|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2317#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2728 fasta sequence
[TCAAACCATTCCTCCTTCAGTTTTCCTTCTCCACCACTCTTCCCCCGTGTTCATCTTCTGCTTCCCCATGCTTCTCCCTTGTCATGTCCTTCTTGGCCTCCTGCTCCTCTCCCTGCACACTCCGGCGAGCTCCGCCGCCGCCACGGATACCGTGTCACCCGGCCATTCACTTGCCGGCAGTGACAGGCTTGTCTCCAATAACAGTAAGTTCGCCCTCGGCTTCTTCAAGCCAGGTAATGAGTCCTCCTACACCAACCACAACTCCTACCTTGGCATATGGTTCAACAAGGTCTCCAAGCTAACCCCGTTGTGGACCGCCAATGGCGAGAATCCAGTGGTGGACCCCACTTCACCGGAGCTCGCAATCTCCGGTGATGGAAACCTGGCCATCCTGGATCATGCCACCAAATCCATCATATGGTCTACCCGTGCCAACATCACAACCAATGACACCATTGCCGTGCTTCTGAACAATGGCAACCTTGTCCTACGAAGCTCCTCAAACTCATCCAACATTTTCTGGCAGAGCTTCGACTACCCAACAGATACACTTTTCGCTGGTGCAAAGATTGGCTGGGACAAGGTCACCGGCATGAACCGCCGTCTTGTTTCCAGGAAAAGTTCGGTTGATCAGGCTCCTGGTATATTTTCCTTGGAGTTAGGGCTCAATGGGGAGGGTCATCTGCTATGGAACTCAACTGTGGCGTATTGGTCCAGTGGGGACTGGAACGGTCGATACTTCGGCCTAGCGCCAGAGATGATAGGCGATGTCATGCCAAATTTCACATTTGTCCACAATGACAAAGAGGCCTACTTCACATACACCTTGTATGATGACACGGCTATCGTGCACGCTGGACTAGATGTCTTTGGGATAGGTTTTGTGGGTATGTGGTTGGAAGGAAACCAAGAATGGTTCAAGAATTACAGGCAGCCTGTAGTTCACTGTGATGTGTATGCAGTTTGTGGACCTTTCACAATCTGTGACGACAATAAGGATCTGTTCTGTGACTGTATGAAGGGCTTCTCCGTAAGATCACCGAAGGATTGGGAGCTTGACGATCAAACAGGAGGTTGCATCAGGAATACTCCATTAAGTTGTGGAAGTAGCAAGGACAGGACAAGCCTCACAGATAAGTTCTACCCTATGCAAAGTATTAGGTTACCCCACAATGCAGAAAATGTGCAGGCTGCAACCAGTGGAGATGAATGCTCACAGGTTTGCTTGAGCAACTGCTCCTGTACTGCATATTCCTATGGGAAAGATGGCTGCTCCATTTGGCATGATGAGTTGTATAACGTGAAGCAACTATCTGATGCTTCTTCAGACAGAAATGGGGGAGTTCTTTACATTCGCCTTGCTGCAAAAGAGTTGCCAGGTTCAGAAAAGAAGAAGAATAGAAATATAAGTGGTTTTGCCATTGGTGCAAGCACTGCCACTTTGTTTTTGATGATCCTTCTACTGATACTTTGGAGGAGAAAAGGGAAATGGTTTACTCGCACATTGCAAAAGCCTGAGGGTGGCATTGGGGTCGTTGCATTTCGATATATTAATTTGCAACGGGCAACTAAAGCCTTTTTCAGAGAAGTTGGGGGGAGGAAGTTTTGGTTCTGTATTTAAGGGGTACCTAGGCAACTCTACCATAGCCGTGAAAAGGCTCGATGGAGCCTATCAAGGAGAGAAGCAATTCAGGGCTGAAGTGAATTCAATTGGAATCATCCAGCATATTAACTTAGTTAAACTGATTGGGTTTTGTTGTGAAGGTGATAACAGGTTACTTGTGTATGAATACATGCCAAACCGCTCCCTTGATGTGTGCTTGTTCGAGGCTAATGATATAGTTTTGGATTGGACTACTAGGTACCAAGTAGCTACTGGAGTTGCAAGAGGTCTTGCTTACTTGCATAATAGTTGTCGGGATTGCATCATACATTGTGATATCAAGCCAGAGAATATACTTCTCGATGCATCTTATGTGCCTAAAATTGCAGATTTTGGAATGGCAAAGATTTTGGGGAGGGAATTTAGCCGTGCAATGACAACAATGAGAGGAACTATTGGATATATGGCTCCTGAATGGATTAGTGGAACAGTTGTTACATCAAAAGTAGATGTTTACAGCTATGGAATGGTTTTGTTTGAGATCATATCAGGAAGGAGGAACTCAAGTCATGAATGTTTCAGGGATGGTGATTATTCATTCTTTTTTCCCATGCAAGTTGCACGCAAACTTCTCAATGGAGACATCGGAAGTCTTGTGGATGCCAGTTTGAAAGGTGACATGAACCTAGTGGAGGTTGAAAGAGCTTGCAATTGCATGTTGGTGCATTCAAGACAACGAATTTGATCGACCAACAATGGCTGAGGTGGTACAGGCCCTTGAGGGTCTACTTGAACTCGACATGCCTCCATTGCCAAGACTACTAAGTGCTATCACAGGAGACTCACATTCAGTGACACCACAATATTTTGATTCAGTGTAAATCTATATGCTGATTCACAATTAAAAGTAGTCTACCAGGACATTATAATTCATCTTGCCTTTTTAGAAAATTAGGGATAACATCTAAGGTCTTTAAGAGATCATGTTAAATAAACTCGTAGTTATTAAGATCTCTGTGCCCAAGCAGGAGATCGTGCCAGCCTTCCAGACAAAATATATTTTGTGTCTATGTAAGATCTGTAGGTATTAGTGTACCGTATACATTTTTCATGTTGCCAATTGAG]
[+] EMBL AK064414 [TCAAACCATTCCTCCTTCAGTTTTCCTTCTCCACCACTCTTCCCCCGTGTTCATCTTCTGCTTCCCCATGCTTCTCCCTTGTCATGTCCTTCTTGGCCTCCTGCTCCTCTCCCTGCACACTCCGGCGAGCTCCGCCGCCGCCACGGATACCGTGTCACCCGGCCATTCACTTGCCGGCAGTGACAGGCTTGTCTCCAATAACAGTAAGTTCGCCCTCGGCTTCTTCAAGCCAGGTAATGAGTCCTCCTACACCAACCACAACTCCTACCTTGGCATATGGTTCAACAAGGTCTCCAAGCTAACCCCGTTGTGGACCGCCAATGGCGAGAATCCAGTGGTGGACCCCACTTCACCGGAGCTCGCAATCTCCGGTGATGGAAACCTGGCCATCCTGGATCATGCCACCAAATCCATCATATGGTCTACCCGTGCCAACATCACAACCAATGACACCATTGCCGTGCTTCTGAACAATGGCAACCTTGTCCTACGAAGCTCCTCAAACTCATCCAACATTTTCTGGCAGAGCTTCGACTACCCAACAGATACACTTTTCGCTGGTGCAAAGATTGGCTGGGACAAGGTCACCGGCATGAACCGCCGTCTTGTTTCCAGGAAAAGTTCGGTTGATCAGGCTCCTGGTATATTTTCCTTGGAGTTAGGGCTCAATGGGGAGGGTCATCTGCTATGGAACTCAACTGTGGCGTATTGGTCCAGTGGGGACTGGAACGGTCGATACTTCGGCCTAGCGCCAGAGATGATAGGCGATGTCATGCCAAATTTCACATTTGTCCACAATGACAAAGAGGCCTACTTCACATACACCTTGTATGATGACACGGCTATCGTGCACGCTGGACTAGATGTCTTTGGGATAGGTTTTGTGGGTATGTGGTTGGAAGGAAACCAAGAATGGTTCAAGAATTACAGGCAGCCTGTAGTTCACTGTGATGTGTATGCAGTTTGTGGACCTTTCACAATCTGTGACGACAATAAGGATCTGTTCTGTGACTGTATGAAGGGCTTCTCCGTAAGATCACCGAAGGATTGGGAGCTTGACGATCAAACAGGAGGTTGCATCAGGAATACTCCATTAAGTTGTGGAAGTAGCAAGGACAGGACAAGCCTCACAGATAAGTTCTACCCTATGCAAAGTATTAGGTTACCCCACAATGCAGAAAATGTGCAGGCTGCAACCAGTGGAGATGAATGCTCACAGGTTTGCTTGAGCAACTGCTCCTGTACTGCATATTCCTATGGGAAAGATGGCTGCTCCATTTGGCATGATGAGTTGTATAACGTGAAGCAACTATCTGATGCTTCTTCAGACAGAAATGGGGGAGTTCTTTACATTCGCCTTGCTGCAAAAGAGTTG ]
[+] EMBL AK101902 [ TTCTCCACCACTCTTCCCCCGTGTTCATCTTCTGCTTCCCCATGCTTCTCCCTTGTCATGTCCTTCTTGGCCTCCTGCTCCTCTCCCTGCACACTCCGGCGAGCTCCGCCGCCGCCACGGATACCGTGTCACCCGGCCATTCACTTGCCGGCAGTGACAGGCTTGTCTCCAATAACAGTAAGTTCGCCCTCGGCTTCTTCAAGCCAGGTAATGAGTCCTCCTACACCAACCACAACTCCTACCTTGGCATATGGTTCAACAAGGTCTCCAAGCTAACCCCGTTGTGGACCGCCAATGGCGAGAATCCAGTGGTGGACCCCACTTCACCGGAGCTCGCAATCTCCGGTGATGGAAACCTGGCCATCCTGGATCATGCCACCAAATCCATCATATGGTCTACCCGTGCCAACATCACAACCAATGACACCATTGCCGTGCTTCTGAACAATGGCAACCTTGTCCTACGAAGCTCCTCAAACTCATCCAACATTTTCTGGCAGAGCTTCGACTACCCAACAGATACACTTTTCGCTGGTGCAAAGATTGGCTGGGACAAGGTCACCGGCATGAACCGCCGTCTTGTTTCCAGGAAAAGTTCGGTTGATCAGGCTCCTGGTATATTTTCCTTGGAGTTAGGGCTCAATGGGGAGGGTCATCTGCTATGGAACTCAACTGTGGCGTATTGGTCCAGTGGGGACTGGAACGGTCGATACTTCGGCCTAGCGCCAGAGATGATAGGCGATGTCATGCCAAATTTCACATTTGTCCACAATGACAAAGAGGCCTACTTCACATACACCTTGTATGATGACACGGCTATCGTGCACGCTGGACTAGATGTCTTTGGGATAGGTTTTGTGGGTATGTGGTTGGAAGGAAACCAAGAATGGTTCAAGAATTACAGGCAGCCTGTAGTTCACTGTGATGTGTATGCAGTTTGTGGACCTTTCACAATCTGTGACGACAATAAGGATCTGTTCTGTGACTGTATGAAGGGCTTCTCCGTAAGATCACCGAAGGATTGGGAGCTTGACGATCAAACAGGAGGTTGCATCAGGAATACTCCATTAAGTTGTGGAAGTAGCAAGGACAGGACAAGCCTCACAGATAAGTTCTACCCTATGCAAAGTATTAGGTTACCCCACAATGCAGAAAATGTGCAGGCTGCAACCAGTGGAGATGAATGCTCACAGGTTTGCTTGAGCAACTGCTCCTGTACTGCATATTCCTATGGGAAAGATGGCTGCTCCATTTGGCATGATGAGTTGTATAACGTGAAGCAACTATCTGATGCTTCTTCAGACAGAAATGGGGGAGTTCTTTACATTCGCCTTGCTGCAAAAGAGTTGCCAGGTTCAGAAAAGAAGAAGAATAGAAATATAAGTGGTTTTGCCATTGGTGCAAGCACTGCCACTTTGTTTTTGATGATCCTTCTACTGATACTTTGGAGGAGAAAAGGGAAATGGTTTACTCGCACATTGCAAAAGCCTGAGGGTGGCATTGGGGTCGTTGCATTTCGATATATTAATTTGCAACGGGCAACTAAAGCCTTTTTCAGAGAAGTTGGGGGGAGGAAGTTTTGGTTCTGTATTTAAGGGGTACCTAGGCAACTCTACCATAGCCGTGAAAAGGCTCGATGGAGCCTATCAAGGAGAGAAGCAATTCAGGGCTGAAGTGAATTCAATTGGAATCATCCAGCATATTAACTTAGTTAAACTGATTGGGTTTTGTTGTGAAGGTGATAACAGGTTACTTGTGTATGAATACATGCCAAACCGCTCCCTTGATGTGTGCTTGTTCGAGGCTAATGATATAGTTTTGGATTGGACTACTAGGTACCAAGTAGCTACTGGAGTTGCAAGAGGTCTTGCTTACTTGCATAATAGTTGTCGGGATTGCATCATACATTGTGATATCAAGCCAGAGAATATACTTCTCGATGCATCTTATGTGCCTAAAATTGCAGATTTTGGAATGGCAAAGATTTTGGGGAGGGAATTTAGCCGTGCAATGACAACAATGAGAGGAACTATTGGATATATGGCTCCTGAATGGATTAGTGGAACAGTTGTTACATCAAAAGTAGATGTTTACAGCTATGGAATGGTTTTGTTTGAGATCATATCAGGAAGGAGGAACTCAAGTCATGAATGTTTCAGGGATGGTGATTATTCATTCTTTTTTCCCATGCAAGTTGCACGCAAACTTCTCAATGGAGACATCGGAAGTCTTGTGGATGCCAGTTTGAAAGGTGACATGAACCTAGTGGAGGTTGAAAGAGCTTGCAATTGCATGTTGGTGCATTCAAGACAACGAATTTGATCGACCAACAATGGCTGAGGTGGTACAGGCCCTTGAGGGTCTACTTGAACTCGACATGCCTCCATTGCCAAGACTACTAAGTGCTATCACAGGAGACTCACATTCAGTGACACCACAATATTTTGATTCAGTGTAAATCTATATGCTGATTCACAATTAAAAGTAGTCTACCAGGACATTATAATTCATCTTGCCTTTTTAGAAAATTAGGGATAACATCTAAGGTCTTTAAGAGATCATGTTAAATAAACTCGTAGTTATTAAGATCTCTGTGCCCAAGCAGGAGATCGTGCCAGCCTTCCAGACAAAATATATTTTGTGTCTATGTAAGATCTGTAGGTATTAGTGTACCGTATACATTTTTCATGTTGCCAATTGAG]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||