cluster # 2425

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Oryza sativa
cluster # 2425 cluster # 2425 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2425#0 length = 712 sequences # 2

consensusID : consensus_2425#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 712
fasta sequence

                              [TTTTTTTTTTTGTTCAATGATCAGTTTTGTCAGCTATGATATGTCCATACTCCATACCAGCAGTGTATTACAAGTTTACAATTGGAATAAGCCATTCCACGAAAAAAACAACAGCAGTGCTATTTGTATTCAGTATTCCTGAAGAAATTGGGTGACACAAGGAAGTTGCTTCTAGATTAACATTGTGATTTGTTGCAGGGATTCACACTACACAAAAGCCTATTTCAAGATTAAAGGATCTCTGAATGTAAATCTAAGCATGCAAGTCAAGCATTGGAGCTTTTAGAAGTTGGAACCAAACTTTGTTTCTCCTCATCAAGCTCAATGCCCTCATTGTCATCTTTGGTTTGCTCAGATGATTCTGGTTCATGCTGCGGCGCGGTAATTCCTTTCTTTGTAACCGATTGCTGGTAGAGAACTCCACCAGCAATGGTGAAGAGCAAGCAGATCAAACCGAACGGGCTCGAGTGCTTGTCCCAGATCAATACATTGATCGCCACGGTGAGGAACTTGTTGACTACCCCGGTCACTGTAAACGCTGNTGCTGAGATAGCTTTCCTCGTCGCGAAACCGAAAAAGCTGATGAGCAATCCAAACACACATGACAATGCCACCGCCACAAATGCATCAACCTGAAACCACCTCTCACCCCTTGATTCTATCGCGGTGAAGAGCGATTTGTACTCCCCTTGTCTCGGCCTCTGGCTCAGTA]

[+] EMBL CA762386             [TTTTTTTTTTTGTTCAATGATCAGTTTTGTCAGCTATGATATGTCCATACTCCATACCAGCAGTGTATTACAAGTTTACAATTGGAATAAGCCATTCCACGAAAAAAACAACAGCAGTGCTATTTGTATTCAGTATTCCTGAAGAAATTGGGTGACACAAGGAAGTTGCTTCTAGATTAACATTGTGATTTGTTGCAGGGATTCACACTACACAAAAGCCTATTTCAAGATTAAAGGATCTCTGAATGTAAATCTAAGCATGCAAGTCAAGCATTGGAGCTTTTAGAAGTTGGAACCAAACTTTGTTTCTCCTCATCAAGCTCAATGCCCTCATTGTCATCTTTGGTTTGCTCAGATGATTCTGGTTCATGCTGCGGCGCGGTAATTCCTTTCTTTGTAACCGATTGCTGGTAGAGAACTCCACCAGCAATGGTGAAGAGCAAGCAGATCAAACCGAACGGGCTCGAGTGCTTGTCCCAGATCAATACATTGATCGCCACGGTGAGGAACTTGTTGACTACCCCGGTCACTGTAAACGCTGNTGCTGAGATAGCTTTCCTCGTCGCGAAACCGAAAAAGCTGATGAGCAATCCAAACACACATGACAATGCCACCGCCACAAATGCATCAACCTGAAACCACCTCTCACCCCTTGATTCTATCGCGGTGAAGAGCGATTTGTACTCCCCTTGTC                  ]
[+] EMBL CA762385             [                  ttttttTTTTGTCAGCTATGATATGTCCATACTCCATACCAGCAGTGTATTACAAGTTTACAATTGGAATAAGCCATTCCACGAAAAAAACAACAGCAGTGCTATTTGTATTCAGTATTCCTGAAGAAATTGGGTGACACAAGGAAGTTGCTTCTAGATTAACATTGTGATTTGTTGCAGGGATTCACACTACACAAAAGCCTATTTCAAGATTAAAGGATCTCTGAATGTAAATCTAAGCATGCAAGTCAAGCATTGGAGCTTTTAGAAGTTGGAACCAAACTTTGTTTCTCCTCATCAAGCTCAATGCCCTCATTGTCATCTTTGGTTTGCTCAGATGATTCTGGTTCATGCTGCGGCGCGGTAATTCCTTTCTTTGTAACCGATTGCTGGTAGAGAACTCCACCAGCAATGGTGAAGAGCAAGCAGATCAAACCGAACGGGCTCGAGTGCTTGTCCCAGATCAATACATTGATCGCCACGGTGAGGAACTTGTTGACTACCCCGGTCACTGTAAATGCTGTTGCTGAGATAGCTTTCCTCGTCGCGAAACCCAAGAAGCTGATGAGCAATCCAAACACACATGACAATGCCACCGGCACAAATGCATCAACCTGGAACCACCTCTCACGCCTTGATTCTATCGCGGGGAACAGCGATTTGTACTCCCCTTGGCTCGGCCTCTGGCTCAGTA]




>consensus_2425#0
TTTTTTTTTTTGTTCAATGATCAGTTTTGTCAGCTATGATATGTCCATACTCCATACCAG
CAGTGTATTACAAGTTTACAATTGGAATAAGCCATTCCACGAAAAAAACAACAGCAGTGC
TATTTGTATTCAGTATTCCTGAAGAAATTGGGTGACACAAGGAAGTTGCTTCTAGATTAA
CATTGTGATTTGTTGCAGGGATTCACACTACACAAAAGCCTATTTCAAGATTAAAGGATC
TCTGAATGTAAATCTAAGCATGCAAGTCAAGCATTGGAGCTTTTAGAAGTTGGAACCAAA
CTTTGTTTCTCCTCATCAAGCTCAATGCCCTCATTGTCATCTTTGGTTTGCTCAGATGAT
TCTGGTTCATGCTGCGGCGCGGTAATTCCTTTCTTTGTAACCGATTGCTGGTAGAGAACT
CCACCAGCAATGGTGAAGAGCAAGCAGATCAAACCGAACGGGCTCGAGTGCTTGTCCCAG
ATCAATACATTGATCGCCACGGTGAGGAACTTGTTGACTACCCCGGTCACTGTAAACGCT
GNTGCTGAGATAGCTTTCCTCGTCGCGAAACCGAAAAAGCTGATGAGCAATCCAAACACA
CATGACAATGCCACCGCCACAAATGCATCAACCTGAAACCACCTCTCACCCCTTGATTCT
ATCGCGGTGAAGAGCGATTTGTACTCCCCTTGTCTCGGCCTCTGGCTCAGTA

clustalw multiple alignements is not computed in this case