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Oryza sativa
cluster # 2364 cluster # 2364       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2364#0 length = 2667 sequences # 1  
consensus_2364#1 length = 1694 sequences # 1  

consensusID : consensus_2364#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2667
fasta sequence
                              [GACGAAACGTCAGTCCTGATGAGTCTCTCTCTACTCTCTCTCCTGCCGCCTCGCCAAAACGGAAACGAGAGGGCTGAGGGCTCCATGGAGATCGCGGTTTCGATGTCGGCGAGGCGCCGTGAACTCGCAGCCGGCGGTGGCAGGCCAGCCGTTGGGCGTGAAGGAACAGTAGCGGGCTAATATCCGGCCACAAGACGGCGACCGCCGCCGGGGGAGTGCCGCTTGGTGGCGGTGCGCGCCACCCGTTCGGCGGAATGCCCAGCGGGACTTCGCCACGGACGGGCGGCTCGCCGCACGCCGCTTCAGTCGATCGCGAGCACGATCCACACCTCGAGGATTTGTAAGTGACCCAATCTGTACGGGATTCCAACTAATTCAGAATTCAAGTCCGACGGGGGCGGAGTGCACGGGGACCTCACCATCACTGCAGCGAGGATCCCTCTTGTTGCGTCTGCTATCGATTCTTCGATTTATGAGGTGTTATGTGCGCAAGTACATGCAACTATGGACAAAATTGGAACAGAGCTACGATTACACATGAGACGGACGACAACCACTCTTGCACTGCATAAGGAGCATGCCAGTTGCTTACATTTGGTGGAATGATCTTCTCGAGTGGCTTCTTCTGTGGCAATGAAGGGTCAGTGAGCGATGGCAGCCGGAACTCGTGCATCATCCAGTCAGTTTTGACGCCTTTAGCTGCTCTGCCCTTGTAGAAGACAAGGGACTTCTTCAAGCCTATGCACTTTGATCCATCGGAGGAGTAGATTGGCCTATCGGTTCCAGTGGCCTTCCAGAAACCTGCTCCAGTCACCCTGTTTGGCCTTGTGCTGTTCCGAGAACGGAAAAAAGAATGAAAATGGAAGTAACAAATCTTACTTGGGAGATCCCATGGATCATACTTGTAGATGTCCAGCTGCCTGATGAGCTCAATGGGAAGAGACTTCTGCTGGATTTTCCTTCTAAGGTAGAATCTGACGAGCTCTTCATCCGTTGGATGAAACCTGAAGCCAGGGTCTCTTTGGTCTTTACTCCATGACGAGGATCTCGATGAGCTGTACAACTTCAGCAGTAATTTTGGGATTAGCAATCTCTCTTATTACACTAAGTTAACTGAACTGTACTTATGCATCATTGCTTATATAGCTTAGCATCTAATCTAATAGAGTTCTCACATATGCCTCATTTCTTATAATTAGACCTTTGAGAGAATAATCTGACTCCTTAGATATTTGGATAATTATTTTTTTGTAGTTGTTTCCTTGGGTTGTCCATAGTGAACTATGTGGAACAATTCCCAAGACATCAGAGACTTCCAAATTCCAAGGACAATGTTTTGTGCCCATCTGTTCGTCGCTATTCTGAGGGTCCTTATTTTGTCAGCCCACCTGGTGTGTTCTTAGGCGCATCCCTTTCTTGGCTATTAACCATTTAACCTGCTCAGTCAGTTCTAGCTTCAAGGAACGGCCTGCCCATTCGTGCATATGGTGTTGCATTGGGCCCATCAACAGAACTTCTACAGACATTGATGCGAAAATCCTGCATGGATCCAAGTGCAGCCCTCTCATTCGTCCCTTGCATCAGGAAATTAAATTAGGAAAATTATGCAACCCAAAATCCCATGGGCCCAAGTTTTCCTTCCCTGTCGTCCAAGCACCCAACAGTTTGTCTGCCCTTTGCAGCATGGTGTCCTGGAATGGTCGTTCGAGCTGGTGACTGACCTGGTGAGCCAGGCGTATCTGCCTCTCTCCTCGACAGGCTTAATGGGCTGTCACCACCCATCTGGGCCGCAAAGAGAATCAAGTCTTCACCGCATATCGTTCTGATTGTTGCATTCACCGCTTCACGGGAGTTCAATCAAGTCTTTCGTGAATAATAATCTAAGAATATGCTTCTTTCTGTCCAGCAGCGGCCTGAAATTCGGTGACGACGGCGACCGACGGACATATGTTCAAGCCGACCGTGCATGGCCGGCGGGTCCCGGCGCCGGACGCACGCAAAGTCGAGCAATTAACGGCCACAGCTTCATCTTACACTGATGGCCGGGAGGCCATCCACGACGACATGCGGCAGCAACAGCAGACCTGACGATCAAGCAGCCATTGGGCGACTGTTTTGATATGCTCCGGGGACCACTGCACCCATGGCGATGCATCGGTCGAATAACAGCGACTCCTCCGGGTGATTTTCAGCTCCCAATGCAAGCTCGATCGTCCTGCGCTGTGAGGCCATGCATGATAGCGAAAATGGCTGTGGAGCAATAGGCGGCATGCTAGGCTTTACTGGCATGATTGTAGTACTGTATTCTCATCTATCCCAAGTTGGTTCCGCGCGAAGAATGTCGTCGCCGCCCTTAATTGTGTGGAAGTGTGGTCATCGTTGTCTCTTATTCCATATATGTTCATGGGTGGCACTAGCTAGTAGTGATAACAGTAGCCAGTGTTGAACGATCACTGTATGGTACATTGGTACAGATAGCTTGGTCTGTCAGCTAGGTGTTTTAATTGGTGCTTGGCGGTGGTGGAGAGGAAAAAAAAATCTTATGAGACCAGGTCCTATTTAGACTCTCAGGATATGTTTGTTCGAAAAAAATATGTAGTATAAATCACATATGTAATCCAGTGATCGATCTACCTCCAATATGTTTATTCGTGAAATAAAGTTTTC]

[+] EMBL AK065532             [GACGAAACGTCAGTCCTGATGAGTCTCTCTCTACTCTCTCTCCTGCCGCCTCGCCAAAACGGAAACGAGAGGGCTGAGGGCTCCATGGAGATCGCGGTTTCGATGTCGGCGAGGCGCCGTGAACTCGCAGCCGGCGGTGGCAGGCCAGCCGTTGGGCGTGAAGGAACAGTAGCGGGCTAATATCCGGCCACAAGACGGCGACCGCCGCCGGGGGAGTGCCGCTTGGTGGCGGTGCGCGCCACCCGTTCGGCGGAATGCCCAGCGGGACTTCGCCACGGACGGGCGGCTCGCCGCACGCCGCTTCAGTCGATCGCGAGCACGATCCACACCTCGAGGATTTGTAAGTGACCCAATCTGTACGGGATTCCAACTAATTCAGAATTCAAGTCCGACGGGGGCGGAGTGCACGGGGACCTCACCATCACTGCAGCGAGGATCCCTCTTGTTGCGTCTGCTATCGATTCTTCGATTTATGAGGTGTTATGTGCGCAAGTACATGCAACTATGGACAAAATTGGAACAGAGCTACGATTACACATGAGACGGACGACAACCACTCTTGCACTGCATAAGGAGCATGCCAGTTGCTTACATTTGGTGGAATGATCTTCTCGAGTGGCTTCTTCTGTGGCAATGAAGGGTCAGTGAGCGATGGCAGCCGGAACTCGTGCATCATCCAGTCAGTTTTGACGCCTTTAGCTGCTCTGCCCTTGTAGAAGACAAGGGACTTCTTCAAGCCTATGCACTTTGATCCATCGGAGGAGTAGATTGGCCTATCGGTTCCAGTGGCCTTCCAGAAACCTGCTCCAGTCACCCTGTTTGGCCTTGTGCTGTTCCGAGAACGGAAAAAAGAATGAAAATGGAAGTAACAAATCTTACTTGGGAGATCCCATGGATCATACTTGTAGATGTCCAGCTGCCTGATGAGCTCAATGGGAAGAGACTTCTGCTGGATTTTCCTTCTAAGGTAGAATCTGACGAGCTCTTCATCCGTTGGATGAAACCTGAAGCCAGGGTCTCTTTGGTCTTTACTCCATGACGAGGATCTCGATGAGCTGTACAACTTCAGCAGTAATTTTGGGATTAGCAATCTCTCTTATTACACTAAGTTAACTGAACTGTACTTATGCATCATTGCTTATATAGCTTAGCATCTAATCTAATAGAGTTCTCACATATGCCTCATTTCTTATAATTAGACCTTTGAGAGAATAATCTGACTCCTTAGATATTTGGATAATTATTTTTTTGTAGTTGTTTCCTTGGGTTGTCCATAGTGAACTATGTGGAACAATTCCCAAGACATCAGAGACTTCCAAATTCCAAGGACAATGTTTTGTGCCCATCTGTTCGTCGCTATTCTGAGGGTCCTTATTTTGTCAGCCCACCTGGTGTGTTCTTAGGCGCATCCCTTTCTTGGCTATTAACCATTTAACCTGCTCAGTCAGTTCTAGCTTCAAGGAACGGCCTGCCCATTCGTGCATATGGTGTTGCATTGGGCCCATCAACAGAACTTCTACAGACATTGATGCGAAAATCCTGCATGGATCCAAGTGCAGCCCTCTCATTCGTCCCTTGCATCAGGAAATTAAATTAGGAAAATTATGCAACCCAAAATCCCATGGGCCCAAGTTTTCCTTCCCTGTCGTCCAAGCACCCAACAGTTTGTCTGCCCTTTGCAGCATGGTGTCCTGGAATGGTCGTTCGAGCTGGTGACTGACCTGGTGAGCCAGGCGTATCTGCCTCTCTCCTCGACAGGCTTAATGGGCTGTCACCACCCATCTGGGCCGCAAAGAGAATCAAGTCTTCACCGCATATCGTTCTGATTGTTGCATTCACCGCTTCACGGGAGTTCAATCAAGTCTTTCGTGAATAATAATCTAAGAATATGCTTCTTTCTGTCCAGCAGCGGCCTGAAATTCGGTGACGACGGCGACCGACGGACATATGTTCAAGCCGACCGTGCATGGCCGGCGGGTCCCGGCGCCGGACGCACGCAAAGTCGAGCAATTAACGGCCACAGCTTCATCTTACACTGATGGCCGGGAGGCCATCCACGACGACATGCGGCAGCAACAGCAGACCTGACGATCAAGCAGCCATTGGGCGACTGTTTTGATATGCTCCGGGGACCACTGCACCCATGGCGATGCATCGGTCGAATAACAGCGACTCCTCCGGGTGATTTTCAGCTCCCAATGCAAGCTCGATCGTCCTGCGCTGTGAGGCCATGCATGATAGCGAAAATGGCTGTGGAGCAATAGGCGGCATGCTAGGCTTTACTGGCATGATTGTAGTACTGTATTCTCATCTATCCCAAGTTGGTTCCGCGCGAAGAATGTCGTCGCCGCCCTTAATTGTGTGGAAGTGTGGTCATCGTTGTCTCTTATTCCATATATGTTCATGGGTGGCACTAGCTAGTAGTGATAACAGTAGCCAGTGTTGAACGATCACTGTATGGTACATTGGTACAGATAGCTTGGTCTGTCAGCTAGGTGTTTTAATTGGTGCTTGGCGGTGGTGGAGAGGAAAAAAAAATCTTATGAGACCAGGTCCTATTTAGACTCTCAGGATATGTTTGTTCGAAAAAAATATGTAGTATAAATCACATATGTAATCCAGTGATCGATCTACCTCCAATATGTTTATTCGTGAAATAAAGTTTTC]


>consensus_2364#0 GACGAAACGTCAGTCCTGATGAGTCTCTCTCTACTCTCTCTCCTGCCGCCTCGCCAAAAC GGAAACGAGAGGGCTGAGGGCTCCATGGAGATCGCGGTTTCGATGTCGGCGAGGCGCCGT GAACTCGCAGCCGGCGGTGGCAGGCCAGCCGTTGGGCGTGAAGGAACAGTAGCGGGCTAA TATCCGGCCACAAGACGGCGACCGCCGCCGGGGGAGTGCCGCTTGGTGGCGGTGCGCGCC ACCCGTTCGGCGGAATGCCCAGCGGGACTTCGCCACGGACGGGCGGCTCGCCGCACGCCG CTTCAGTCGATCGCGAGCACGATCCACACCTCGAGGATTTGTAAGTGACCCAATCTGTAC GGGATTCCAACTAATTCAGAATTCAAGTCCGACGGGGGCGGAGTGCACGGGGACCTCACC ATCACTGCAGCGAGGATCCCTCTTGTTGCGTCTGCTATCGATTCTTCGATTTATGAGGTG TTATGTGCGCAAGTACATGCAACTATGGACAAAATTGGAACAGAGCTACGATTACACATG AGACGGACGACAACCACTCTTGCACTGCATAAGGAGCATGCCAGTTGCTTACATTTGGTG GAATGATCTTCTCGAGTGGCTTCTTCTGTGGCAATGAAGGGTCAGTGAGCGATGGCAGCC GGAACTCGTGCATCATCCAGTCAGTTTTGACGCCTTTAGCTGCTCTGCCCTTGTAGAAGA CAAGGGACTTCTTCAAGCCTATGCACTTTGATCCATCGGAGGAGTAGATTGGCCTATCGG TTCCAGTGGCCTTCCAGAAACCTGCTCCAGTCACCCTGTTTGGCCTTGTGCTGTTCCGAG AACGGAAAAAAGAATGAAAATGGAAGTAACAAATCTTACTTGGGAGATCCCATGGATCAT ACTTGTAGATGTCCAGCTGCCTGATGAGCTCAATGGGAAGAGACTTCTGCTGGATTTTCC TTCTAAGGTAGAATCTGACGAGCTCTTCATCCGTTGGATGAAACCTGAAGCCAGGGTCTC TTTGGTCTTTACTCCATGACGAGGATCTCGATGAGCTGTACAACTTCAGCAGTAATTTTG GGATTAGCAATCTCTCTTATTACACTAAGTTAACTGAACTGTACTTATGCATCATTGCTT ATATAGCTTAGCATCTAATCTAATAGAGTTCTCACATATGCCTCATTTCTTATAATTAGA CCTTTGAGAGAATAATCTGACTCCTTAGATATTTGGATAATTATTTTTTTGTAGTTGTTT CCTTGGGTTGTCCATAGTGAACTATGTGGAACAATTCCCAAGACATCAGAGACTTCCAAA TTCCAAGGACAATGTTTTGTGCCCATCTGTTCGTCGCTATTCTGAGGGTCCTTATTTTGT CAGCCCACCTGGTGTGTTCTTAGGCGCATCCCTTTCTTGGCTATTAACCATTTAACCTGC TCAGTCAGTTCTAGCTTCAAGGAACGGCCTGCCCATTCGTGCATATGGTGTTGCATTGGG CCCATCAACAGAACTTCTACAGACATTGATGCGAAAATCCTGCATGGATCCAAGTGCAGC CCTCTCATTCGTCCCTTGCATCAGGAAATTAAATTAGGAAAATTATGCAACCCAAAATCC CATGGGCCCAAGTTTTCCTTCCCTGTCGTCCAAGCACCCAACAGTTTGTCTGCCCTTTGC AGCATGGTGTCCTGGAATGGTCGTTCGAGCTGGTGACTGACCTGGTGAGCCAGGCGTATC TGCCTCTCTCCTCGACAGGCTTAATGGGCTGTCACCACCCATCTGGGCCGCAAAGAGAAT CAAGTCTTCACCGCATATCGTTCTGATTGTTGCATTCACCGCTTCACGGGAGTTCAATCA AGTCTTTCGTGAATAATAATCTAAGAATATGCTTCTTTCTGTCCAGCAGCGGCCTGAAAT TCGGTGACGACGGCGACCGACGGACATATGTTCAAGCCGACCGTGCATGGCCGGCGGGTC CCGGCGCCGGACGCACGCAAAGTCGAGCAATTAACGGCCACAGCTTCATCTTACACTGAT GGCCGGGAGGCCATCCACGACGACATGCGGCAGCAACAGCAGACCTGACGATCAAGCAGC CATTGGGCGACTGTTTTGATATGCTCCGGGGACCACTGCACCCATGGCGATGCATCGGTC GAATAACAGCGACTCCTCCGGGTGATTTTCAGCTCCCAATGCAAGCTCGATCGTCCTGCG CTGTGAGGCCATGCATGATAGCGAAAATGGCTGTGGAGCAATAGGCGGCATGCTAGGCTT TACTGGCATGATTGTAGTACTGTATTCTCATCTATCCCAAGTTGGTTCCGCGCGAAGAAT GTCGTCGCCGCCCTTAATTGTGTGGAAGTGTGGTCATCGTTGTCTCTTATTCCATATATG TTCATGGGTGGCACTAGCTAGTAGTGATAACAGTAGCCAGTGTTGAACGATCACTGTATG GTACATTGGTACAGATAGCTTGGTCTGTCAGCTAGGTGTTTTAATTGGTGCTTGGCGGTG GTGGAGAGGAAAAAAAAATCTTATGAGACCAGGTCCTATTTAGACTCTCAGGATATGTTT GTTCGAAAAAAATATGTAGTATAAATCACATATGTAATCCAGTGATCGATCTACCTCCAA TATGTTTATTCGTGAAATAAAGTTTTC



consensusID : consensus_2364#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1694
fasta sequence
                              [TGAGTCTCTCTCTACTCTCTCTCCTGCCGCCTCGCCAAAACGGAAACGAGAGGGCTGAGGGCTCCATGGAGATCGCGGTTTCGATGTCGGCGAGGCGCCGTGAACTCGCAGCCGGCGGTGGCAGGCCAGCCGTTGGGCGTGAAGGAACAGTAGCGGGCTAATATCCGGCCACAAGACGGCGACCGCCGCCGGGGGAGTGCCGCTTGGTGGCGGTGCGCGCCACCCGTTCGGCGGAATGCCCAGCGGGACTTCGCCACGGACGGGCGGCTCGCCGCACGCCGCTTCAGTCGATCGCGAGCACGATCCACACCTCGAGGATTTGTAAGTGACCCAATCTGTACGGGATTCCAACTAATTCAGAATTCAAGTCCGACGGGGGCGGAGTGCACGGGGACCTCACCATCACTGCAGCGAGGATCCCTCTTGTTGCGTCTGCTATCGATTCTTCGATTTATGAGGTGTTATGTGCGCAAGTACATGCAACTATGGACAAAATTGGAACCGAGCTACGATTACACATGAGACGGACGACAACCACTCTTGCACTGCGTAAGGAGGTTGAAGTTGATGGACCGTGGACCGCTGTTGATATTGTTAGCGACATCAGGCATGTCGACCACACATCTGTTGGTCATGCTGCTGCTGCTGTTGCACTTCTGTGGTTGGCCAAACTCTATGTTTGCAGTCATTCTATCCATGTTTGGGAGTGTGAAGGATGATGCATTGAAAACCATGGATGCAATGTCAATCCCAGCTGTAATATCAAGTGGGATTGCTGAGAGGATACCCATGGTCTGATGCTCTGCAACCGGTGAGGGTAGAGGTACAGATGCATCTGGCCTGCTGTTGCTGTCAATCATGCTGAGTGGGTTGTGGCATGAAGGAACTGTTGAAGGTAAGTAGCTACTTCCGGTGAACTGGATGGTGGAGGAGATGGCATCGGTCATTACTGATGATGTGTTATCTGAGGTATGCTGACTTCTCTGTGTGGTCTGCGAGACAGGGGCAGTGTAGGCTTCATTTGTGCTGGACAAGGGAGGAGATACCCATGAGTGTGAGAGCGCTCTTTGTGCCGTGGAATTGGTTTTCTTGAAAATCCTGCAGATTGCCCAGGAATCCTGCTCATGATAAGAAAAAAGAAGAATAAGATTAGGGCAGTGTTTTCAGGTAAAAAGTGCATTCAACTTATCTTCACAAGGAAATGGTATATGAAATTGTTGGTGTCATACTGAATTAGCTCGGAAAGCACTACATATGCTAGGCCTTTTGCAGTTTATATTGCAAGTTTTCCCATTGTAATTATGGGCAGACATGTATTGCTCAGATCATCTACCTTAGTGCCAGTTTTGGTAGCTATGCCTAAGCTACTTTTGTAGCATATGTGTTAAGGTTTGAAGTTTTTGTTTTCAAATGTTGCAGCATGCCAGTTGCTTACATTTGGTGGAATGATCTTCTCGAGTGGCTTCTTCTGTGGCAATGAAGGGTCAGTGAGCGATGGCAGCCGGAACTCGTGCATCATCCAGTCAGTTTTGACGCCTTTAGCTGCTCTGCCCTTGTAGAAGACAAGGGACTTCTTCAAGCCTATGCACTTTGATCCATCGGAGGAGTAGATTGGCCTATCGGTTCCAGTGGCCTTCCAGAAACCTGCTCCAGTCACCCTGTTTGGCCTTGTGCTGTTCCGGTACTTCCTATCC]

[+] EMBL AK102109             [TGAGTCTCTCTCTACTCTCTCTCCTGCCGCCTCGCCAAAACGGAAACGAGAGGGCTGAGGGCTCCATGGAGATCGCGGTTTCGATGTCGGCGAGGCGCCGTGAACTCGCAGCCGGCGGTGGCAGGCCAGCCGTTGGGCGTGAAGGAACAGTAGCGGGCTAATATCCGGCCACAAGACGGCGACCGCCGCCGGGGGAGTGCCGCTTGGTGGCGGTGCGCGCCACCCGTTCGGCGGAATGCCCAGCGGGACTTCGCCACGGACGGGCGGCTCGCCGCACGCCGCTTCAGTCGATCGCGAGCACGATCCACACCTCGAGGATTTGTAAGTGACCCAATCTGTACGGGATTCCAACTAATTCAGAATTCAAGTCCGACGGGGGCGGAGTGCACGGGGACCTCACCATCACTGCAGCGAGGATCCCTCTTGTTGCGTCTGCTATCGATTCTTCGATTTATGAGGTGTTATGTGCGCAAGTACATGCAACTATGGACAAAATTGGAACCGAGCTACGATTACACATGAGACGGACGACAACCACTCTTGCACTGCGTAAGGAGGTTGAAGTTGATGGACCGTGGACCGCTGTTGATATTGTTAGCGACATCAGGCATGTCGACCACACATCTGTTGGTCATGCTGCTGCTGCTGTTGCACTTCTGTGGTTGGCCAAACTCTATGTTTGCAGTCATTCTATCCATGTTTGGGAGTGTGAAGGATGATGCATTGAAAACCATGGATGCAATGTCAATCCCAGCTGTAATATCAAGTGGGATTGCTGAGAGGATACCCATGGTCTGATGCTCTGCAACCGGTGAGGGTAGAGGTACAGATGCATCTGGCCTGCTGTTGCTGTCAATCATGCTGAGTGGGTTGTGGCATGAAGGAACTGTTGAAGGTAAGTAGCTACTTCCGGTGAACTGGATGGTGGAGGAGATGGCATCGGTCATTACTGATGATGTGTTATCTGAGGTATGCTGACTTCTCTGTGTGGTCTGCGAGACAGGGGCAGTGTAGGCTTCATTTGTGCTGGACAAGGGAGGAGATACCCATGAGTGTGAGAGCGCTCTTTGTGCCGTGGAATTGGTTTTCTTGAAAATCCTGCAGATTGCCCAGGAATCCTGCTCATGATAAGAAAAAAGAAGAATAAGATTAGGGCAGTGTTTTCAGGTAAAAAGTGCATTCAACTTATCTTCACAAGGAAATGGTATATGAAATTGTTGGTGTCATACTGAATTAGCTCGGAAAGCACTACATATGCTAGGCCTTTTGCAGTTTATATTGCAAGTTTTCCCATTGTAATTATGGGCAGACATGTATTGCTCAGATCATCTACCTTAGTGCCAGTTTTGGTAGCTATGCCTAAGCTACTTTTGTAGCATATGTGTTAAGGTTTGAAGTTTTTGTTTTCAAATGTTGCAGCATGCCAGTTGCTTACATTTGGTGGAATGATCTTCTCGAGTGGCTTCTTCTGTGGCAATGAAGGGTCAGTGAGCGATGGCAGCCGGAACTCGTGCATCATCCAGTCAGTTTTGACGCCTTTAGCTGCTCTGCCCTTGTAGAAGACAAGGGACTTCTTCAAGCCTATGCACTTTGATCCATCGGAGGAGTAGATTGGCCTATCGGTTCCAGTGGCCTTCCAGAAACCTGCTCCAGTCACCCTGTTTGGCCTTGTGCTGTTCCGGTACTTCCTATCC]


>consensus_2364#1 TGAGTCTCTCTCTACTCTCTCTCCTGCCGCCTCGCCAAAACGGAAACGAGAGGGCTGAGG GCTCCATGGAGATCGCGGTTTCGATGTCGGCGAGGCGCCGTGAACTCGCAGCCGGCGGTG GCAGGCCAGCCGTTGGGCGTGAAGGAACAGTAGCGGGCTAATATCCGGCCACAAGACGGC GACCGCCGCCGGGGGAGTGCCGCTTGGTGGCGGTGCGCGCCACCCGTTCGGCGGAATGCC CAGCGGGACTTCGCCACGGACGGGCGGCTCGCCGCACGCCGCTTCAGTCGATCGCGAGCA CGATCCACACCTCGAGGATTTGTAAGTGACCCAATCTGTACGGGATTCCAACTAATTCAG AATTCAAGTCCGACGGGGGCGGAGTGCACGGGGACCTCACCATCACTGCAGCGAGGATCC CTCTTGTTGCGTCTGCTATCGATTCTTCGATTTATGAGGTGTTATGTGCGCAAGTACATG CAACTATGGACAAAATTGGAACCGAGCTACGATTACACATGAGACGGACGACAACCACTC TTGCACTGCGTAAGGAGGTTGAAGTTGATGGACCGTGGACCGCTGTTGATATTGTTAGCG ACATCAGGCATGTCGACCACACATCTGTTGGTCATGCTGCTGCTGCTGTTGCACTTCTGT GGTTGGCCAAACTCTATGTTTGCAGTCATTCTATCCATGTTTGGGAGTGTGAAGGATGAT GCATTGAAAACCATGGATGCAATGTCAATCCCAGCTGTAATATCAAGTGGGATTGCTGAG AGGATACCCATGGTCTGATGCTCTGCAACCGGTGAGGGTAGAGGTACAGATGCATCTGGC CTGCTGTTGCTGTCAATCATGCTGAGTGGGTTGTGGCATGAAGGAACTGTTGAAGGTAAG TAGCTACTTCCGGTGAACTGGATGGTGGAGGAGATGGCATCGGTCATTACTGATGATGTG TTATCTGAGGTATGCTGACTTCTCTGTGTGGTCTGCGAGACAGGGGCAGTGTAGGCTTCA TTTGTGCTGGACAAGGGAGGAGATACCCATGAGTGTGAGAGCGCTCTTTGTGCCGTGGAA TTGGTTTTCTTGAAAATCCTGCAGATTGCCCAGGAATCCTGCTCATGATAAGAAAAAAGA AGAATAAGATTAGGGCAGTGTTTTCAGGTAAAAAGTGCATTCAACTTATCTTCACAAGGA AATGGTATATGAAATTGTTGGTGTCATACTGAATTAGCTCGGAAAGCACTACATATGCTA GGCCTTTTGCAGTTTATATTGCAAGTTTTCCCATTGTAATTATGGGCAGACATGTATTGC TCAGATCATCTACCTTAGTGCCAGTTTTGGTAGCTATGCCTAAGCTACTTTTGTAGCATA TGTGTTAAGGTTTGAAGTTTTTGTTTTCAAATGTTGCAGCATGCCAGTTGCTTACATTTG GTGGAATGATCTTCTCGAGTGGCTTCTTCTGTGGCAATGAAGGGTCAGTGAGCGATGGCA GCCGGAACTCGTGCATCATCCAGTCAGTTTTGACGCCTTTAGCTGCTCTGCCCTTGTAGA AGACAAGGGACTTCTTCAAGCCTATGCACTTTGATCCATCGGAGGAGTAGATTGGCCTAT CGGTTCCAGTGGCCTTCCAGAAACCTGCTCCAGTCACCCTGTTTGGCCTTGTGCTGTTCC GGTACTTCCTATCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2364#0      GACGAAACGTCAGTCCTGATGAGTCTCTCTCTACTCTCTCTCCTGCCGCCTCGCCAAAAC 60
consensus_2364#1      -------------------TGAGTCTCTCTCTACTCTCTCTCCTGCCGCCTCGCCAAAAC 41
                                         *****************************************

consensus_2364#0      GGAAACGAGAGGGCTGAGGGCTCCATGGAGATCGCGGTTTCGATGTCGGCGAGGCGCCGT 120
consensus_2364#1      GGAAACGAGAGGGCTGAGGGCTCCATGGAGATCGCGGTTTCGATGTCGGCGAGGCGCCGT 101
                      ************************************************************

consensus_2364#0      GAACTCGCAGCCGGCGGTGGCAGGCCAGCCGTTGGGCGTGAAGGAACAGTAGCGGGCTAA 180
consensus_2364#1      GAACTCGCAGCCGGCGGTGGCAGGCCAGCCGTTGGGCGTGAAGGAACAGTAGCGGGCTAA 161
                      ************************************************************

consensus_2364#0      TATCCGGCCACAAGACGGCGACCGCCGCCGGGGGAGTGCCGCTTGGTGGCGGTGCGCGCC 240
consensus_2364#1      TATCCGGCCACAAGACGGCGACCGCCGCCGGGGGAGTGCCGCTTGGTGGCGGTGCGCGCC 221
                      ************************************************************

consensus_2364#0      ACCCGTTCGGCGGAATGCCCAGCGGGACTTCGCCACGGACGGGCGGCTCGCCGCACGCCG 300
consensus_2364#1      ACCCGTTCGGCGGAATGCCCAGCGGGACTTCGCCACGGACGGGCGGCTCGCCGCACGCCG 281
                      ************************************************************

consensus_2364#0      CTTCAGTCGATCGCGAGCACGATCCACACCTCGAGGATTTGTAAGTGACCCAATCTGTAC 360
consensus_2364#1      CTTCAGTCGATCGCGAGCACGATCCACACCTCGAGGATTTGTAAGTGACCCAATCTGTAC 341
                      ************************************************************

consensus_2364#0      GGGATTCCAACTAATTCAGAATTCAAGTCCGACGGGGGCGGAGTGCACGGGGACCTCACC 420
consensus_2364#1      GGGATTCCAACTAATTCAGAATTCAAGTCCGACGGGGGCGGAGTGCACGGGGACCTCACC 401
                      ************************************************************

consensus_2364#0      ATCACTGCAGCGAGGATCCCTCTTGTTGCGTCTGCTATCGATTCTTCGATTTATGAGGTG 480
consensus_2364#1      ATCACTGCAGCGAGGATCCCTCTTGTTGCGTCTGCTATCGATTCTTCGATTTATGAGGTG 461
                      ************************************************************

consensus_2364#0      TTATGTGCGCAAGTACATGCAACTATGGACAAAATTGGAACAGAGCTACGATTACACATG 540
consensus_2364#1      TTATGTGCGCAAGTACATGCAACTATGGACAAAATTGGAACCGAGCTACGATTACACATG 521
                      ***************************************** ******************

consensus_2364#0      AGACGGACGACAACCACTCTTGCACTGCATAAGGAGCATGCCAGTTGCTTACATTTGGTG 600
consensus_2364#1      AGACGGACGACAACCACTCTTGCACTGCGTAAGGAGGTTGA-AGTTGATGGACCGTGGAC 580
                      **************************** *******  **  ***** *      ***  

consensus_2364#0      GAATGATCTTCTCG--AGTGGCTTCTTCTGTGGCAATGAAGGGTCAGTGAGCGATGGCAG 658
consensus_2364#1      CGCTGTTGATATTGTTAGCGACATCAGGCATGTCGACCACACATCTGTTGGTCATG-CTG 639
                         ** *  * * *  ** * * **     ** * *  *    ** **  *  *** * *

consensus_2364#0      CCGGAACTCGTGCATCATCCAGTCAGTTTTGACGCCTTTAGCTGCTCTGCCCTTGTAGAA 718
consensus_2364#1      CTGCTGCTGTTGCACTTCTGTGGTTGGCCAAAC-TCTATGTTTGCAGTCATTCTATCCAT 698
                      * *   **  ****       *   *     **  ** *   ***  *     * *  * 

consensus_2364#0      GACAAGGGACTTCTTCAAGCCTATGCACTTTGATCCATCGGAGGAGT---AGATTGGCCT 775
consensus_2364#1      GTTTGGGAG--TGTGAAGGATGATGCATTGAAAACCATGGATGCAATGTCAATCCCAGCT 756
                      *    **    * *  * *   ***** *   * **** *  * * *   *       **

consensus_2364#0      ATCGGTTCCAGTGGCCTTCCAGAAACC-TGCTCCAGTCACCCTGTTTGGC--CTTGTGCT 832
consensus_2364#1      GTAATATCAAGTGGGATTGCTGAGAGGATACCCATGGTCTGATGCTCTGCAACCGGTGAG 816
                       *    ** *****  ** * ** *   * * *  *      ** *  **  *  ***  

consensus_2364#0      GTTCCGAGAACGGAAAAAAGAATGAAAATGGAAGTAACAA--ATCTTACTTGGGAGATCC 890
consensus_2364#1      GGTAGAGGTACAGATGCATCTGGCCTGCTGTTGCTGTCAATCATGCTGAGTGGGTTGTGG 876
                      * *    * ** **   *          **    *  ***  **  *   ****   *  

consensus_2364#0      CATGGATCATAC-TTGTAGATGTCCAGCTGCCT--GATGAGCTCAATGG-GAAGAGACTT 946
consensus_2364#1      CATGAAGGAACTGTTGAAGGTAAGTAGCTACTTCCGGTGAACTGGATGGTGGAGGAGATG 936
                      **** *  *    *** ** *    **** * *  * *** **  **** * **    * 

consensus_2364#0      CTGCTGGATTTTCCTTCTAAGGTAGAATCTGACGAGCTCTTCATCCGTTGGATGAAACCT 1006
consensus_2364#1      GCATCGGTCATTACTGATGATGTGTTATCTGAGGTATGCTGACTTCTCTGTGTGGT-CTG 995
                           **   ** **  * * **   ****** *    **   * *  **  **   *  

consensus_2364#0      GAAGCCAGGGTCTCTTTGGTCTTTACTCCATGACGAGGATCTCGATGAGCTGTACAACTT 1066
consensus_2364#1      CGAGACAGGGGCAGTGTAGGCTTCATTTGTGCTGGACAAGGGAGGAGATACCCATGAGTG 1055
                        ** ***** *  * * * *** * *       **  *    *  **     *  * * 

consensus_2364#0      CAGCAGTAATTTTGGGATTA-GCAATCTCTCTTATTACACTAAGTTAACTGAACTGTACT 1125
consensus_2364#1      TGAGAGCGCTCTTTGTGCCGTGGAATTGGTTTTCTTGAA---AATC--CTGCAGATTGCC 1110
                          **   * ** *      * ***   * ** **  *   * *   *** *   * * 

consensus_2364#0      TATGCATCATTGCTTATATAGCTTAGCATCTAATCTAATAGAGTTCTCACATATGCCTCA 1185
consensus_2364#1      CAGGAATC-CTGCTCAT---GATAAGAAAAAAGAAGAATAAGATTAGGGCA-GTGT---- 1161
                       * * ***  **** **   * * ** *   *    ****   **    **  **     

consensus_2364#0      TTTCTTATAATTAGACCTTTGAGAGAATAATCTGACTCCTTAGATATTTGGATAATTATT 1245
consensus_2364#1      TTTCAGGTAAAAAGTGCATT-------CAACTTATCTTCACAAGGAAATGG--------- 1205
                      ****   ***  **  * **        **  *  ** *  *   *  ***         

consensus_2364#0      TTTTTGTAGTTGTTTCCTTGGGTTGTCCATAGTGAACTATGTGGAACAATTCCCAAGACA 1305
consensus_2364#1      TATATGAAATTGTT-------GGTGTC-ATACTGAATTAGCTCGGAAAGCACTACATATG 1257
                      * * ** * *****       * **** *** **** **  * * * *   *   * *  

consensus_2364#0      TCAGAGACTTCCAAATTCCAAGGACAATGTTTTGTGCCCATCTGTTCGTCGCTATTCTGA 1365
consensus_2364#1      CTAGGCCTTTT------------GCAGTTTATATTGCAAGTTTTCCCATTGTAATTATGG 1305
                        **    **              ** * * *  ***   * *   * * *  *** ** 

consensus_2364#0      GGGTCCTTATTTTG-TCAGCCCACCTGGTGTGTTCTTAGGCGCATCCCTTTCTTGGCTAT 1424
consensus_2364#1      GCAGACATGTATTGCTCAGATCATCTA------CCTTAG-----TGCCAGTTTTGGTAGC 1354
                      *    * * * *** ****  ** **        *****     * **  * ****    

consensus_2364#0      TAACCATTTAACCTGCTCAGTCAGTTCTAGCTTCAAGGAACGGCCTGCCCATTCGTGCAT 1484
consensus_2364#1      TA--TGCCTAAGCTACTTTTGTAGCATATGTGTTAAGGTTTGAAGTTTTTGTT--TTCAA 1410
                      **      *** ** **     **     *  * ****   *   *     **  * ** 

consensus_2364#0      ATGGTGTTGCATTGGGCCCATCAACAGAACTTCTACAGACATTGATGCGAAAATCCTGCA 1544
consensus_2364#1      ATGTTGCAGCAT---GCCAGTTG--------CTTACATTTGGTGGAATGATCTTCTCGAG 1459
                      *** **  ****   ***  *            ****     **    **   **  *  

consensus_2364#0      TGGATCCAAGTGCAGCCCTCTCATTCGTCCCTTGCATCAGGAAATTAAATTAGGAAAATT 1604
consensus_2364#1      TGGCTTCTTCTGTGGCAATG--AAGGGTCAGTGAGCGATGGCAGCCGGAACTCGTGCATC 1517
                      *** * *   **  **  *   *   ***  *       ** *     *    *   ** 

consensus_2364#0      ATGCAACCCAAAATCCCATGGGCCCAAGTTTTCCTTCCCTGTCGTCCAAGCACCCAACAG 1664
consensus_2364#1      ATCCAGTC---AGTTTTGACGCCTTTAGCTGCTCTGCCC--TTGTAGAAG-ACAAGGGAC 1571
                      ** **  *   * *      * *   ** *   ** ***  * **  *** **     * 

consensus_2364#0      TTTGTCTGCCCTTTGCAGCATGGTGTCCTGGAATGGTCGTTCGAGCTGGTGACTGACCTG 1724
consensus_2364#1      TTCTTCAAGCCTATGCACTTTGATCCATCGGAGGAGTAGATTGGCCTATCGGTTCCAGTG 1631
                      **  **   *** ****   ** *     ***   ** * * *  **   *  *    **

consensus_2364#0      GTGAGCCAGGCGTATCTGCCTCTCTCCTCGACAGGCTTAATGGGCTGTCACCACCCATCT 1784
consensus_2364#1      GCCTTCCAGAAACCTGCTCCAGTCACCCTGTTTGGCCT--TGTGCTGTTCCGGTACTTCC 1689
                      *    ****     *   **  ** **  *   *** *  ** *****  *    * ** 

consensus_2364#0      GGGCCGCAAAGAGAATCAAGTCTTCACCGCATATCGTTCTGATTGTTGCATTCACCGCTT 1844
consensus_2364#1      TATCC------------------------------------------------------- 1694
                         **                                                       

consensus_2364#0      CACGGGAGTTCAATCAAGTCTTTCGTGAATAATAATCTAAGAATATGCTTCTTTCTGTCC 1904
consensus_2364#1      ------------------------------------------------------------
                                                                                  

consensus_2364#0      AGCAGCGGCCTGAAATTCGGTGACGACGGCGACCGACGGACATATGTTCAAGCCGACCGT 1964
consensus_2364#1      ------------------------------------------------------------
                                                                                  

consensus_2364#0      GCATGGCCGGCGGGTCCCGGCGCCGGACGCACGCAAAGTCGAGCAATTAACGGCCACAGC 2024
consensus_2364#1      ------------------------------------------------------------
                                                                                  

consensus_2364#0      TTCATCTTACACTGATGGCCGGGAGGCCATCCACGACGACATGCGGCAGCAACAGCAGAC 2084
consensus_2364#1      ------------------------------------------------------------
                                                                                  

consensus_2364#0      CTGACGATCAAGCAGCCATTGGGCGACTGTTTTGATATGCTCCGGGGACCACTGCACCCA 2144
consensus_2364#1      ------------------------------------------------------------
                                                                                  

consensus_2364#0      TGGCGATGCATCGGTCGAATAACAGCGACTCCTCCGGGTGATTTTCAGCTCCCAATGCAA 2204
consensus_2364#1      ------------------------------------------------------------
                                                                                  

consensus_2364#0      GCTCGATCGTCCTGCGCTGTGAGGCCATGCATGATAGCGAAAATGGCTGTGGAGCAATAG 2264
consensus_2364#1      ------------------------------------------------------------
                                                                                  

consensus_2364#0      GCGGCATGCTAGGCTTTACTGGCATGATTGTAGTACTGTATTCTCATCTATCCCAAGTTG 2324
consensus_2364#1      ------------------------------------------------------------
                                                                                  

consensus_2364#0      GTTCCGCGCGAAGAATGTCGTCGCCGCCCTTAATTGTGTGGAAGTGTGGTCATCGTTGTC 2384
consensus_2364#1      ------------------------------------------------------------
                                                                                  

consensus_2364#0      TCTTATTCCATATATGTTCATGGGTGGCACTAGCTAGTAGTGATAACAGTAGCCAGTGTT 2444
consensus_2364#1      ------------------------------------------------------------
                                                                                  

consensus_2364#0      GAACGATCACTGTATGGTACATTGGTACAGATAGCTTGGTCTGTCAGCTAGGTGTTTTAA 2504
consensus_2364#1      ------------------------------------------------------------
                                                                                  

consensus_2364#0      TTGGTGCTTGGCGGTGGTGGAGAGGAAAAAAAAATCTTATGAGACCAGGTCCTATTTAGA 2564
consensus_2364#1      ------------------------------------------------------------
                                                                                  

consensus_2364#0      CTCTCAGGATATGTTTGTTCGAAAAAAATATGTAGTATAAATCACATATGTAATCCAGTG 2624
consensus_2364#1      ------------------------------------------------------------
                                                                                  

consensus_2364#0      ATCGATCTACCTCCAATATGTTTATTCGTGAAATAAAGTTTTC 2667
consensus_2364#1      -------------------------------------------
                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)