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Oryza sativa
cluster # 2461 cluster # 2461       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2461#0 length = 1248 sequences # 2  

consensusID : consensus_2461#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1248
fasta sequence
                              [TTGGTTTGGTTACCGGACTGATGGCGCCGCCGAGGTCGTGGTGCCACGCGCGGATCCGCGAGATGAGGGCCTCCGAGCCGCTGACGCAGCCGGCGATGACGTCGTGGTGGCCGGCGATGTACTTGGTGGCGGAGTGGAGGACCACGTCGGCGCCGAGGGCGAGCGGCTTCTGGTTGATGGGCGATGCCAGCGTGCTGTCGATGCACACCAGCGCGCCTCTCCGGTGGCACAGCTCCGCCACGCGTGTCACGTCGACGACCTTCAGCGCCTCCATGTCGTCGTCAAGATCGACGAACGTCGACTGCAAATACAAGGGACGAACGCCATTGTTAAGAGACAGATTGCAAGCAATGCCATGCTCTGATGAATGAAGCTGCCATTAATGGTGTTTACATACCGTGATGCCCATGTTGGAGAGCTTGTCGCGGATGAATGCGCGGGCCTCGCTGTAGCAGTCGGCGGTGGCGACGACGTGGCCGCCGGGAGGGACGAGGGCGAGCAGCGTGGCGACGATGGCGTTCATACCGGAGGAGGTCACCAGCGTCGCCTCCGCCCTCTCCAGCGCGCTGATCTTCTCCTCCAGCACCTTCACCGTCGGGTTGCCGTACCGCCCGTACTCGAAGCTCCGCCGCCGGCCTTCCCGGAACGCGATGAGGTCCGCCGAGTCCCTGAACCAGTGCGTCGTGCCGCTCACGATCGGCGTCGCGATCGAGTCCGTCTCAGCGGCGCCGCTCCCGAGCTTCTCCCCGGCGTGCACCGCCAGCGTCTCGTCCGACGCGCGTCGGCCCGCCGCCGCCGCCGGAGCGTCATCCACGGCGCCGTCGACGTAGCGGTCGTCCATGTCCGGCACCACCGGATACTCCGGCGACGAGGGACAACCCGCGAGGGAACCGAACATGTCGGCGGCTGCATCAACGCCGGCGAGAAGAATCTTCTCGTGGCTCAGCGCCACGGCGGCGGCAGAGCGCTCCGGCTTGGTCGGAGAACGGCGAGGACGGTGCACTCGCCGCCGCCGCTGCGCCGAAACCTTCGTCACGAGGGACGATGACTTCGCCATTAGCACAAGTACGCTACTAACCAAAGGGATTAAGACAAGTGATTAGTGTTTTTCAAGACCAAATGGTGGAGATTAGCGTCGAACAAGTAGCTTAATCCCAAGTGATTAGCGGCGAGCTTAATTAGCTAGTCACCGAAACAAAACAACTAATCGCTTGCGTTCTCGCTAATGATCTGAGTGGCCATTGAACT]

[+] EMBL CB666838             [TTGGTTTGGTTACCGGACTGATGGCGCCGCCGAGGTCGTGGTGCCACGCGCGGATCCGCGAGATGAGGGCCTCCGAGCCGCTGACGCAGCCGGCGATGACGTCGTGGTGGCCGGCGATGTACTTGGTGGCGGAGTGGAGGACCACGTCGGCGCCGAGGGCGAGCGGCTTCTGGTTGATGGGCGATGCCAGCGTGCTGTCGATGCACACCAGCGCGCCTCTCCGGTGGCACAGCTCCGCCACGCGTGTCACGTCGACGACCTTCAGCGCCTCCATGTCGTCGTCAAGATCGACGAACGTCGACTGCAAATACAAGGGACGAACGCCATTGTTAAGAGACAGATTGCAAGCAATGCCATGCTCTGATGAATGAAGCTGCCATTAATGGTGTTTACATACCGTGATGCCCATGTTGGAGAGCTTGTCGCGGATGAATGCGCGGGCCTCGCTGTAGCAGTCGGCGGTGGCGACGACGTGGCCGCCGGGAGGGACGAGGGCGAGCAGCGTGGCGACGATGGCGTTCATACCGGAGGAGGTCACCAGCGTCGCCTCCGCCCTCTCCAGCGCGCTGATCTTCTCCTCCAGCACCTTCACCGTCGGGTTGCCGTACCGCCCGTACTCGAAGCTCCGCCGCCGGCCTTCCCGGAACGCGATGAGGTCCGCCGAGTCCCTGAACCAGTGCGTCGTGCCGCTCACGATCGGCGTCGCGATCGAGTCCGTCTCAGCGGCGCCGCTCCCGAGCTTCTCCCCGGCGTGCACCGCCAGCGTCTCGTCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB666839             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCAGCGCGCTGATCTTCTCCTCCAGCACCTTCACCGTCGGGTTGCCGTACCGCCCGTACTNGAAGCTCCGCCGCCGGCCTTCCCGGAACGCGATGAGGTCCGCCGAGTCCCTGAACCAGTGCGTCGTGCCGCTCACGATCGGCGTCGCGATCGAGTCCGTCTCAGCGGCGCCGCTCCCGAGCTTCTCCCCGGCGTGCACCGCCAGCGTCTCGTCCGACGCGCGTCGGCCCGCCGCCGCCGCCGGAGCGTCATCCACGGCGCCGTCGACGTAGCGGTCGTCCATGTCCGGCACCACCGGATACTCCGGCGACGAGGGACAACCCGCGAGGGAACCGAACATGTCGGCGGCTGCATCAACGCCGGCGAGAAGAATCTTCTCGTGGCTCAGCGCCACGGCGGCGGCAGAGCGCTCCGGCTTGGTCGGAGAACGGCGAGGACGGTGCACTCGCCGCCGCCGCTGCGCCGAAACCTTCGTCACGAGGGACGATGACTTCGCCATTAGCACAAGTACGCTACTAACCAAAGGGATTAAGACAAGTGATTAGTGTTTTTCAAGACCAAATGGTGGAGATTAGCGTCGAACAAGTAGCTTAATCCCAAGTGATTAGCGGCGAGCTTAATTAGCTAGTCACCGAAACAAAACAACTAATCGCTTGCGTTCTCGCTAATGATCTGAGTGGCCATTGAACT]


>consensus_2461#0 TTGGTTTGGTTACCGGACTGATGGCGCCGCCGAGGTCGTGGTGCCACGCGCGGATCCGCG AGATGAGGGCCTCCGAGCCGCTGACGCAGCCGGCGATGACGTCGTGGTGGCCGGCGATGT ACTTGGTGGCGGAGTGGAGGACCACGTCGGCGCCGAGGGCGAGCGGCTTCTGGTTGATGG GCGATGCCAGCGTGCTGTCGATGCACACCAGCGCGCCTCTCCGGTGGCACAGCTCCGCCA CGCGTGTCACGTCGACGACCTTCAGCGCCTCCATGTCGTCGTCAAGATCGACGAACGTCG ACTGCAAATACAAGGGACGAACGCCATTGTTAAGAGACAGATTGCAAGCAATGCCATGCT CTGATGAATGAAGCTGCCATTAATGGTGTTTACATACCGTGATGCCCATGTTGGAGAGCT TGTCGCGGATGAATGCGCGGGCCTCGCTGTAGCAGTCGGCGGTGGCGACGACGTGGCCGC CGGGAGGGACGAGGGCGAGCAGCGTGGCGACGATGGCGTTCATACCGGAGGAGGTCACCA GCGTCGCCTCCGCCCTCTCCAGCGCGCTGATCTTCTCCTCCAGCACCTTCACCGTCGGGT TGCCGTACCGCCCGTACTCGAAGCTCCGCCGCCGGCCTTCCCGGAACGCGATGAGGTCCG CCGAGTCCCTGAACCAGTGCGTCGTGCCGCTCACGATCGGCGTCGCGATCGAGTCCGTCT CAGCGGCGCCGCTCCCGAGCTTCTCCCCGGCGTGCACCGCCAGCGTCTCGTCCGACGCGC GTCGGCCCGCCGCCGCCGCCGGAGCGTCATCCACGGCGCCGTCGACGTAGCGGTCGTCCA TGTCCGGCACCACCGGATACTCCGGCGACGAGGGACAACCCGCGAGGGAACCGAACATGT CGGCGGCTGCATCAACGCCGGCGAGAAGAATCTTCTCGTGGCTCAGCGCCACGGCGGCGG CAGAGCGCTCCGGCTTGGTCGGAGAACGGCGAGGACGGTGCACTCGCCGCCGCCGCTGCG CCGAAACCTTCGTCACGAGGGACGATGACTTCGCCATTAGCACAAGTACGCTACTAACCA AAGGGATTAAGACAAGTGATTAGTGTTTTTCAAGACCAAATGGTGGAGATTAGCGTCGAA CAAGTAGCTTAATCCCAAGTGATTAGCGGCGAGCTTAATTAGCTAGTCACCGAAACAAAA CAACTAATCGCTTGCGTTCTCGCTAATGATCTGAGTGGCCATTGAACT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)