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Oryza sativa
cluster # 2343 cluster # 2343       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2343#0 length = 1681 sequences # 1  
consensus_2343#1 length = 1502 sequences # 1  

consensusID : consensus_2343#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1681
fasta sequence
                              [CTCTGCGCCAGCGACGTGTTCGATCAATTGCCTCCTCAACCACCGCCTCGCCATGGTGCTGAAGAAATCCACCGGCCGCTCTAGCGGCCACGCCTCGACGTCGTACGATGCCTCCGCTGGCGGCGGCGCTGTGGCTGTGAGCGCGTATGAGCAGAGGATCCGTCGTAATGCCGCCGTGCTCGAGAAGGTCGCCGTTTCGGTGCACGACAGCCTGGCGTCGACGCGGGAGGCGGCGCTGGCGGAGCTCATCGCCGCGCTCGAGGGCTTCCTCTCCGCCGACGACGCGGAGGGTGGGCACACCGACGAGATCCTGCGCGGCTGCTACGTCTCCATCAAGAAGAGGGCCGCCAGGGAGGCCTGCGTGGCGCTCCGCGCCGTCGCGCTGCTCGCCGTCACGCTCGGCCCCGGCGCCACCTCGAAGAAGATCGCGGCGGTGGAGACGGCGGCGAACCCGCTCGGCTCCGGCGCGAATAAGATCATGAAGGCGACGTACCCGCTCGCCTCCCGGATTCTCGAGGCGCCACAAGCCGACGCGTCCCTGGTGGTCGCCGCGCTCGAGTGCCTCGCCGTCGTCGCGTTCGTCGACGTCGCCGCGGAGAACATGGACGACACGGAGGCGTGCATGAACGCGCTGTGGGCGGTGATCTGCCCGAGCGCGGGGCCCAAGCTCGCCAGCGCGGCGAAGGGGACGGCGAGCCCCCGCGTGCTGGCCGCCGCCGTGTCGGCGTGGACGCTCGTCCTGACCACCACCGGCGGGTGGAACAAGAAGAAGAAGGTGTCCCCCGCCGCGCCATGGCGAGGCGCGGCGGCTCACGCGCACCTCGTCTCCCTCCTCGGCTCCGACAGCCGCGAGGTCCGGATGGCCGCCGGCGAGGCGCTGGCCGTCGCCATCGAGATGAAGCTCTTCACCGAGAAAAACAATGGCGCCCTCTTCTCCAAGATGGAGGCCAGAGCTTCCGACCTCGCCAACGACGCCGCCGGAGCGGGCGTCGACAAGACCAACTTCGTCGAGCAGAAGGAGCTCTTCAAGGACATCACGACGTTCCTCGCCGGCGGCAAGCCCCCGGTGATCTCGGTCCGCACGTCGTCGTCCAACTACGGCCTCCTCACGACGTCGACATGGACGGACAATGTCCGGCTCAACTTCCTCCGGCGATTCCTCGCCGGCGGCTTCCTGCACCACCTCCAGGGGAAGGGTCTGATGGGCCAGGTGTTCGTCATCGACGACGACGAGGTCACCGGGAAGCTGTCGGCGGCGAGGTCGAAGCGGAGCCTGATGAAGGACACCCGCATTGTGAAGGAGTTGAACGGCGGCCGTGGCGGCGGCGGCGGCGCCATGGATGAGAAGAAGGAGAAGAAGCAGGAGATGATCAAGAACTCGCTGGAGAAGAAGAGGACAGTTAAGAAGGAGCGGCTAATAGCCCATGAGCTCAAGCATGGATCATCTGATCTATGAAACAAGGAAAGGAATTATGGATAATTTAATTAGGGTTGCATTTCATATATATGATTTATCTTTTTTAGGGTTTATAGGGCAGTCTTTTAGGGTTAATTACTAGATGCAACGTACTGCTTGGTTTCCCTTTCAATATCACTATGTTATTTTCGTATTATTGTCATGTTCATTCATGGTCCACAATTGTACTTGGGAGTTACATTCACCACGATTCAATCACGCTAA]

[+] EMBL AK064689             [CTCTGCGCCAGCGACGTGTTCGATCAATTGCCTCCTCAACCACCGCCTCGCCATGGTGCTGAAGAAATCCACCGGCCGCTCTAGCGGCCACGCCTCGACGTCGTACGATGCCTCCGCTGGCGGCGGCGCTGTGGCTGTGAGCGCGTATGAGCAGAGGATCCGTCGTAATGCCGCCGTGCTCGAGAAGGTCGCCGTTTCGGTGCACGACAGCCTGGCGTCGACGCGGGAGGCGGCGCTGGCGGAGCTCATCGCCGCGCTCGAGGGCTTCCTCTCCGCCGACGACGCGGAGGGTGGGCACACCGACGAGATCCTGCGCGGCTGCTACGTCTCCATCAAGAAGAGGGCCGCCAGGGAGGCCTGCGTGGCGCTCCGCGCCGTCGCGCTGCTCGCCGTCACGCTCGGCCCCGGCGCCACCTCGAAGAAGATCGCGGCGGTGGAGACGGCGGCGAACCCGCTCGGCTCCGGCGCGAATAAGATCATGAAGGCGACGTACCCGCTCGCCTCCCGGATTCTCGAGGCGCCACAAGCCGACGCGTCCCTGGTGGTCGCCGCGCTCGAGTGCCTCGCCGTCGTCGCGTTCGTCGACGTCGCCGCGGAGAACATGGACGACACGGAGGCGTGCATGAACGCGCTGTGGGCGGTGATCTGCCCGAGCGCGGGGCCCAAGCTCGCCAGCGCGGCGAAGGGGACGGCGAGCCCCCGCGTGCTGGCCGCCGCCGTGTCGGCGTGGACGCTCGTCCTGACCACCACCGGCGGGTGGAACAAGAAGAAGAAGGTGTCCCCCGCCGCGCCATGGCGAGGCGCGGCGGCTCACGCGCACCTCGTCTCCCTCCTCGGCTCCGACAGCCGCGAGGTCCGGATGGCCGCCGGCGAGGCGCTGGCCGTCGCCATCGAGATGAAGCTCTTCACCGAGAAAAACAATGGCGCCCTCTTCTCCAAGATGGAGGCCAGAGCTTCCGACCTCGCCAACGACGCCGCCGGAGCGGGCGTCGACAAGACCAACTTCGTCGAGCAGAAGGAGCTCTTCAAGGACATCACGACGTTCCTCGCCGGCGGCAAGCCCCCGGTGATCTCGGTCCGCACGTCGTCGTCCAACTACGGCCTCCTCACGACGTCGACATGGACGGACAATGTCCGGCTCAACTTCCTCCGGCGATTCCTCGCCGGCGGCTTCCTGCACCACCTCCAGGGGAAGGGTCTGATGGGCCAGGTGTTCGTCATCGACGACGACGAGGTCACCGGGAAGCTGTCGGCGGCGAGGTCGAAGCGGAGCCTGATGAAGGACACCCGCATTGTGAAGGAGTTGAACGGCGGCCGTGGCGGCGGCGGCGGCGCCATGGATGAGAAGAAGGAGAAGAAGCAGGAGATGATCAAGAACTCGCTGGAGAAGAAGAGGACAGTTAAGAAGGAGCGGCTAATAGCCCATGAGCTCAAGCATGGATCATCTGATCTATGAAACAAGGAAAGGAATTATGGATAATTTAATTAGGGTTGCATTTCATATATATGATTTATCTTTTTTAGGGTTTATAGGGCAGTCTTTTAGGGTTAATTACTAGATGCAACGTACTGCTTGGTTTCCCTTTCAATATCACTATGTTATTTTCGTATTATTGTCATGTTCATTCATGGTCCACAATTGTACTTGGGAGTTACATTCACCACGATTCAATCACGCTAA]


>consensus_2343#0 CTCTGCGCCAGCGACGTGTTCGATCAATTGCCTCCTCAACCACCGCCTCGCCATGGTGCT GAAGAAATCCACCGGCCGCTCTAGCGGCCACGCCTCGACGTCGTACGATGCCTCCGCTGG CGGCGGCGCTGTGGCTGTGAGCGCGTATGAGCAGAGGATCCGTCGTAATGCCGCCGTGCT CGAGAAGGTCGCCGTTTCGGTGCACGACAGCCTGGCGTCGACGCGGGAGGCGGCGCTGGC GGAGCTCATCGCCGCGCTCGAGGGCTTCCTCTCCGCCGACGACGCGGAGGGTGGGCACAC CGACGAGATCCTGCGCGGCTGCTACGTCTCCATCAAGAAGAGGGCCGCCAGGGAGGCCTG CGTGGCGCTCCGCGCCGTCGCGCTGCTCGCCGTCACGCTCGGCCCCGGCGCCACCTCGAA GAAGATCGCGGCGGTGGAGACGGCGGCGAACCCGCTCGGCTCCGGCGCGAATAAGATCAT GAAGGCGACGTACCCGCTCGCCTCCCGGATTCTCGAGGCGCCACAAGCCGACGCGTCCCT GGTGGTCGCCGCGCTCGAGTGCCTCGCCGTCGTCGCGTTCGTCGACGTCGCCGCGGAGAA CATGGACGACACGGAGGCGTGCATGAACGCGCTGTGGGCGGTGATCTGCCCGAGCGCGGG GCCCAAGCTCGCCAGCGCGGCGAAGGGGACGGCGAGCCCCCGCGTGCTGGCCGCCGCCGT GTCGGCGTGGACGCTCGTCCTGACCACCACCGGCGGGTGGAACAAGAAGAAGAAGGTGTC CCCCGCCGCGCCATGGCGAGGCGCGGCGGCTCACGCGCACCTCGTCTCCCTCCTCGGCTC CGACAGCCGCGAGGTCCGGATGGCCGCCGGCGAGGCGCTGGCCGTCGCCATCGAGATGAA GCTCTTCACCGAGAAAAACAATGGCGCCCTCTTCTCCAAGATGGAGGCCAGAGCTTCCGA CCTCGCCAACGACGCCGCCGGAGCGGGCGTCGACAAGACCAACTTCGTCGAGCAGAAGGA GCTCTTCAAGGACATCACGACGTTCCTCGCCGGCGGCAAGCCCCCGGTGATCTCGGTCCG CACGTCGTCGTCCAACTACGGCCTCCTCACGACGTCGACATGGACGGACAATGTCCGGCT CAACTTCCTCCGGCGATTCCTCGCCGGCGGCTTCCTGCACCACCTCCAGGGGAAGGGTCT GATGGGCCAGGTGTTCGTCATCGACGACGACGAGGTCACCGGGAAGCTGTCGGCGGCGAG GTCGAAGCGGAGCCTGATGAAGGACACCCGCATTGTGAAGGAGTTGAACGGCGGCCGTGG CGGCGGCGGCGGCGCCATGGATGAGAAGAAGGAGAAGAAGCAGGAGATGATCAAGAACTC GCTGGAGAAGAAGAGGACAGTTAAGAAGGAGCGGCTAATAGCCCATGAGCTCAAGCATGG ATCATCTGATCTATGAAACAAGGAAAGGAATTATGGATAATTTAATTAGGGTTGCATTTC ATATATATGATTTATCTTTTTTAGGGTTTATAGGGCAGTCTTTTAGGGTTAATTACTAGA TGCAACGTACTGCTTGGTTTCCCTTTCAATATCACTATGTTATTTTCGTATTATTGTCAT GTTCATTCATGGTCCACAATTGTACTTGGGAGTTACATTCACCACGATTCAATCACGCTA A



consensusID : consensus_2343#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1502
fasta sequence
                              [CCTCCCAAAGTGTTCGATCGATTGCCTCAACCACCCGCTCACTGCGCAGGCGACCTGTTCGATCAATTGCCTAGACCAGTCAACCACCGCTCACCATGGTACTGGGGAAATCCATTCGCCGCTCTAACGGCCACGCCTCGTCGTCGTCGTCCATACTGGACGGCGATGACACCAGCAGCGCTAGCGGTGGCGGCATGAGCATCTACTACCAGAAGATTAATCAGAGAGTCGCCGTTCTCGAGAAGGTCGCCGTCTCCGTGCACGAGAGCCGGGCGTCCACGCGGGAGGCGGCGCTGGCGTCGCTCGTCGGCGCGCTCGAGGGCTTCGTCCCCGCCCACTTCATCGGGTGGCACCTACGCGGTGAGATCGTTCGCGGCTGCTGCGCCTCCATCAAGAAGGGAGCCGCCGCCAAGGAGGCCCGCCTCGCGCTCCGCGCCGTCGCGCTGCTCGCCGTCACGCTCGGCCCGGGCTCCAAGAGGAGGATCTTGCCGGCGGAGACGTACAACCCGCTCGAACCCGGCCCTGGCTCGAAGAAGATCATGGCGGAGACGTTCCCGCTCGTCTCCCGGATCCTCGAGGTGTCAACCGACGCGCCCCTGGTGATCGCCGCGCTCGAGTCCCTCGCCGTCGTCGCGTTCGTCGACGTCGCCGCGGAGAACATGGACGACACGGAGGCGTGCATGAAGGCGCTGTGGGGGCTGATCCGCCCAAGCACGGGGCCCAAGGTCGCCGGCGTGGCGAGGAAGACGAGCCCTCATGTCCTGGCCGCCGCCGTGTCGGCGTGGACGCTCGTGCTGACCACCACCGACGGCTGGAAGAAGAAGAAGGCGGCGGCGTCCTCTCCCGCCGCGTGGCGCGACACGGCGGCGCACCTCGCCTCGCTCCTCCACTCCGACAGCCGCGCCGTCCGAATGGCCGCCGGCGAGGCTCTCGCCGTCACCATCGAGATGAAGCTCCTGACCCGGGACAGCAACGGCGCCCTCATCTCCGGCGTGGCGGCCAGAGCGTCCGAGCTCGCCAACGAAGCCGCCGGAGCGGGCGTCGGCAAGGCCAACTTCGTCGAGCAGAAGGAGCTCTTCAATAGCATCACGACGTTCCTCGCCGGCGGCAAGGCACCGGCGAGCTCGGTGCGCGCGTCGTCGTCCCACCACGGGCGGCTGACGGCGTCGACATGGACGGACATTGTCCGGCTCAACTTCCTCCGGCGATTCCTCGGCGGCGGGTTCCTGCCGCACCTCCAGGGGAAGGTGCTGATGGGGGAGGAGGCGCCGCTGATAGGGCAGGTGTTCGTCGTCAAGGAGGACGACATGGCCATGGATCACAAGAAGAAGGTGGAGAAGCAGAGGACGCTCAACAGGGAGCGCTCCATTGTCTCTGACCTCAAGCATGGATCTTCTCATGTATGAAAACTAGGAAAGGAATTTTGGGCAAAGCTGAGTCAGTGCATGTAAAGTTATGTACAAAACGATTTATGTTTGAGAATAAATTGGGCCAATTATAGA]

[+] EMBL AK109684             [CCTCCCAAAGTGTTCGATCGATTGCCTCAACCACCCGCTCACTGCGCAGGCGACCTGTTCGATCAATTGCCTAGACCAGTCAACCACCGCTCACCATGGTACTGGGGAAATCCATTCGCCGCTCTAACGGCCACGCCTCGTCGTCGTCGTCCATACTGGACGGCGATGACACCAGCAGCGCTAGCGGTGGCGGCATGAGCATCTACTACCAGAAGATTAATCAGAGAGTCGCCGTTCTCGAGAAGGTCGCCGTCTCCGTGCACGAGAGCCGGGCGTCCACGCGGGAGGCGGCGCTGGCGTCGCTCGTCGGCGCGCTCGAGGGCTTCGTCCCCGCCCACTTCATCGGGTGGCACCTACGCGGTGAGATCGTTCGCGGCTGCTGCGCCTCCATCAAGAAGGGAGCCGCCGCCAAGGAGGCCCGCCTCGCGCTCCGCGCCGTCGCGCTGCTCGCCGTCACGCTCGGCCCGGGCTCCAAGAGGAGGATCTTGCCGGCGGAGACGTACAACCCGCTCGAACCCGGCCCTGGCTCGAAGAAGATCATGGCGGAGACGTTCCCGCTCGTCTCCCGGATCCTCGAGGTGTCAACCGACGCGCCCCTGGTGATCGCCGCGCTCGAGTCCCTCGCCGTCGTCGCGTTCGTCGACGTCGCCGCGGAGAACATGGACGACACGGAGGCGTGCATGAAGGCGCTGTGGGGGCTGATCCGCCCAAGCACGGGGCCCAAGGTCGCCGGCGTGGCGAGGAAGACGAGCCCTCATGTCCTGGCCGCCGCCGTGTCGGCGTGGACGCTCGTGCTGACCACCACCGACGGCTGGAAGAAGAAGAAGGCGGCGGCGTCCTCTCCCGCCGCGTGGCGCGACACGGCGGCGCACCTCGCCTCGCTCCTCCACTCCGACAGCCGCGCCGTCCGAATGGCCGCCGGCGAGGCTCTCGCCGTCACCATCGAGATGAAGCTCCTGACCCGGGACAGCAACGGCGCCCTCATCTCCGGCGTGGCGGCCAGAGCGTCCGAGCTCGCCAACGAAGCCGCCGGAGCGGGCGTCGGCAAGGCCAACTTCGTCGAGCAGAAGGAGCTCTTCAATAGCATCACGACGTTCCTCGCCGGCGGCAAGGCACCGGCGAGCTCGGTGCGCGCGTCGTCGTCCCACCACGGGCGGCTGACGGCGTCGACATGGACGGACATTGTCCGGCTCAACTTCCTCCGGCGATTCCTCGGCGGCGGGTTCCTGCCGCACCTCCAGGGGAAGGTGCTGATGGGGGAGGAGGCGCCGCTGATAGGGCAGGTGTTCGTCGTCAAGGAGGACGACATGGCCATGGATCACAAGAAGAAGGTGGAGAAGCAGAGGACGCTCAACAGGGAGCGCTCCATTGTCTCTGACCTCAAGCATGGATCTTCTCATGTATGAAAACTAGGAAAGGAATTTTGGGCAAAGCTGAGTCAGTGCATGTAAAGTTATGTACAAAACGATTTATGTTTGAGAATAAATTGGGCCAATTATAGA]


>consensus_2343#1 CCTCCCAAAGTGTTCGATCGATTGCCTCAACCACCCGCTCACTGCGCAGGCGACCTGTTC GATCAATTGCCTAGACCAGTCAACCACCGCTCACCATGGTACTGGGGAAATCCATTCGCC GCTCTAACGGCCACGCCTCGTCGTCGTCGTCCATACTGGACGGCGATGACACCAGCAGCG CTAGCGGTGGCGGCATGAGCATCTACTACCAGAAGATTAATCAGAGAGTCGCCGTTCTCG AGAAGGTCGCCGTCTCCGTGCACGAGAGCCGGGCGTCCACGCGGGAGGCGGCGCTGGCGT CGCTCGTCGGCGCGCTCGAGGGCTTCGTCCCCGCCCACTTCATCGGGTGGCACCTACGCG GTGAGATCGTTCGCGGCTGCTGCGCCTCCATCAAGAAGGGAGCCGCCGCCAAGGAGGCCC GCCTCGCGCTCCGCGCCGTCGCGCTGCTCGCCGTCACGCTCGGCCCGGGCTCCAAGAGGA GGATCTTGCCGGCGGAGACGTACAACCCGCTCGAACCCGGCCCTGGCTCGAAGAAGATCA TGGCGGAGACGTTCCCGCTCGTCTCCCGGATCCTCGAGGTGTCAACCGACGCGCCCCTGG TGATCGCCGCGCTCGAGTCCCTCGCCGTCGTCGCGTTCGTCGACGTCGCCGCGGAGAACA TGGACGACACGGAGGCGTGCATGAAGGCGCTGTGGGGGCTGATCCGCCCAAGCACGGGGC CCAAGGTCGCCGGCGTGGCGAGGAAGACGAGCCCTCATGTCCTGGCCGCCGCCGTGTCGG CGTGGACGCTCGTGCTGACCACCACCGACGGCTGGAAGAAGAAGAAGGCGGCGGCGTCCT CTCCCGCCGCGTGGCGCGACACGGCGGCGCACCTCGCCTCGCTCCTCCACTCCGACAGCC GCGCCGTCCGAATGGCCGCCGGCGAGGCTCTCGCCGTCACCATCGAGATGAAGCTCCTGA CCCGGGACAGCAACGGCGCCCTCATCTCCGGCGTGGCGGCCAGAGCGTCCGAGCTCGCCA ACGAAGCCGCCGGAGCGGGCGTCGGCAAGGCCAACTTCGTCGAGCAGAAGGAGCTCTTCA ATAGCATCACGACGTTCCTCGCCGGCGGCAAGGCACCGGCGAGCTCGGTGCGCGCGTCGT CGTCCCACCACGGGCGGCTGACGGCGTCGACATGGACGGACATTGTCCGGCTCAACTTCC TCCGGCGATTCCTCGGCGGCGGGTTCCTGCCGCACCTCCAGGGGAAGGTGCTGATGGGGG AGGAGGCGCCGCTGATAGGGCAGGTGTTCGTCGTCAAGGAGGACGACATGGCCATGGATC ACAAGAAGAAGGTGGAGAAGCAGAGGACGCTCAACAGGGAGCGCTCCATTGTCTCTGACC TCAAGCATGGATCTTCTCATGTATGAAAACTAGGAAAGGAATTTTGGGCAAAGCTGAGTC AGTGCATGTAAAGTTATGTACAAAACGATTTATGTTTGAGAATAAATTGGGCCAATTATA GA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2343#0      ---------------------------------------CTCTGCGCCAGCGACGTGTTC 21
consensus_2343#1      CCTCCCAAAGTGTTCGATCGATTGCCTCAACCACCCGCTCACTGCGCAGGCGACCTGTTC 60
                                                             * ******  ***** *****

consensus_2343#0      GATCAATTGCCT---CC--TCAACCACCGCCTCGCCATGGTGCTGAAGAAATCCACCGGC 76
consensus_2343#1      GATCAATTGCCTAGACCAGTCAACCACCGC-TCACCATGGTACTGGGGAAATCCATTCGC 119
                      ************   **  *********** ** ******* ***  ********   **

consensus_2343#0      CGCTCTAGCGGCCACGCCTCGACGTCGT---------------ACGATGCCTCCGCTGGC 121
consensus_2343#1      CGCTCTAACGGCCACGCCTCGTCGTCGTCGTCCATACTGGACGGCGATGACACCAGCAGC 179
                      ******* ************* ******                ***** * **    **

consensus_2343#0      GGCGGCGCTGTGGCTGTGAGCGCGTATGAGCAGAGGATCCGTCGTAATGCCGCCGTGCTC 181
consensus_2343#1      GCTAGCGGTGGCGGCATGAGCATCTACTACCAGAAGATTAATCAGAGAGTCGCCGTTCTC 239
                      *   *** **  *   *****   **  * **** ***   **  *  * ****** ***

consensus_2343#0      GAGAAGGTCGCCGTTTCGGTGCACGACAGCCTGGCGTCGACGCGGGAGGCGGCGCTGGCG 241
consensus_2343#1      GAGAAGGTCGCCGTCTCCGTGCACGAGAGCCGGGCGTCCACGCGGGAGGCGGCGCTGGCG 299
                      ************** ** ******** **** ****** *********************

consensus_2343#0      GAGCTCATCGCCGCGCTCGAGGGCTTCCTCTCCGCCGACGACG-CGGAGGGTGGGCACAC 300
consensus_2343#1      TCGCTCGTCGGCGCGCTCGAGGGCTTCGTCCCCGCCCACTTCATCGGGTGGCACCTACGC 359
                        **** *** **************** ** ***** **  *  ***  **     ** *

consensus_2343#0      CGACGAGATCCTGCGCGGCTGCTACGTCTCCATCAAGAAGAGGGCCGCC---AGGGAGGC 357
consensus_2343#1      -GGTGAGATCGTTCGCGGCTGCTGCGCCTCCATCAAGAAGGGAGCCGCCGCCAAGGAGGC 418
                       *  ****** * ********** ** ************* * ******   * ******

consensus_2343#0      CTGCGTGGCGCTCCGCGCCGTCGCGCTGCTCGCCGTCACGCTCGGCCCCGGCGCCACCTC 417
consensus_2343#1      CCGCCTCGCGCTCCGCGCCGTCGCGCTGCTCGCCGTCACGCTCGGCCCGGGCTCCA---A 475
                      * ** * ***************************************** *** ***    

consensus_2343#0      GAAGAAGATCGCGGCGGTGGAGACG-GCGGCGAACCCG--CTCGGCTCCGGCGCGAATAA 474
consensus_2343#1      GAGGAGGATCTTGCCGGCGGAGACGTACAACCCGCTCGAACCCGGCCCTGGCTCGAAGAA 535
                      ** ** ****  * *** *******  *  *   * **  * **** * *** **** **

consensus_2343#0      GATCATGAAGGCGACGTACCCGCTCGCCTCCCGGATTCTCGAGGCGCCACAAGCCGACGC 534
consensus_2343#1      GATCATGGCGGAGACGTTCCCGCTCGTCTCCCGGATCCTCGAGGTGTC---AACCGACGC 592
                      *******  ** ***** ******** ********* ******* * *   * *******

consensus_2343#0      GTCCCTGGTGGTCGCCGCGCTCGAGTGCCTCGCCGTCGTCGCGTTCGTCGACGTCGCCGC 594
consensus_2343#1      GCCCCTGGTGATCGCCGCGCTCGAGTCCCTCGCCGTCGTCGCGTTCGTCGACGTCGCCGC 652
                      * ******** *************** *********************************

consensus_2343#0      GGAGAACATGGACGACACGGAGGCGTGCATGAACGCGCTGTGGGCGGTGATCTGCCCGAG 654
consensus_2343#1      GGAGAACATGGACGACACGGAGGCGTGCATGAAGGCGCTGTGGGGGCTGATCCGCCCAAG 712
                      ********************************* ********** * ***** **** **

consensus_2343#0      CGCGGGGCCCAAGCTCGCCAGCGCGGCGAAGGGGACGGCGAGCCCCCGCGTGCTGGCCGC 714
consensus_2343#1      CACGGGGCCCAAGGTCGCCGGCGTGGCGA---GGAAGACGAGCCCTCATGTCCTGGCCGC 769
                      * *********** ***** *** *****   *** * ******* *  ** ********

consensus_2343#0      CGCCGTGTCGGCGTGGACGCTCGTCCTGACCACCACCGGCGGGTGGAACAAGAAGAAGAA 774
consensus_2343#1      CGCCGTGTCGGCGTGGACGCTCGTGCTGACCACCACCGACGGCTGGAAGAAGAAGAAGGC 829
                      ************************ ************* *** ***** *********  

consensus_2343#0      GGTG---TCCCCCGCCGCGCCATGGCGAGGCGCGGCGGCTCACGCGCACCTCGTCTCCCT 831
consensus_2343#1      GGCGGCGTCCTCTCCCGCCGCGTGGCGCGACACGGCGGC------GCACCTCGCCTCGCT 883
                      ** *   *** *  ****  * ***** * * *******      ******** *** **

consensus_2343#0      CCTCGGCTCCGACAGCCGCGAGGTCCGGATGGCCGCCGGCGAGGCGCTGGCCGTCGCCAT 891
consensus_2343#1      CCTCCACTCCGACAGCCGCGCCGTCCGAATGGCCGCCGGCGAGGCTCTCGCCGTCACCAT 943
                      ****  **************  ***** ***************** ** ****** ****

consensus_2343#0      CGAGATGAAGCTCTTCACCGAGAAAAACAATGGCGCCCTCTTCTCCAAGATGGAGGCCAG 951
consensus_2343#1      CGAGATGAAGCTCCTGACCCGGGACAGCAACGGCGCCCTCATCTCCGGCGTGGCGGCCAG 1003
                      ************* * ***  * * * *** ********* *****    *** ******

consensus_2343#0      AGCTTCCGACCTCGCCAACGACGCCGCCGGAGCGGGCGTCGACAAGACCAACTTCGTCGA 1011
consensus_2343#1      AGCGTCCGAGCTCGCCAACGAAGCCGCCGGAGCGGGCGTCGGCAAGGCCAACTTCGTCGA 1063
                      *** ***** *********** ******************* **** *************

consensus_2343#0      GCAGAAGGAGCTCTTCAAGGACATCACGACGTTCCTCGCCGGCGGCAAGCCCCCGGTGAT 1071
consensus_2343#1      GCAGAAGGAGCTCTTCAATAGCATCACGACGTTCCTCGCCGGCGGCAAGGCACCGGCGAG 1123
                      ******************   **************************** * **** ** 

consensus_2343#0      CTCGGTCCGCACGTCGTCGTCCAACTACGGCCTCCTCACGACGTCGACATGGACGGACAA 1131
consensus_2343#1      CTCGGTGCGCGCGTCGTCGTCCCACCACGGGCGGCTGACGGCGTCGACATGGACGGACAT 1183
                      ****** *** *********** ** **** *  ** *** ****************** 

consensus_2343#0      TGTCCGGCTCAACTTCCTCCGGCGATTCCTCGCCGGCGGCTTCCTGCACCACCTCCAGGG 1191
consensus_2343#1      TGTCCGGCTCAACTTCCTCCGGCGATTCCTCGGCGGCGGGTTCCTGCCGCACCTCCAGGG 1243
                      ******************************** ****** *******  ***********

consensus_2343#0      GAAGGGTCTGATGGGCCAGGTGTTCGTCATCGACGACGACGAGGTCACCGGGAAGCTGTC 1251
consensus_2343#1      GAAGGTGCTGATGGG--------------------------------------------- 1258
                      *****  ********                                             

consensus_2343#0      GGCGGCGAGGTCGAAGCGGAGCCTGATGAAGGACACCCGCATTGTGAAGGAGTTGAACGG 1311
consensus_2343#1      GGAGGAGGCGCCG---------CTGATAGGGCAGGTGTTCGTCGTCAAGGAG-------- 1301
                      ** ** *  * **         *****   * *      * * ** ******        

consensus_2343#0      CGGCCGTGGCGGCGGCGGCGGCGCCATGGATGAGAAGAAGGAGAAGAAGCAGGAGATGAT 1371
consensus_2343#1      -------------GACGACATGGCCATGGATCACAAGAAGAAGG---------------- 1332
                                   * ** *   ********* * ****** **                 

consensus_2343#0      CAAGAACTCGCTGGAGAAGAAGAGGACAGTTAAGAAGGAGCGGCTAATAGCCCATGAGCT 1431
consensus_2343#1      -----------TGGAGAAGCAGAGGACGCTCAACAGGGAGCGCTCCATTGTCTCTGACCT 1381
                                 ******** *******  * ** * ******    ** * *  *** **

consensus_2343#0      CAAGCATGGATCATCTGATCTATGAAA-CAAGGAAAGGAATTATGGATAATTTAATTAGG 1490
consensus_2343#1      CAAGCATGGATCTTCTCATGTATGAAAACTAGGAAAGGAATTTTGGGCA----AAGCTGA 1437
                      ************ *** ** ******* * ************ ***  *    **   * 

consensus_2343#0      GTTGCATTTCATATATATGATTTATCTTTTTTAGGGTTTATAGGGCAGTCTTT-TAGGGT 1549
consensus_2343#1      GT--CAGTGCATGTA---AAGTTATGTACAAAACGATTTATGTTTGAGAATAAATTGGGC 1492
                      **  ** * *** **    * **** *     * * *****     **  *   * *** 

consensus_2343#0      TAATTACTAGATGCAACGTACTGCTTGGTTTCCCTTTCAATATCACTATGTTATTTTCGT 1609
consensus_2343#1      CAATTA-TAGA------------------------------------------------- 1502
                       ***** ****                                                 

consensus_2343#0      ATTATTGTCATGTTCATTCATGGTCCACAATTGTACTTGGGAGTTACATTCACCACGATT 1669
consensus_2343#1      ------------------------------------------------------------
                                                                                  

consensus_2343#0      CAATCACGCTAA 1681
consensus_2343#1      ------------
                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)