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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 239 cluster # 239       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_239#0 length = 549 sequences # 2  

consensusID : consensus_239#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 549
fasta sequence
                              [TCAATCTCCCATTTCCCCTCTAATTCTACTTACTTAAGCTAGCTAATAATTAGCCCAAGAAAAATCCCCTCTCTCCTCCTCTCCTCTCACTTATCAAGAGAAAATCATTTTGGGATCTGAAAAACAAAGATAGATATGCAAGATAGCTAGCTAGCAAGTTATAGTCAAGTTTTGCTTGATTTCTACTCGATCGATTCGATCTCTAGCTAGGTGAAGGATCATGGCGTCGTCGTCGACGACGAACACGTCGGACGGCGCTGGGAAGCCGGCGTCGTCGTCGTCGTCGGCGTGCCCGAGAGGCCACTGGCGGCCC-GGGGAAGACGAGAAGCTCCGGCAGCTGGTGGAGAAGTACGGCCCTCAGAACTGGAACTCCATCGCCGAGAAGC-TGGAGGGCAGATCAGGGAAGAGCTGTCGTCTCCGGTGGTTCAACCAGGCTGGACCCGCGGATCAACAAGCGGCCCTTCACNGAGGAGGAAGAGGAGCCGCTGCTGGCGGCGCACCCGCACCACGGCAACAGTGGGGCCCTCATCGCCGGCACTTCCCGGCCCA]

[+] EMBL BE040762             [TCAATCTCCCATTTCCCCTCTAATTCTACTTACTTAAGCTAGCTAATAATTAGCCCAAGAAAAATCCCCTCTCTCCTCCTCTCCTCTCACTTATCAAGAGAAAATCATTTTGGGATCTGAAAAACAAAGATAGATATGCAAGATAGCTAGCTAGCAAGTTATAGTCAAGTTTTGCTTGATTTCTACTCGATCGATTCGATCTCTAGCTAGGTGAAGGATCATGGCGTCGTCGTCGACGACGAACACGTCGGACGGCGCTGGGAAGCCGGCGTCGTCGTCGTCGTCGGCGTGCCCGAGAGGCCACTGGCGGCCC GGGGAAGACGAGAAGCTCCGGCAGCTGGTGGAGAAGTACGGCCCTCAGAACTGGAACTCCATCGCCGAGAAGC TGGAGGGCAGATCAGGGAAGAGCTGTCGTCTCCGGTGGTTCAACCAGGCTGGACCCGCGGATCAACAAGCGGCCCTTCACNGAGGAGGAAGAGGAGCCGCTGCTGGCGGCGCACCCGCACCACGGCAACAGTGGGGCCCTCATCGCCGGCACTTCCCGGCCCA]
[+] EMBL AU032360             [  AATCTCCCATTTCCCCTCTAATTCTACTTACTTAAGCTAGCTAATAATTAGCCCAAGAAAAATCCCCTCTCTCCTCCTCTCCTCTCACTTATCAAGAGAAAATCATTTTGGGATCTGAAAAACAAAGATAGATATGCAAGATAGCTAGCTAGCAAGTTATAGTCAAGTTTTGCTTGATTTCTACTCGATCGATTCGATCTCTAGCTAGGTGAAGGATCATGGCGTCGTCGTCGACGAGAAACACGTCGGACGGCGCCGGGAAGCCGG GTCGTCGTCGTCGTCGGCGTGCCCGAGAGGCCACTGGCGGCCCGGGGGAAGACGAGAAGCTCCGGCAGCTGGTGGAGAAGTACGGGCCTTAGAACTGGAACTCCATCGCCGAGAAGCTTGGAGGGCAGATCAGGGAANAGCTGTCGTCTCCGGT                                                                                                                               ]


>consensus_239#0 TCAATCTCCCATTTCCCCTCTAATTCTACTTACTTAAGCTAGCTAATAATTAGCCCAAGA AAAATCCCCTCTCTCCTCCTCTCCTCTCACTTATCAAGAGAAAATCATTTTGGGATCTGA AAAACAAAGATAGATATGCAAGATAGCTAGCTAGCAAGTTATAGTCAAGTTTTGCTTGAT TTCTACTCGATCGATTCGATCTCTAGCTAGGTGAAGGATCATGGCGTCGTCGTCGACGAC GAACACGTCGGACGGCGCTGGGAAGCCGGCGTCGTCGTCGTCGTCGGCGTGCCCGAGAGG CCACTGGCGGCCCGGGGAAGACGAGAAGCTCCGGCAGCTGGTGGAGAAGTACGGCCCTCA GAACTGGAACTCCATCGCCGAGAAGCTGGAGGGCAGATCAGGGAAGAGCTGTCGTCTCCG GTGGTTCAACCAGGCTGGACCCGCGGATCAACAAGCGGCCCTTCACNGAGGAGGAAGAGG AGCCGCTGCTGGCGGCGCACCCGCACCACGGCAACAGTGGGGCCCTCATCGCCGGCACTT CCCGGCCCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)