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Oryza sativa
cluster # 2511 cluster # 2511       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2511#0 length = 2105 sequences # 2  

consensusID : consensus_2511#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2105
fasta sequence
                              [GAGGCGACCGCCGCCGCACCTCTCCTCCTCTTCCACGACGAGGCGCCGGTCTCGCCGGCGGAGCCCAGCATCGCCGGCAGATCCACGTCGAGCATCGCGGCAGGAGCAGGACAGGGAGAGGCCGAGGACACAGCGAAAGGGGATCGATCGATCGATCGATCTAGGGTTTTTTGAGCTCCGCCACCCGCCCCCTCCTTCCCGATGGAGACCCCCTCCGCTCCCGCTCCCGGGGATGGAAACTCGGCTCCCGCATCATCTCGGGTGACGTTTGAGGATATGCTTCGCAGCTGCGATCAGAGTTATTATCAAATGCTCGGGTTCCCTGACGCTGCTTCCTACTTCGAGGCAAAGGAGCGGAATTTGTTGGCTCAGTACTCGCGTCAGGTATTCCCTCTGCTATGGCCTATACTGGAGAAGGATAGCCTCACGCGCTTCAATCGACTTTGCCAAGGGTGGTCGCGCTTGATGGGCCTTCGTGGTTTCATTTACCCGGAGATTCTCAGCTCCATTGTCGCCAACAACGCTTTGCGCTGTGCCAGAGTGGCCCTGCAAGGCAGCTCTCCGTTGCGCGGACGTCGTGCCGATCCCAACGGCCTCCATCCTTATGGCTACACGGCTCTCCACCTGGCCGCTGAGACGTTCAGCGTCGAAATGGTCAAGCTCCTCCTCCGCCACGGTGCGTCAGCAAACCACCGCACTGAGGGCGACTACGTCATTGAGGGCCTCCTGCCTCTTCACGTCGCTGTTGAGAATGCCAGCATGCACAAATACCTGGAGGACAATTGGGCTGATGGCCACTCTCCTAACAACCTCATATCTCTCCTCTGTCTGCCAGAGATGAAGATGTATTTGGACACAACTAGATTAATTGCCCAACATACGCATAACATTGTCGATGAGTTGTGGGATTACATCGATAAGAAGAAGTTTGTCCAGTTAGCAATTTTGCTGCTGGCTTCTCAGAAGCAGCTCCATGGCCCCATAAATAGGAGCCGTGGCAAGGCTAATCTGAATGGGTTTGAATCTATTAGACGGCGCACTTATGAAGCTATCAGTGGCCTACATCTCCAGATGATAGCTATGGTGAATGAGGGGAAAAATGGCAGTGCGCTTAAGAAGCTGAAAGAGAAGAAGGAAGCCCTTCTTACAGCAGACGCACTAGTTGGTATTATAGACAAAGCTGGTCAAGATCTTGAGGATTATATTCAGACTAACTCAGAGGTCATCATGGTCGTGCCACGCGCGACCTACGTGGCTAGTGTTATTTGAAGTTATGAACTCAGTACCATGGCAAACAATGTTCTTAAGGTGGCGGCGCCTAGGCAACAATGCACTCCCAGCGCGATGTAGAGCTGCAGGAGATTCAGAAAGGTAAACCATGAGGGGGTCCTTGAACACGTTTCATCAATTCTAAACAGCAAGGGCATTGTTCCTTCTGGGAAAGGGATAGACACTGCAGACCTTAAATGCTACCGATATCCTGGGCAAACATCAATTAATATGTCACATTCACGAGCTGACAAGTCATATACCCTTAATGCTGAAGGTTGTAAAAGGATCCCTTCAAAAGCGACCATCTAAACTACTGGTCCTAAAAGAAGCGAGAGATAAGTTCTTTCCATACTGGAAATCGGTGCTGTCTGCCCGTTTGCCGGTGAAGATAGTTCCACCCTGTGAACCAAGCAGCAATGACATACAAAGGACTGAACCAAGGAAGGACATCCTAAGTACTGAAGCAAGCAGGAAGGACTTGCAACCGCCAAACAAATCAATCGCGAATCTTGTTTCGACGTCAAAGCCCCGATTGGCAAGCAATTATGAATGCAGGAGGCAGCTTTGTGCTCTTGCTGCGATGTCTCTTAAGGTGTTGAGGCGCACGTGAGTGAATCTATATGGCTTGGTAAAGACGAAAGTATCGGCGGCATGAGAGTAGCTGTGCTAGAATCTGTGTTCGTGTTCTTTTGACCTTCGTGGCCGTGTTATATTAACATGTATGTACTTGTCATGAAAATAAGATATATATATACCAGATGTAATGTATTTCAGGCTTGATGCAACCTGGTAACTTGGTAAGATTTCTAGCTGAACACATTGTGCTATCTTTG]

[+] EMBL AK099123             [GAGGCGACCGCCGCCGCACCTCTCCTCCTCTTCCACGACGAGGCGCCGGTCTCGCCGGCGGAGCCCAGCATCGCCGGCAGATCCACGTCGAGCATCGCGGCAGGAGCAGGACAGGGAGAGGCCGAGGACACAGCGAAAGGGGATCGATCGATCGATCGATCTAGGGTTTTTTGAGCTCCGCCACCCGCCCCCTCCTTCCCGATGGAGACCCCCTCCGCTCCCGCTCCCGGGGATGGAAACTCGGCTCCCGCATCATCTCGGGTGACGTTTGAGGATATGCTTCGCAGCTGCGATCAGAGTTATTATCAAATGCTCGGGTTCCCTGACGCTGCTTCCTACTTCGAGGCAAAGGAGCGGAATTTGTTGGCTCAGTACTCGCGTCAGGTATTCCCTCTGCTATGGCCTATACTGGAGAAGGATAGCCTCACGCGCTTCAATCGACTTTGCCAAGGGTGGTCGCGCTTGATGGGCCTTCGTGGTTTCATTTACCCGGAGATTCTCAGCTCCATTGTCGCCAACAACGCTTTGCGCTGTGCCAGAGTGGCCCTGCAAGGCAGCTCTCCGTTGCGCGGACGTCGTGCCGATCCCAACGGCCTCCATCCTTATGGCTACACGGCTCTCCACCTGGCCGCTGAGACGTTCAGCGTCGAAATGGTCAAGCTCCTCCTCCGCCACGGTGCGTCAGCAAACCACCGCACTGAGGGCGACTACGTCATTGAGGGCCTCCTGCCTCTTCACGTCGCTGTTGAGAATGCCAGCATGCACAAATACCTGGAGGACAATTGGGCTGATGGCCACTCTCCTAACAACCTCATATCTCTCCTCTGTCTGCCAGAGATGAAGATGTATTTGGACACAACTAGATTAATTGCCCAACATACGCATAACATTGTCGATGAGTTGTGGGATTACATCGATAAGAAGAAGTTTGTCCAGTTAGCAATTTTGCTGCTGGCTTCTCAGAAGCAGCTCCATGGCCCCATAAATAGGAGCCGTGGCAAGGCTAATCTGAATGGGTTTGAATCTATTAGACGGCGCACTTATGAAGCTATCAGTGGCCTACATCTCCAGATGATAGCTATGGTGAATGAGGGGAAAAATGGCAGTGCGCTTAAGAAGCTGAAAGAGAAGAAGGAAGCCCTTCTTACAGCAGACGCACTAGTTGGTATTATAGACAAAGCTGGTCAAGATCTTGAGGATTATATTCAGACTAACTCAGAGGTCATCATGGTCGTGCCACGCGCGACCTACGTGGCTAGTGTTATTTGAAGTTATGAACTCAGTACCATGGCAAACAATGTTCTTAAGGTGGCGGCGCCTAGGCAACAATGCACTCCCAGCGCGATGTAGAGCTGCAGGAGATTCAGAAAGGTAAACCATGAGGGGGTCCTTGAACACGTTTCATCAATTCTAAACAGCAAGGGCATTGTTCCTTCTGGGAAAGGGATAGACACTGCAGACCTTAAATGCTACCGATATCCTGGGCAAACATCAATTAATATGTCACATTCACGAGCTGACAAGTCATATACCCTTAATGCTGAAGGTTGTAAAAGGATCCCTTCAAAAGCGACCATCTAAACTACTGGTCCTAAAAGAAGCGAGAGATAAGTTCTTTCCATACTGGAAATCGGTGCTGTCTGCCCGTTTGCCGGTGAAGATAGTTCCACCCTGTGAACCAAGCAGCAATGACATACAAAGGACTGAACCAAGGAAGGACATCCTAAGTACTGAAGCAAGCAGGAAGGACTTGCAACCGCCAAACAAATCAATCGCGAATCTTGTTTCGACGTCAAAGCCCCGATTGGCAAGCAATTATGAATGCAGGAGGCAGCTTTGTGCTCTTGCTGCGATGTCTCTTAAGGTGTTGAGGCGCACGTGAGTGAATCTATATGGCTTGGTAAAGACGAAAGTATCGGCGGCATGAGAGTAGCTGTGCTAGAATCTGTGTTCGTGTTCTTTTGACCTTCGTGGCCGTGTTATATTAACATGTATGTACTTGTCATGAAAATAAGATATATATATACCAGATGTAATGTATTTCAGGCTTGATGCAACCTGGTAACTTGGTAAGATTTCTAGCTGAACACATTGTGCTATCTTTG]
[+] EMBL AK069850             [GAGGCGACCGCCGCCGCACCTCTCCTCCTCTTCCACGACGAGGCGCCGGTCTCGCCGGCGGAGCCCAGCATCGCCGGCAGATCCACGTCGAGCATCGCGGCAGGAGCAGGACAGGGAGAGGCCGAGGACACAGCGAAAGGGGATCGATCGATCGATCGATCTAGGGTTTTTTGAGCTCCGCCACCCGCCCCCTCCTTCCCGATGGAGACCCCCTCCGCTCCCGCTCCCGGGGATGGAAACTCGGCTCCCGCATCATCTCGGGTGACGTTTGAGGATATGCTTCGCAGCTGCGATCAGAGTTATTATCAAATGCTCGGGTTCCCTGACGCTGCTTCCTACTTCGAGGCAAAGGAGCGGAATTTGTTGGCTCAGTACTCGCGTCAGGTATTCCCTCTGCTATGGCCTATACTGGAGAAGGATAGCCTCACGCGCTTCAATCGACTTTGCCAAGGGTGGTCGCGCTTGATGGGCCTTCGTGGTTTCATTTACCCGGAGATTCTCAGCTCCATTGTCGCCAACAACGCTTTGCGCTGTGCCAGAGTGGCCCTGCAAGGCAGCTCTCCGTTGCGCGGACGTCGTGCCGATCCCAACGGCCTCCATCCTTATGGCTACACGGCTCTCCACCTGGCCGCTGAGACGTTCAGCGTCGAAATGGTCAAGCTCCTCCTCCGCCACGGTGCGTCAGCAAACCACCGCACTGAGGGCGACTACGTCATTGAGGGCCTCCTGCCTCTTCACGTCGCTGTTGAGAATGCCAGCATGCACAAATACCTGGAGGACAATTGGGCTGATGGCCACTCTCCTAACAACCTCATATCTCTCCTCTGTCTGCCAGAGATGAAGATGTATTTGGACACAACTAGATTAATTGCCCAACATACGCATAACATTGTCGATGAGTTGTGGGATTACATCGATAAGAAGAAGTTTGTCCAGTTAGCAATTTTGCTGCTGGCTTCTCAGAAGCAGCTCCATGGCCCCATAAATAGGAGCCGTGGCAAGGCTAATCTGAATGGGTTTGAATCTATTAGACGGCGCACTTATGAAGCTATCAGTGGCCTACATCTCCAGATGATAGCTATGGTGAATGAGGGGAAAAATGGCAGTGCGCTTAAGAAGCTGAAAGAGAAGAAGGAAGCCCTTCTTACAGCAGACGCACTAGTTGGTATTATAGACAAAGCTGGTCAAGATCTTGAGGATTATATTCAGACTAACTCAGAGGTCATCATGGTCGTGCCACGCGCGACCTACGTGGCTAGTGTTATTTGAAGTTATGAACTCAGTACCATGGCAAACAATGTTCTTAAGGTGGCGGCGCCTAGGCAACAATGCACTCCCAGCGCGATGTAGAGCTGCAGGAGATTCAGAAAGGTAAACCATGAGGGGGTCCTTGAACACGTTTCATCAATTCTAAACAGCAAGGGCATTGTTCCTTCTGGGAAAGGGATAGACACTGCAGACCTTAAATGCTACCGATATCCTGGGCAAACATCAATTAATATGTCACATTCACGAGCTGACAAGTCATATACCCTTAATGCTGAAGGTTGTAAAAGGATCCCTTCAAAAGCGACCATCTAAACTACTGGTCCTAAAAGAAGCGAGAGATAAGTTCTTTCCATACTGGAAATCGGTGCTGTCTGCCCGTTTGCCGGTGAAGATAGTTCCACCCTGTGAACCAAGCAGCAATGACATACAAAGGACTGAACCAAGGAAGGACATCCTAAGTACTGAAGCAAGCAGGAAGGACTTGCAACCGCCAAACAAATCAATCGCGAATCTTGTTTCGACGTCAAAGCCCCGATTGGCAAGCAATTATGAATGCAGGAGGCAGCTTTGTGCTCTTGCTGCGATGTCTCTTAAGGTGTTGAGGCGCACGTGAGTGAATCTATATGGCTTGGTAAAGACGAAAGTATCGGCGGCATGAGAGTAGCTGTGCTAGAATCTGTGTTCGTGTTCTTTTGACCTTCGTGGCCGTGTTATATTAACATGTATGTACTTGTCATGAAAATAAGATATATATATACCAGATGTAATGTATTTCAGGCTTGATGCAACCTGGTAACTTGGTAAGATTTCTAGCTGAACACATTGTGCTATCTTTG]


>consensus_2511#0 GAGGCGACCGCCGCCGCACCTCTCCTCCTCTTCCACGACGAGGCGCCGGTCTCGCCGGCG GAGCCCAGCATCGCCGGCAGATCCACGTCGAGCATCGCGGCAGGAGCAGGACAGGGAGAG GCCGAGGACACAGCGAAAGGGGATCGATCGATCGATCGATCTAGGGTTTTTTGAGCTCCG CCACCCGCCCCCTCCTTCCCGATGGAGACCCCCTCCGCTCCCGCTCCCGGGGATGGAAAC TCGGCTCCCGCATCATCTCGGGTGACGTTTGAGGATATGCTTCGCAGCTGCGATCAGAGT TATTATCAAATGCTCGGGTTCCCTGACGCTGCTTCCTACTTCGAGGCAAAGGAGCGGAAT TTGTTGGCTCAGTACTCGCGTCAGGTATTCCCTCTGCTATGGCCTATACTGGAGAAGGAT AGCCTCACGCGCTTCAATCGACTTTGCCAAGGGTGGTCGCGCTTGATGGGCCTTCGTGGT TTCATTTACCCGGAGATTCTCAGCTCCATTGTCGCCAACAACGCTTTGCGCTGTGCCAGA GTGGCCCTGCAAGGCAGCTCTCCGTTGCGCGGACGTCGTGCCGATCCCAACGGCCTCCAT CCTTATGGCTACACGGCTCTCCACCTGGCCGCTGAGACGTTCAGCGTCGAAATGGTCAAG CTCCTCCTCCGCCACGGTGCGTCAGCAAACCACCGCACTGAGGGCGACTACGTCATTGAG GGCCTCCTGCCTCTTCACGTCGCTGTTGAGAATGCCAGCATGCACAAATACCTGGAGGAC AATTGGGCTGATGGCCACTCTCCTAACAACCTCATATCTCTCCTCTGTCTGCCAGAGATG AAGATGTATTTGGACACAACTAGATTAATTGCCCAACATACGCATAACATTGTCGATGAG TTGTGGGATTACATCGATAAGAAGAAGTTTGTCCAGTTAGCAATTTTGCTGCTGGCTTCT CAGAAGCAGCTCCATGGCCCCATAAATAGGAGCCGTGGCAAGGCTAATCTGAATGGGTTT GAATCTATTAGACGGCGCACTTATGAAGCTATCAGTGGCCTACATCTCCAGATGATAGCT ATGGTGAATGAGGGGAAAAATGGCAGTGCGCTTAAGAAGCTGAAAGAGAAGAAGGAAGCC CTTCTTACAGCAGACGCACTAGTTGGTATTATAGACAAAGCTGGTCAAGATCTTGAGGAT TATATTCAGACTAACTCAGAGGTCATCATGGTCGTGCCACGCGCGACCTACGTGGCTAGT GTTATTTGAAGTTATGAACTCAGTACCATGGCAAACAATGTTCTTAAGGTGGCGGCGCCT AGGCAACAATGCACTCCCAGCGCGATGTAGAGCTGCAGGAGATTCAGAAAGGTAAACCAT GAGGGGGTCCTTGAACACGTTTCATCAATTCTAAACAGCAAGGGCATTGTTCCTTCTGGG AAAGGGATAGACACTGCAGACCTTAAATGCTACCGATATCCTGGGCAAACATCAATTAAT ATGTCACATTCACGAGCTGACAAGTCATATACCCTTAATGCTGAAGGTTGTAAAAGGATC CCTTCAAAAGCGACCATCTAAACTACTGGTCCTAAAAGAAGCGAGAGATAAGTTCTTTCC ATACTGGAAATCGGTGCTGTCTGCCCGTTTGCCGGTGAAGATAGTTCCACCCTGTGAACC AAGCAGCAATGACATACAAAGGACTGAACCAAGGAAGGACATCCTAAGTACTGAAGCAAG CAGGAAGGACTTGCAACCGCCAAACAAATCAATCGCGAATCTTGTTTCGACGTCAAAGCC CCGATTGGCAAGCAATTATGAATGCAGGAGGCAGCTTTGTGCTCTTGCTGCGATGTCTCT TAAGGTGTTGAGGCGCACGTGAGTGAATCTATATGGCTTGGTAAAGACGAAAGTATCGGC GGCATGAGAGTAGCTGTGCTAGAATCTGTGTTCGTGTTCTTTTGACCTTCGTGGCCGTGT TATATTAACATGTATGTACTTGTCATGAAAATAAGATATATATATACCAGATGTAATGTA TTTCAGGCTTGATGCAACCTGGTAACTTGGTAAGATTTCTAGCTGAACACATTGTGCTAT CTTTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)