTCTGTATTATAAATACCTAT]

[-] EMBL AK108487             [GAACAACGCTAAGAGCGCCGCCGCCGCCCGTCCTAAAGAACCAGGACATGGTTAATACTTAAAGAAACCATTAGAATAGGAGAAATGTAACAACGTCCCGAGAGGAATGCGGTGACGCAGGCGTCGCCGTTATCGGCCCGAAGGCTAGGCTTTCGCCTGTAGTTTCCTACTTTCTCATGTCAATGTGTGCATGTCAAGTTCAACAGACACTACTAGCTAATCCTCTTCAACACGCAGCCACCGTGTCGACGCCTCACCACCGGCCGGCCATCGAAGAAGCATCTCGACCTCTGGCGTGCTCCAGATTCATCCACATGGGTGGGCTGGAGAGGAAGAGGGTCAGAGAGAAGATGAATCCCCTCTCCCCGCACTAGTCCATCCAGTGTGGCCATCTTGCGATGGCAAATCGCCGCCGCAAGAGGACCAACACCTAGAGAGGAGCTTGTCGCAGTCCTCAACGCCCCTCTTATGATGCTACCGTTGTTGCCGCCATCTCGACCAGGCTGCCCGTGTCTCCTACGGGCCGCCTGGTCGCATCACCTTCGCCTCCGTCCTCCCACTGTGACAGTCTCGTCACCGCACCACCTCACCTTGCCGTGCTCCACCATAGCAGGCTCGCCACCACGCCGGCCATGTTCCACTAATCGTGCTCCTTCATGCCAGGGCCATCATCATGGTCTTCCCTCTGGAGCCCCACAACAGGTGTCGCACTCTCCACGCGCTTCGCCGGCCACACGTCGTCGTGTCGGCCGGCGCCGTGCGCTTCCTCCTGTCACAGCGCCACTGTCGAACTGGATCTGGGAGCTCTAGATCCGGCACCACCGCCACTGCCGCCACCACCTTCTCTCCAGCTGCCAACCTCCACCGCCGTCTGCGCCCCTGCATTGGGAATGCCAAATCCACTTCCGAGAGCGTCGGATCCATTGCGCCCTTGCCGATCGACTCTAGCCGCTGTGGACCTGCAACGCCATGCGCCGCTCCGTCCTCTCGTGCCAAGGGCGAGCTTCGCTGGGTCACGACTCACGATGTCCTCACCACCGCCTTCCCAGTTGGCCGCTCGCCTTTGCAGCAGCGAGCTCCGGCGACGGCGAGGCGTTGAGGGTGGATGGAAGGTGGCGACGCAGGCGGCTAGGGTTTCGCCCCCGAGA                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK064265             [                                                                                                                                                                       TACTTTCTCATGTCAATGTGTGCATGTCAAGTTCAACAGACACTACTAGCTAATCCTCTTCAACACGCAGCCACCGTGTCGACGCCTCACCACCGGCCGGCCATCGAAGAAGCATCTCGACCTCTGGCGTGCTCCAGATTCATCCACATGGGTGGGCTGGAGAGGAAGAGGGTCAGAGAGAAGATGAATCCCCTCTCCCCGCACTAGTCCATCCAGTGTGGCCATCTTGCGATGGCAAATCGCCGCCGCAAGAGGACCAACACCTAGAGAGGAGCTTGTCGCAGTCCTCAACGCCCCTCTTATGATGCTACCGTTGTTGCCGCCATCTCGACCAGGCTGCCCGTGTCTCCTACGGGCCGCCTGGTCGCATCACCTTCGCCTCCGTCCTCCCACTGTGACAGTCTCGTCACCGCACCACCTCACCTTGCCGTGCTCCACCATAGCAGGCTCGCCACCACGCCGGCCATGTTCCACTAATCGTGCTCCTTCATGCCAAGGCCATCATCATGGTCTTCCCTCTGGAGCCCCACAACAGGTGTCGCACTCTCCACGCGCTTCGCCGGCCACACGTCGTCGTGTCGGCCGGCGCCGTGCGCTTCCTCCTGTCACAGCGCCACTGTCGAACTGGATCTGGGAGCTCTAGATCCGGCACCACCGCCACTGCCGCCACCACCTTCTCTCCAGCTGCCAACCTCCACCGCCGTCTGCGCCCCTGCATTGGGAATGCCAAATCCACTTCCGAGAGCGTCGGATCCATTGCGCCCTTGCCGATCGACTCTAGCCGCTGTGGACCTGCAACGCCATGCGCCGCTCCGTCCTCTCGTGCCAAGGGCGAGCTTCGCTGGGTCACGACTCACGATGTCCTCACCACCGCCTTCCCAGTTGGCCGCTCGCCTTTGCAGCAGCGAGCTCCGGCGACGGCGAGGCGTTGAGGGTGGATGGAAGGTGGCGACGCAGGCGGCTAGGGTTTCGCCCCCGAGAAATCTGTGCAAGAGCGACGCGGGGAGCGGTTAGTCTTAGTTTTATTATTAGCCTGAAACTCTGAATGAGCTCTAAGTGGTCCAATGAACACTGATCATACGTCAGAATTCATTTTTACTGCATGGTAGATATGCATGCAAATAAGTGCTTTGATCATTATTCAGAGTAGTGAGTGCACTGGGTTAAGGCCCAGTTGTCTCTGTTCATTCAATCATCATTCATCAGCCTGTGTTTTTCGACAGGCCTGAGTTTTAGTACTTATAGCCTCCTGTAAACTCGTTTCTGTATTATAAATACCTAT]


>consensus_2313#0 GAACAACGCTAAGAGCGCCGCCGCCGCCCGTCCTAAAGAACCAGGACATGGTTAATACTT AAAGAAACCATTAGAATAGGAGAAATGTAACAACGTCCCGAGAGGAATGCGGTGACGCAG GCGTCGCCGTTATCGGCCCGAAGGCTAGGCTTTCGCCTGTAGTTTCCTACTTTCTCATGT CAATGTGTGCATGTCAAGTTCAACAGACACTACTAGCTAATCCTCTTCAACACGCAGCCA CCGTGTCGACGCCTCACCACCGGCCGGCCATCGAAGAAGCATCTCGACCTCTGGCGTGCT CCAGATTCATCCACATGGGTGGGCTGGAGAGGAAGAGGGTCAGAGAGAAGATGAATCCCC TCTCCCCGCACTAGTCCATCCAGTGTGGCCATCTTGCGATGGCAAATCGCCGCCGCAAGA GGACCAACACCTAGAGAGGAGCTTGTCGCAGTCCTCAACGCCCCTCTTATGATGCTACCG TTGTTGCCGCCATCTCGACCAGGCTGCCCGTGTCTCCTACGGGCCGCCTGGTCGCATCAC CTTCGCCTCCGTCCTCCCACTGTGACAGTCTCGTCACCGCACCACCTCACCTTGCCGTGC TCCACCATAGCAGGCTCGCCACCACGCCGGCCATGTTCCACTAATCGTGCTCCTTCATGC CAGGGCCATCATCATGGTCTTCCCTCTGGAGCCCCACAACAGGTGTCGCACTCTCCACGC GCTTCGCCGGCCACACGTCGTCGTGTCGGCCGGCGCCGTGCGCTTCCTCCTGTCACAGCG CCACTGTCGAACTGGATCTGGGAGCTCTAGATCCGGCACCACCGCCACTGCCGCCACCAC CTTCTCTCCAGCTGCCAACCTCCACCGCCGTCTGCGCCCCTGCATTGGGAATGCCAAATC CACTTCCGAGAGCGTCGGATCCATTGCGCCCTTGCCGATCGACTCTAGCCGCTGTGGACC TGCAACGCCATGCGCCGCTCCGTCCTCTCGTGCCAAGGGCGAGCTTCGCTGGGTCACGAC TCACGATGTCCTCACCACCGCCTTCCCAGTTGGCCGCTCGCCTTTGCAGCAGCGAGCTCC GGCGACGGCGAGGCGTTGAGGGTGGATGGAAGGTGGCGACGCAGGCGGCTAGGGTTTCGC CCCCGAGAAATCTGTGCAAGAGCGACGCGGGGAGCGGTTAGTCTTAGTTTTATTATTAGC CTGAAACTCTGAATGAGCTCTAAGTGGTCCAATGAACACTGATCATACGTCAGAATTCAT TTTTACTGCATGGTAGATATGCATGCAAATAAGTGCTTTGATCATTATTCAGAGTAGTGA GTGCACTGGGTTAAGGCCCAGTTGTCTCTGTTCATTCAATCATCATTCATCAGCCTGTGT TTTTCGACAGGCCTGAGTTTTAGTACTTATAGCCTCCTGTAAACTCGTTTCTGTATTATA AATACCTAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)