cluster # 2338

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2338 cluster # 2338 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2338#0 length = 1186 sequences # 2

consensusID : consensus_2338#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1186
fasta sequence

                              [TCTTTTTTTTTCGCAGACGGATCACTAAAGCGAATTTTCGCAGGCGCTGCTTAAGTGGTCCATCAGGCTTCATCAAAATTCACCCCGATTTATATTTTTGTATGTGATCATTTGGCTCTAAAGGTCATATCCGACTACGAAAATAAACCCCCACATCGAGAAAAATACTTTTTCTAATGTCTATCTCCTGGACCGGCTGTCGTAGCCGGCGTGGTGCCCCCGGCGGCCACCGCCTCGTCGTCGTCGTCGGGGACGGTGTCTAAGCGGTGGTGGTGGTGGTGGCCGCCGTGGTGCTGGTGGAGGATGGAGTGGATCTCGATGGGGGTGGTGGAGAAGGACTTGATGATGCGGTCGAGCCCCCCGTGAAGCGGCGCCGCCGGCTTGGGCAGGCTCAGGCTCAGCCCCTTGCGCAGCTGCTGGTCCCTCCGCTGCTGCGCCATCTCCACCTGATGCCCCATCAGCCGCGCCACCCCCTGCGCCTCCTCGTCGTCCTCGTCGTCGTCGCCGCCTTTCCCCGCCGGCTTCTTCGTCCTCCGGTACGCCATGTACAGCGCCAGCTGCGCCGTCCCCAGCGCGAACCCGATTGCATTCGGAATTCCGATGAAGTAGTCCTTGACGAGCAAGGAGTAGACGCTCCAGACGCCGCCGTTGAGGAAGAGGAAGAAGGAGAGGGAGAAGGGCATGTACTCCACGCTCCTCGTCTTCACCACCGTCCTCATCGCGGCCATCGGCGCANCGTACATGCCGATGGTGAGCGCCGCGCACAGCACGCCGACCACGAACAGCCGCACGCCGCCGTGCAGCGCCACCAGCGCCACCGCCACCACCGCCGCCAGCGCGCCCACGTTCACGGCCAGCACCACCTTCACCATCTTCGCCTTGGTCTCCCTGGGGGCGTAGGCGAGGTAGAGCGTGACGTAGATGGCCTCGAGGGCGGCGCCGGAGCCGTTGACGGTGACGATGAGGAGACCGCCGGGCTTGTGGAGGCCGTAGAACGTCCACAGCGAGGTGCTCAGCAGCGTGGTCACGTACGGCAGCCACCTGAATTCCTCCGTGCTCTTGCTCCTCACGATCCTCCGGAAAGTCGCAATTGGAGACGCGAAGACCAGTATTGAGATTACGTTCCCTACGATTCCGACGAAGAAGCTTGGATCCGCCATTGCTGGAGCTAATTCTAGAAACAGAG]

[+] EMBL CB657361             [TCTTTTTTTTTCGCAGACGGATCACTAAAGCGAATTTTCGCAGGCGCTGCTTAAGTGGTCCATCAGGCTTCATCAAAATTCACCCCGATTTATATTTTTGTATGTGATCATTTGGCTCTAAAGGTCATATCCGACTACGAAAATAAACCCCCACATCGAGAAAAATACTTTTTCTAATGTCTATCTCCTGGACCGGCTGTCGTAGCCGGCGTGGTGCCCCCGGCGGCCACCGCCTCGTCGTCGTCGTCGGGGACGGTGTCTAAGCGGTGGTGGTGGTGGTGGCCGCCGTGGTGCTGGTGGAGGATGGAGTGGATCTCGATGGGGGTGGTGGAGAAGGACTTGATGATGCGGTCGAGCCCCCCGTGAAGCGGCGCCGCCGGCTTGGGCAGGCTCAGGCTCAGCCCCTTGCGCAGCTGCTGGTCCCTCCGCTGCTGCGCCATCTCCACCTGATGCCCCATCAGCCGCGCCACCCCCTGCGCCTCCTCGTCGTCCTCGTCGTCGTCGCCGCCTTTCCCCGCCGGCTTCTTCGTCCTCCGGTACGCCATGTACAGCGCCAGCTGCGCCGTCCCCAGCGCGAACCCGATTGCATTCGGAATTCCGATGAAGTAGTCCTTGACGAGCAAGGAGTAGACGCTCCAGACGCCGCCGTTGAGGAAGAGGAAGAAGGAGAGGGAGAAGGGCATGTACTCCACGCTCCTCGTCTTCACCACCGTCCTCATCGCGGCCATCGGCGCANCGTACATGCCGATGGTGAGCGCCGCGCACA                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB657360             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         nTGCGCCTCCTTGTCGTCCTCGTCGTCGTCGCCGCCTTTCCCCGCCGGCTTCTTCGTCCTCCGGTACGCCATGTACAGCGCCAGCTGCGCCGTCCCCAGCGCGAACCCGATTGCATTCGGAATTCCGATGAAGTAGTCCTTGACGAGCAAGGAGTAGACGCTCCAGACGCCGCCGTTGAGGAAGAGGAAGAAGGAGAGGGAGAAGGGCATGTACTCCACGCTCCTCGTCTTCACCACCGTCCTCATCGCGGCCATCGGCGCAGCGTACATGCCGATGGTGAGCGCCGCGCACAGCACGCCGACCACGAACAGCCGCACGCCGCCGTGCAGCGCCACCAGCGCCACCGCCACCACCGCCGCCAGCGCGCCCACGTTCACGGCCAGCACCACCTTCACCATCTTCGCCTTGGTCTCCCTGGGGGCGTAGGCGAGGTAGAGCGTGACGTAGATGGCCTCGAGGGCGGCGCCGGAGCCGTTGACGGTGACGATGAGGAGACCGCCGGGCTTGTGGAGGCCGTAGAACGTCCACAGCGAGGTGCTCAGCAGCGTGGTCACGTACGGCAGCCACCTGAATTCCTCCGTGCTCTTGCTCCTCACGATCCTCCGGAAAGTCGCAATTGGAGACGCGAAGACCAGTATTGAGATTACGTTCCCTACGATTCCGACGAAGAAGCTTGGATCCGCCATTGCTGGAGCTAATTCTAGAAACAGAG]




>consensus_2338#0
TCTTTTTTTTTCGCAGACGGATCACTAAAGCGAATTTTCGCAGGCGCTGCTTAAGTGGTC
CATCAGGCTTCATCAAAATTCACCCCGATTTATATTTTTGTATGTGATCATTTGGCTCTA
AAGGTCATATCCGACTACGAAAATAAACCCCCACATCGAGAAAAATACTTTTTCTAATGT
CTATCTCCTGGACCGGCTGTCGTAGCCGGCGTGGTGCCCCCGGCGGCCACCGCCTCGTCG
TCGTCGTCGGGGACGGTGTCTAAGCGGTGGTGGTGGTGGTGGCCGCCGTGGTGCTGGTGG
AGGATGGAGTGGATCTCGATGGGGGTGGTGGAGAAGGACTTGATGATGCGGTCGAGCCCC
CCGTGAAGCGGCGCCGCCGGCTTGGGCAGGCTCAGGCTCAGCCCCTTGCGCAGCTGCTGG
TCCCTCCGCTGCTGCGCCATCTCCACCTGATGCCCCATCAGCCGCGCCACCCCCTGCGCC
TCCTCGTCGTCCTCGTCGTCGTCGCCGCCTTTCCCCGCCGGCTTCTTCGTCCTCCGGTAC
GCCATGTACAGCGCCAGCTGCGCCGTCCCCAGCGCGAACCCGATTGCATTCGGAATTCCG
ATGAAGTAGTCCTTGACGAGCAAGGAGTAGACGCTCCAGACGCCGCCGTTGAGGAAGAGG
AAGAAGGAGAGGGAGAAGGGCATGTACTCCACGCTCCTCGTCTTCACCACCGTCCTCATC
GCGGCCATCGGCGCANCGTACATGCCGATGGTGAGCGCCGCGCACAGCACGCCGACCACG
AACAGCCGCACGCCGCCGTGCAGCGCCACCAGCGCCACCGCCACCACCGCCGCCAGCGCG
CCCACGTTCACGGCCAGCACCACCTTCACCATCTTCGCCTTGGTCTCCCTGGGGGCGTAG
GCGAGGTAGAGCGTGACGTAGATGGCCTCGAGGGCGGCGCCGGAGCCGTTGACGGTGACG
ATGAGGAGACCGCCGGGCTTGTGGAGGCCGTAGAACGTCCACAGCGAGGTGCTCAGCAGC
GTGGTCACGTACGGCAGCCACCTGAATTCCTCCGTGCTCTTGCTCCTCACGATCCTCCGG
AAAGTCGCAATTGGAGACGCGAAGACCAGTATTGAGATTACGTTCCCTACGATTCCGACG
AAGAAGCTTGGATCCGCCATTGCTGGAGCTAATTCTAGAAACAGAG

clustalw multiple alignements is not computed in this case