cluster # 2330

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Oryza sativa
cluster # 2330 cluster # 2330 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2330#0 length = 828 sequences # 2

consensusID : consensus_2330#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 828
fasta sequence

                              [CAATCATTCATGGGGATAATTTACCTCATGAAACAATCCATACATACATACATACATACATGGCATACGTACAGAGGAGCTGAGCTACCAGCCTACCAACAATTACTTATTATTACTATTATTCTCCCCAAGCACTAATCCAATCCAGAGATGAACACAAGAGCAACAAGAAGAAGAAGAAGAAGAAGAATTCTGGACAAAAGGCCTAAAGAGCTAGAGCAGCAAGCAGACAGAAACAGAGGAACAAGTGAGACGACTTACATGGCCTTCTTTTGGGTCAGGTAAATTTCTTTTGTTCATTTCTTGGCACAGCATTTGCAGCTGTACATGTGATTGACGCCAACTATGACTCGTGCAGCAGACAAGCAAGCAAGCAAGCACGCCTTCTTTTCTTTGTCTTGTTTCTTGGAGCAGCATAGCACACCGATGCAACGAAATGAGGAAGGAAATCACAAATGAATTTAGAGATGTCCACACTGACTGACTAGAAATCACACGCACGAGAGAGCAGTTCCCCTGATTACTGCAAAGCAAGCAAGGCAAGGCAAGAAAAGGAAGAAGAGTTTGTTTTTCATCTTGTTGATGGTGGTGGTGGAGTCACGGTGCACAGCAGGGGATGGATGGATGGATGGATGGATGGATGAAAGAAGCAAAGACCTAACCTAATCAGCGGCTAAAGCTCCTATGTCAACCCAACTGGGAAGAAGCAAAGAGCACAGAGCACAGGGCTGAAATTTGCACTAAAACCAACCATGTCTGATGGCTCAATTTTGCTGAGCACTGTAATTGTTGCTCCTGCTCCATCATCAATTCGGTCGAACCCTAGAA]

[+] EMBL CB656370             [CAATCATTCATGGGGATAATTTACCTCATGAAACAATCCATACATACATACATACATACATGGCATACGTACAGAGGAGCTGAGCTACCAGCCTACCAACAATTACTTATTATTACTATTATTCTCCCCAAGCACTAATCCAATCCAGAGATGAACACAAGAGCAACAAGAAGAAGAAGAAGAAGAAGAATTCTGGACAAAAGGCCTAAAGAGCTAGAGCAGCAAGCAGACAGAAACAGAGGAACAAGTGAGACGACTTACATGGCCTTCTTTTGGGTCAGGTAAATTTCTTTTGTTCATTTCTTGGCACAGCATTTGCAGCTGTACATGTGATTGACGCCAACTATGACTCGTGCAGCAGACAAGCAAGCAAGCAAGCACGCCTTCTTTTCTTTGTCTTGTTTCTTGGAGCAGCATAGCACACCGATGCAACGAAATGAGGAAGGAAATCACAAATGAATTTAGAGATGTCCACACTGACTGACTAGAAATCACACGCACGAGAGAGCAGTTCCCCTGATTACTGCAAAGCAAGCAAGGCAAGGCAAGAAAAGGAAGAAGAGTTTGTTTTTCATCTTGTTGATGGTGGTGGTGGAGTCACGGTGCACAGCAGGGGATGGATGGATGGATGGATGGATGGATGAAAGAAGCAAAGACCTAACCTAATCAGCGGCTAAAGCTCCTATGTCAACCCAACTGGGAAGAAGCAAAGAGCACAGAGCACAGGGCTGAAATTTGCACTAAAACCAACCATGTCTGATGGCTC                                                              ]
[+] EMBL AK062988             [                                                                                                          TTATTATTACTATTATTCTCCCCAAGCACTAATCCAATCCAGAGATGAACACAAGAGCAACAAGAAGAAGAAGAAGAAGAAGAATTCTGGACAAAAGGCCTAAAGAGCTAGAGCAGCAAGCAGACAGAAACAGAGGAACAAGTGAGACGACTTACATGGCCTTCTTTTGGGTCAGGTAAATTTCTTTTGTTCATTTCTTGGCACAGCATTTGCAGCTGTACATGTGATTGACGCCAACTATGACTCGTGCAGCAGACAAGCAAGCAAGCAAGCACGCCTTCTTTTCTTTGTCTTGTTTCTTGGAGCAGCATAGCACACCGATGCAACGAAATGAGGAAGGAAATCACAAATGAATTTAGAGATGTCCACACTGACTGACTAGAAATCACACGCACGAGAGAGCAGTTCCCCTGATTACTGCAAAGCAAGCAAGGCAAGGCAAGAAAAGGAAGAAGAGTTTGTTTTTCATCTTGTTGATGGTGGTGGTGGAGTCACGGTGCACAGCAGGGGATGGATGGATGGATGGATGGATGGATGAGAGAAGCAGAGACCTAACCTAATCAGCGGCTAAAGCTCCTATGTCAACCCAACTGGGAAGAAGCAAAGAGCACAGAGCACAGGGCTGAAATTTGCACTAAAACCAACCATGTCTGATGGCTCAATTTTGCTGAGCACTGTAATTGTTGCTCCTGCTCCATCATCAATTCGGTCGAACCCTAGAA]




>consensus_2330#0
CAATCATTCATGGGGATAATTTACCTCATGAAACAATCCATACATACATACATACATACA
TGGCATACGTACAGAGGAGCTGAGCTACCAGCCTACCAACAATTACTTATTATTACTATT
ATTCTCCCCAAGCACTAATCCAATCCAGAGATGAACACAAGAGCAACAAGAAGAAGAAGA
AGAAGAAGAATTCTGGACAAAAGGCCTAAAGAGCTAGAGCAGCAAGCAGACAGAAACAGA
GGAACAAGTGAGACGACTTACATGGCCTTCTTTTGGGTCAGGTAAATTTCTTTTGTTCAT
TTCTTGGCACAGCATTTGCAGCTGTACATGTGATTGACGCCAACTATGACTCGTGCAGCA
GACAAGCAAGCAAGCAAGCACGCCTTCTTTTCTTTGTCTTGTTTCTTGGAGCAGCATAGC
ACACCGATGCAACGAAATGAGGAAGGAAATCACAAATGAATTTAGAGATGTCCACACTGA
CTGACTAGAAATCACACGCACGAGAGAGCAGTTCCCCTGATTACTGCAAAGCAAGCAAGG
CAAGGCAAGAAAAGGAAGAAGAGTTTGTTTTTCATCTTGTTGATGGTGGTGGTGGAGTCA
CGGTGCACAGCAGGGGATGGATGGATGGATGGATGGATGGATGAAAGAAGCAAAGACCTA
ACCTAATCAGCGGCTAAAGCTCCTATGTCAACCCAACTGGGAAGAAGCAAAGAGCACAGA
GCACAGGGCTGAAATTTGCACTAAAACCAACCATGTCTGATGGCTCAATTTTGCTGAGCA
CTGTAATTGTTGCTCCTGCTCCATCATCAATTCGGTCGAACCCTAGAA

clustalw multiple alignements is not computed in this case