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Oryza sativa
cluster # 2528 cluster # 2528       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2528#0 length = 2401 sequences # 1  
consensus_2528#1 length = 2206 sequences # 1  

consensusID : consensus_2528#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2401
fasta sequence
                              [AACAATACTAGCCTAATGGAGAAGCTGGCAGTAACCACTGACATTATCTGAAGAAATTACTTGCCGGTTACAGCAATGAAGAGAAGCTGAACCCAGAGGAGTGGTACTGAGAACACAGGTGCCAATACAATCTTTCATCAGTTTGAAGCCAGCTGCTGCCGTTGCATCCTCTTCATCACCAAAAATGTAATCGAAGAACTCCTCGCATCCTCCTCCTCCGCCATTGCCGTCGGCGAGGAGACTCCTCTTCCTCTTCACCCTTCTCGGCGTCTTCTTCTCGACCGGCTCCACCTCTCCGAGGTCGCCGAACGCGGCCTCCTTCGCCAGCCATTGTTGGAGAAGCATCGCCCTTGCCTCCTTCATGGCGGGATCATCAGCGCATCCCCTGAAGTGTTCGTCCGCTCTTCGGCATACGGCGCGGCACCTCCGGACCCGCTCGGCCTTCTCCGCCGCGTTCCCGGCGATGGCGGCGCCGCCGGAGCACGCCGTGGCCTCGAACTCGGCGTAGCTCACCCACACGTTGAGGTGTTGTGTTTTGCCGAGAAGCCTCTCGTAGAGCTGCCTCGCTCTGTCGAGCTCGCCGGCGTCGATCTCGAACTGGATGTAGTCCGTCCACACTAGCTCCGGGGCGTCCAGCGCCGGCTGAGAGACGGCGAGGTCGTATACGGATCGGGCGCGGTCGGTCTCGCCCAGCTTCTTCTCCAACGCGGCGTAGCTTCTCCATACGTGGCTGCTGCTCGGAGCGTGCTCGATGAACTTCTGGGACAGAATCCGGCACCGGCCGACGTTGCCGAGCTGGAGCTCGATCTCGATGTACCTCCTGGATAGCTTCGGCCGGGGCGCGACGCCGATCGCGTTGCCGAGGAGCCGCCGCGCCGCGGCGAGGTTCTTGTCACGGATCTCGAGCTCCGCCGCCATGACGCAGATATTGGAGAAGGAGAACTTCTTGTGTGGGATCGTCCTGAGGCACTCCCGGTACACGCCGCGGGCGCGCGCCACGTCCTCCGCGTCGAGCTCCTCGAAGAGGGCGTAGTTGATCCAGAGGTAGATGTACCGCCGCCAATGCCGCTTCTCCGCCGCCGCCGCCGCCGGTGGAACGTTGGCGACGGCGCGCCTGTAGAGGTCCCTGATCCGGTTCGCGTCGCCGGTGTTGGCGCTCTCCTCCAGCCTGATGAGGTCGAACCACGCGTCGTAGCACAGCGGGTTCGTGGTCACCGCGCGCTCGTACTGGGACCTCCGCTTGGTGACGATGCTGTCCTCGACGCCATGGCGGTCGCCGAACCGCTTCTCGAGAGAGAGGAGCTTCTCGCGCAGCTCCTCGGCGCGGGGCTCGGGCGGCTCGCCACGGAGCGCGTGCTGGTATATTGCACGCGCTCGGTCCGGCTCCCCGCACCGCTCCTCGAAGTCGGCGAACGCGGCGAGCAGCACGGCGGTGTCGTCGTTGTCGCCGGCGGCGGCGAGCAGGCTCCCGGCGTGCTCGTACACGCGGGGCGCGCGGTCCAGGTTCTTCAGTTTCGTCTCGAACTCGGCGAAAAGGATGAACGCGTCGGCGCACGGGAGAGCAGCAACATGCCGCTCGTGCACGGCTCTGGCACGGTCCAGCTCGCCGTGGCGGAGCTCGAACGCGGCGTACGCGGCCCAGGCATCGGCGCCGGGGCGCCAAGACGTCCACCTATCGAACACTACGCGGGCGTTGTCTGTGGCGCCGAGGAGATCCTCCATGCGGAGGTACTCCGACCAGATGCGGTCAGCGCGCGGGAGGATCGCCACGGCGCGGTCAAGTACGTTGCGCGCGTGCCCGACGCGGCCGCCACGAGCCTCGAACTGCGCATACTTTATCCACACACCATGGTCGCGGTACGCCGGCGCGCCGCCGGCCAGCGCGCGCTCGTACACGGATCGCGCGCGGGCGGGGTCGCCGCCGCCGCCGCCGGGGGACTCCTCCCACCGCGCGTACCTCATCCACTCCGACGACGCGTCGCCGCATCCTCCGCGACCGCTGCCGGCTCGGCGGACGATGGCCTCGAACCGTGCGCGTCGCTCGAGCCGGTGCTCGGCGAGCTCGTCGGCATCGACGATCCTCCTCTTCTTGGACTCCGCCGGCAGGCAGACGGTCACCGATCCATCGCCGTGCAGTTCGCGGGCCTCACGGATGAGATGCTCGGCCGTGAGCTGCACGGGCGCCGGTGCTTTGTTCTTGACGCGGCGGGGGGTCGGCAGCATCGCCAATAACTGGAACTGGATACAGGTGGAGAAGTGCCGATGAGTTGTGGTGTCCTATTATTATAGGCCGCCGAGGAAGGCCAGGCCGGTACACAATGGAAATACGAATCGGGCCCGGTCCTTTGTTCCTTTGGATTTTTTTCGTTTTTAGATTTTTTTTTAATATTTACAGAAATAA]

[+] EMBL AK109143             [AACAATACTAGCCTAATGGAGAAGCTGGCAGTAACCACTGACATTATCTGAAGAAATTACTTGCCGGTTACAGCAATGAAGAGAAGCTGAACCCAGAGGAGTGGTACTGAGAACACAGGTGCCAATACAATCTTTCATCAGTTTGAAGCCAGCTGCTGCCGTTGCATCCTCTTCATCACCAAAAATGTAATCGAAGAACTCCTCGCATCCTCCTCCTCCGCCATTGCCGTCGGCGAGGAGACTCCTCTTCCTCTTCACCCTTCTCGGCGTCTTCTTCTCGACCGGCTCCACCTCTCCGAGGTCGCCGAACGCGGCCTCCTTCGCCAGCCATTGTTGGAGAAGCATCGCCCTTGCCTCCTTCATGGCGGGATCATCAGCGCATCCCCTGAAGTGTTCGTCCGCTCTTCGGCATACGGCGCGGCACCTCCGGACCCGCTCGGCCTTCTCCGCCGCGTTCCCGGCGATGGCGGCGCCGCCGGAGCACGCCGTGGCCTCGAACTCGGCGTAGCTCACCCACACGTTGAGGTGTTGTGTTTTGCCGAGAAGCCTCTCGTAGAGCTGCCTCGCTCTGTCGAGCTCGCCGGCGTCGATCTCGAACTGGATGTAGTCCGTCCACACTAGCTCCGGGGCGTCCAGCGCCGGCTGAGAGACGGCGAGGTCGTATACGGATCGGGCGCGGTCGGTCTCGCCCAGCTTCTTCTCCAACGCGGCGTAGCTTCTCCATACGTGGCTGCTGCTCGGAGCGTGCTCGATGAACTTCTGGGACAGAATCCGGCACCGGCCGACGTTGCCGAGCTGGAGCTCGATCTCGATGTACCTCCTGGATAGCTTCGGCCGGGGCGCGACGCCGATCGCGTTGCCGAGGAGCCGCCGCGCCGCGGCGAGGTTCTTGTCACGGATCTCGAGCTCCGCCGCCATGACGCAGATATTGGAGAAGGAGAACTTCTTGTGTGGGATCGTCCTGAGGCACTCCCGGTACACGCCGCGGGCGCGCGCCACGTCCTCCGCGTCGAGCTCCTCGAAGAGGGCGTAGTTGATCCAGAGGTAGATGTACCGCCGCCAATGCCGCTTCTCCGCCGCCGCCGCCGCCGGTGGAACGTTGGCGACGGCGCGCCTGTAGAGGTCCCTGATCCGGTTCGCGTCGCCGGTGTTGGCGCTCTCCTCCAGCCTGATGAGGTCGAACCACGCGTCGTAGCACAGCGGGTTCGTGGTCACCGCGCGCTCGTACTGGGACCTCCGCTTGGTGACGATGCTGTCCTCGACGCCATGGCGGTCGCCGAACCGCTTCTCGAGAGAGAGGAGCTTCTCGCGCAGCTCCTCGGCGCGGGGCTCGGGCGGCTCGCCACGGAGCGCGTGCTGGTATATTGCACGCGCTCGGTCCGGCTCCCCGCACCGCTCCTCGAAGTCGGCGAACGCGGCGAGCAGCACGGCGGTGTCGTCGTTGTCGCCGGCGGCGGCGAGCAGGCTCCCGGCGTGCTCGTACACGCGGGGCGCGCGGTCCAGGTTCTTCAGTTTCGTCTCGAACTCGGCGAAAAGGATGAACGCGTCGGCGCACGGGAGAGCAGCAACATGCCGCTCGTGCACGGCTCTGGCACGGTCCAGCTCGCCGTGGCGGAGCTCGAACGCGGCGTACGCGGCCCAGGCATCGGCGCCGGGGCGCCAAGACGTCCACCTATCGAACACTACGCGGGCGTTGTCTGTGGCGCCGAGGAGATCCTCCATGCGGAGGTACTCCGACCAGATGCGGTCAGCGCGCGGGAGGATCGCCACGGCGCGGTCAAGTACGTTGCGCGCGTGCCCGACGCGGCCGCCACGAGCCTCGAACTGCGCATACTTTATCCACACACCATGGTCGCGGTACGCCGGCGCGCCGCCGGCCAGCGCGCGCTCGTACACGGATCGCGCGCGGGCGGGGTCGCCGCCGCCGCCGCCGGGGGACTCCTCCCACCGCGCGTACCTCATCCACTCCGACGACGCGTCGCCGCATCCTCCGCGACCGCTGCCGGCTCGGCGGACGATGGCCTCGAACCGTGCGCGTCGCTCGAGCCGGTGCTCGGCGAGCTCGTCGGCATCGACGATCCTCCTCTTCTTGGACTCCGCCGGCAGGCAGACGGTCACCGATCCATCGCCGTGCAGTTCGCGGGCCTCACGGATGAGATGCTCGGCCGTGAGCTGCACGGGCGCCGGTGCTTTGTTCTTGACGCGGCGGGGGGTCGGCAGCATCGCCAATAACTGGAACTGGATACAGGTGGAGAAGTGCCGATGAGTTGTGGTGTCCTATTATTATAGGCCGCCGAGGAAGGCCAGGCCGGTACACAATGGAAATACGAATCGGGCCCGGTCCTTTGTTCCTTTGGATTTTTTTCGTTTTTAGATTTTTTTTTAATATTTACAGAAATAA]


>consensus_2528#0 AACAATACTAGCCTAATGGAGAAGCTGGCAGTAACCACTGACATTATCTGAAGAAATTAC TTGCCGGTTACAGCAATGAAGAGAAGCTGAACCCAGAGGAGTGGTACTGAGAACACAGGT GCCAATACAATCTTTCATCAGTTTGAAGCCAGCTGCTGCCGTTGCATCCTCTTCATCACC AAAAATGTAATCGAAGAACTCCTCGCATCCTCCTCCTCCGCCATTGCCGTCGGCGAGGAG ACTCCTCTTCCTCTTCACCCTTCTCGGCGTCTTCTTCTCGACCGGCTCCACCTCTCCGAG GTCGCCGAACGCGGCCTCCTTCGCCAGCCATTGTTGGAGAAGCATCGCCCTTGCCTCCTT CATGGCGGGATCATCAGCGCATCCCCTGAAGTGTTCGTCCGCTCTTCGGCATACGGCGCG GCACCTCCGGACCCGCTCGGCCTTCTCCGCCGCGTTCCCGGCGATGGCGGCGCCGCCGGA GCACGCCGTGGCCTCGAACTCGGCGTAGCTCACCCACACGTTGAGGTGTTGTGTTTTGCC GAGAAGCCTCTCGTAGAGCTGCCTCGCTCTGTCGAGCTCGCCGGCGTCGATCTCGAACTG GATGTAGTCCGTCCACACTAGCTCCGGGGCGTCCAGCGCCGGCTGAGAGACGGCGAGGTC GTATACGGATCGGGCGCGGTCGGTCTCGCCCAGCTTCTTCTCCAACGCGGCGTAGCTTCT CCATACGTGGCTGCTGCTCGGAGCGTGCTCGATGAACTTCTGGGACAGAATCCGGCACCG GCCGACGTTGCCGAGCTGGAGCTCGATCTCGATGTACCTCCTGGATAGCTTCGGCCGGGG CGCGACGCCGATCGCGTTGCCGAGGAGCCGCCGCGCCGCGGCGAGGTTCTTGTCACGGAT CTCGAGCTCCGCCGCCATGACGCAGATATTGGAGAAGGAGAACTTCTTGTGTGGGATCGT CCTGAGGCACTCCCGGTACACGCCGCGGGCGCGCGCCACGTCCTCCGCGTCGAGCTCCTC GAAGAGGGCGTAGTTGATCCAGAGGTAGATGTACCGCCGCCAATGCCGCTTCTCCGCCGC CGCCGCCGCCGGTGGAACGTTGGCGACGGCGCGCCTGTAGAGGTCCCTGATCCGGTTCGC GTCGCCGGTGTTGGCGCTCTCCTCCAGCCTGATGAGGTCGAACCACGCGTCGTAGCACAG CGGGTTCGTGGTCACCGCGCGCTCGTACTGGGACCTCCGCTTGGTGACGATGCTGTCCTC GACGCCATGGCGGTCGCCGAACCGCTTCTCGAGAGAGAGGAGCTTCTCGCGCAGCTCCTC GGCGCGGGGCTCGGGCGGCTCGCCACGGAGCGCGTGCTGGTATATTGCACGCGCTCGGTC CGGCTCCCCGCACCGCTCCTCGAAGTCGGCGAACGCGGCGAGCAGCACGGCGGTGTCGTC GTTGTCGCCGGCGGCGGCGAGCAGGCTCCCGGCGTGCTCGTACACGCGGGGCGCGCGGTC CAGGTTCTTCAGTTTCGTCTCGAACTCGGCGAAAAGGATGAACGCGTCGGCGCACGGGAG AGCAGCAACATGCCGCTCGTGCACGGCTCTGGCACGGTCCAGCTCGCCGTGGCGGAGCTC GAACGCGGCGTACGCGGCCCAGGCATCGGCGCCGGGGCGCCAAGACGTCCACCTATCGAA CACTACGCGGGCGTTGTCTGTGGCGCCGAGGAGATCCTCCATGCGGAGGTACTCCGACCA GATGCGGTCAGCGCGCGGGAGGATCGCCACGGCGCGGTCAAGTACGTTGCGCGCGTGCCC GACGCGGCCGCCACGAGCCTCGAACTGCGCATACTTTATCCACACACCATGGTCGCGGTA CGCCGGCGCGCCGCCGGCCAGCGCGCGCTCGTACACGGATCGCGCGCGGGCGGGGTCGCC GCCGCCGCCGCCGGGGGACTCCTCCCACCGCGCGTACCTCATCCACTCCGACGACGCGTC GCCGCATCCTCCGCGACCGCTGCCGGCTCGGCGGACGATGGCCTCGAACCGTGCGCGTCG CTCGAGCCGGTGCTCGGCGAGCTCGTCGGCATCGACGATCCTCCTCTTCTTGGACTCCGC CGGCAGGCAGACGGTCACCGATCCATCGCCGTGCAGTTCGCGGGCCTCACGGATGAGATG CTCGGCCGTGAGCTGCACGGGCGCCGGTGCTTTGTTCTTGACGCGGCGGGGGGTCGGCAG CATCGCCAATAACTGGAACTGGATACAGGTGGAGAAGTGCCGATGAGTTGTGGTGTCCTA TTATTATAGGCCGCCGAGGAAGGCCAGGCCGGTACACAATGGAAATACGAATCGGGCCCG GTCCTTTGTTCCTTTGGATTTTTTTCGTTTTTAGATTTTTTTTTAATATTTACAGAAATA A



consensusID : consensus_2528#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2206
fasta sequence
                              [CTAATTCCACGGCAATAACATACAACAAGGTTGTTAGAACAGAAAGATTTACACTCTAATAAGTAATAACATGGCCACTGTTCTTCCATTCGTAAGCAGCTTTCATCAGTTTGAAGCCAGCTGCTGCCGTTGCATCCTCTTCATCACCAAAAATGTAATCGAAGAACTCCTCGCATCCTCCTCCTCCGCCATTGCCGTCGGCGAGGAGACTCCTCTTCCTCTTCACCCTTCTCGGCGTCTTCTTCTCGACCGGCTCCACCTCTCCGAGGTCGCCGAACGCGGCCTCCTTCGCCAGCCATTGTTGGAGAAGCATCGCCCTTGCCTCCTTCATGGCGGGATCATCAGCGCATCCCCTGAAGTGTTCGTCCGCTCTTCGGCATACGGCGCGGCACCTCCGGACCCGCTCGGCCTTCTCCGCCGCGTTCCCGGCGATGGCGGCGCCGCCGGAGCACGCCGTGGCCTCGAACTCGGCGTAGCTCACCCACACGTTGAGGTGTTGTGTTTTGCCGAGAAGCCTCTCGTAGAGCTGCCTCGCTCTGTCGAGCTCGCCGGCGTCGATCTCGAACTGGATGTAGTCCGTCCACACTAGCTCCGGGGCGTCCAGCGCCGGCTGAGAGACGGCGAGGTCGTATACGGATCGGGCGCGGTCGGTCTCGCCCAGCTTCTTCTCCAACGCGGCGTAGCTTCTCCATACGTGGCTGCTGCTCGGAGCGTGCTCGATGAACTTCTGGGACAGAATCCGGCACCGGCCGACGTTGCCGAGCTGGAGCTCGATCTCGATGTACCTCCTGGATAGCTTCGGCCGGGGCGCGACGCCGATCGCGTTGCCGAGGAGCCGCCGCGCCGCGGCGAGGTTCTTGTCACGGATCTCGAGCTCCGCCGCCATGACGCAGATATTGGAGAAGGAGAACTTCTTGTGTGGGATCGTCCTGAGGCACTCCCGGTACACGCCGCGGGCGCGCGCCACGTCCTCCGCGTCGAGCTCCTCGAAGAGGGCGTAGTTGATCCAGAGGTAGATGTACCGCCGCCAATGCCGCTTCTCCGCCGCCGCCGCCGCCGGTGGAACGTTGGCGACGGCGCGCCTGTAGAGGTCCCTGATCCGGTTCGCGTCGCCGGTGTTGGCGCTCTCCTCCAGCCTGATGAGGTCGAACCACGCGTCGTAGCACAGCGGGTTCGTGGTCACCGCGCGCTCGTACTGGGACCTCCGCTTGGTGACGATGCTGTCCTCGACGCCATGGCGGTCGCCGAACCGCTTCTCGAGAGAGAGGAGCTTCTCGCGCAGCTCCTCGGCGCGGGGCTCGGGCGGCTCGCCACGGAGCGCGTGCTGGTATATTGCACGCGCTCGGTCCGGCTCCCCGCACCGCTCCTCGAAGTCGGCGAACGCGGCGAGCAGCACGGCGGTGTCGTCGTTGTCGCCGGCGGCGGCGAGCAGGCTCCCGGCGTGCTCGTACACGCGGGGCGCGCGGTCCAGGTTCTTCAGTTTCGTCTCGAACTCGGCGAAAAGGATGAACGCGTCGGCGCACGGGAGAGCAGCAACATGCCGCTCGTGCACGGCTCTGGCACGGTCCAGCTCGCCGTGGCGGAGCTCGAACGCGGCGTACGCGGCCCAGGCATCGGCGCCGGGGCGCCAAGACGTCCACCTATCGAACACTACGCGGGCGTTGTCTGTGGCGCCGAGGAGGTCCTCCATGCGGAGGTACTCCGACCAGATGCGGTCAGCGCGCGGGAGGATCGCCACGGCGCGGTCAAGTACGTTGCGCGCGTGCCCGACGCGGCCGCCACGAGCCTCGAACTGCGCATACTTTATCCACACACCATGGTCGCGGTACGCCGGCGCGCCGCCGGCCAGCGCGCGCTCGTACACGGATCGCGCGCGGGCGGGGTCGCCGCCGCCGCCGCCGGGGGACTCCTCCCACCGCGCGTACCTCATCCACTCCGACGACGCGTCGCCGCATCCTCCGCGACCGCTGCCGGCTCGGCGGACGATGGCCTCGAACCGTGCGCGTCGCTCGAGCCGGTGCTCGGCGAGCTCGTCGGCATCGACGATCCTCCTCTTCTTGGACTCCGCCGGCAGGCAGACGGTCACCGATCCATCGCCGTGCAGTTCGCGGGCCTCACGGATGAGATGCTCGGCCGTGAGCTGCACGGGCGCCGGTGCTTTGTTCTTGACGCGGCGGGGGGTCGGCAGCATCGCCAATAACTGGAA]

[-] EMBL AK070180             [CTAATTCCACGGCAATAACATACAACAAGGTTGTTAGAACAGAAAGATTTACACTCTAATAAGTAATAACATGGCCACTGTTCTTCCATTCGTAAGCAGCTTTCATCAGTTTGAAGCCAGCTGCTGCCGTTGCATCCTCTTCATCACCAAAAATGTAATCGAAGAACTCCTCGCATCCTCCTCCTCCGCCATTGCCGTCGGCGAGGAGACTCCTCTTCCTCTTCACCCTTCTCGGCGTCTTCTTCTCGACCGGCTCCACCTCTCCGAGGTCGCCGAACGCGGCCTCCTTCGCCAGCCATTGTTGGAGAAGCATCGCCCTTGCCTCCTTCATGGCGGGATCATCAGCGCATCCCCTGAAGTGTTCGTCCGCTCTTCGGCATACGGCGCGGCACCTCCGGACCCGCTCGGCCTTCTCCGCCGCGTTCCCGGCGATGGCGGCGCCGCCGGAGCACGCCGTGGCCTCGAACTCGGCGTAGCTCACCCACACGTTGAGGTGTTGTGTTTTGCCGAGAAGCCTCTCGTAGAGCTGCCTCGCTCTGTCGAGCTCGCCGGCGTCGATCTCGAACTGGATGTAGTCCGTCCACACTAGCTCCGGGGCGTCCAGCGCCGGCTGAGAGACGGCGAGGTCGTATACGGATCGGGCGCGGTCGGTCTCGCCCAGCTTCTTCTCCAACGCGGCGTAGCTTCTCCATACGTGGCTGCTGCTCGGAGCGTGCTCGATGAACTTCTGGGACAGAATCCGGCACCGGCCGACGTTGCCGAGCTGGAGCTCGATCTCGATGTACCTCCTGGATAGCTTCGGCCGGGGCGCGACGCCGATCGCGTTGCCGAGGAGCCGCCGCGCCGCGGCGAGGTTCTTGTCACGGATCTCGAGCTCCGCCGCCATGACGCAGATATTGGAGAAGGAGAACTTCTTGTGTGGGATCGTCCTGAGGCACTCCCGGTACACGCCGCGGGCGCGCGCCACGTCCTCCGCGTCGAGCTCCTCGAAGAGGGCGTAGTTGATCCAGAGGTAGATGTACCGCCGCCAATGCCGCTTCTCCGCCGCCGCCGCCGCCGGTGGAACGTTGGCGACGGCGCGCCTGTAGAGGTCCCTGATCCGGTTCGCGTCGCCGGTGTTGGCGCTCTCCTCCAGCCTGATGAGGTCGAACCACGCGTCGTAGCACAGCGGGTTCGTGGTCACCGCGCGCTCGTACTGGGACCTCCGCTTGGTGACGATGCTGTCCTCGACGCCATGGCGGTCGCCGAACCGCTTCTCGAGAGAGAGGAGCTTCTCGCGCAGCTCCTCGGCGCGGGGCTCGGGCGGCTCGCCACGGAGCGCGTGCTGGTATATTGCACGCGCTCGGTCCGGCTCCCCGCACCGCTCCTCGAAGTCGGCGAACGCGGCGAGCAGCACGGCGGTGTCGTCGTTGTCGCCGGCGGCGGCGAGCAGGCTCCCGGCGTGCTCGTACACGCGGGGCGCGCGGTCCAGGTTCTTCAGTTTCGTCTCGAACTCGGCGAAAAGGATGAACGCGTCGGCGCACGGGAGAGCAGCAACATGCCGCTCGTGCACGGCTCTGGCACGGTCCAGCTCGCCGTGGCGGAGCTCGAACGCGGCGTACGCGGCCCAGGCATCGGCGCCGGGGCGCCAAGACGTCCACCTATCGAACACTACGCGGGCGTTGTCTGTGGCGCCGAGGAGGTCCTCCATGCGGAGGTACTCCGACCAGATGCGGTCAGCGCGCGGGAGGATCGCCACGGCGCGGTCAAGTACGTTGCGCGCGTGCCCGACGCGGCCGCCACGAGCCTCGAACTGCGCATACTTTATCCACACACCATGGTCGCGGTACGCCGGCGCGCCGCCGGCCAGCGCGCGCTCGTACACGGATCGCGCGCGGGCGGGGTCGCCGCCGCCGCCGCCGGGGGACTCCTCCCACCGCGCGTACCTCATCCACTCCGACGACGCGTCGCCGCATCCTCCGCGACCGCTGCCGGCTCGGCGGACGATGGCCTCGAACCGTGCGCGTCGCTCGAGCCGGTGCTCGGCGAGCTCGTCGGCATCGACGATCCTCCTCTTCTTGGACTCCGCCGGCAGGCAGACGGTCACCGATCCATCGCCGTGCAGTTCGCGGGCCTCACGGATGAGATGCTCGGCCGTGAGCTGCACGGGCGCCGGTGCTTTGTTCTTGACGCGGCGGGGGGTCGGCAGCATCGCCAATAACTGGAA]


>consensus_2528#1 CTAATTCCACGGCAATAACATACAACAAGGTTGTTAGAACAGAAAGATTTACACTCTAAT AAGTAATAACATGGCCACTGTTCTTCCATTCGTAAGCAGCTTTCATCAGTTTGAAGCCAG CTGCTGCCGTTGCATCCTCTTCATCACCAAAAATGTAATCGAAGAACTCCTCGCATCCTC CTCCTCCGCCATTGCCGTCGGCGAGGAGACTCCTCTTCCTCTTCACCCTTCTCGGCGTCT TCTTCTCGACCGGCTCCACCTCTCCGAGGTCGCCGAACGCGGCCTCCTTCGCCAGCCATT GTTGGAGAAGCATCGCCCTTGCCTCCTTCATGGCGGGATCATCAGCGCATCCCCTGAAGT GTTCGTCCGCTCTTCGGCATACGGCGCGGCACCTCCGGACCCGCTCGGCCTTCTCCGCCG CGTTCCCGGCGATGGCGGCGCCGCCGGAGCACGCCGTGGCCTCGAACTCGGCGTAGCTCA CCCACACGTTGAGGTGTTGTGTTTTGCCGAGAAGCCTCTCGTAGAGCTGCCTCGCTCTGT CGAGCTCGCCGGCGTCGATCTCGAACTGGATGTAGTCCGTCCACACTAGCTCCGGGGCGT CCAGCGCCGGCTGAGAGACGGCGAGGTCGTATACGGATCGGGCGCGGTCGGTCTCGCCCA GCTTCTTCTCCAACGCGGCGTAGCTTCTCCATACGTGGCTGCTGCTCGGAGCGTGCTCGA TGAACTTCTGGGACAGAATCCGGCACCGGCCGACGTTGCCGAGCTGGAGCTCGATCTCGA TGTACCTCCTGGATAGCTTCGGCCGGGGCGCGACGCCGATCGCGTTGCCGAGGAGCCGCC GCGCCGCGGCGAGGTTCTTGTCACGGATCTCGAGCTCCGCCGCCATGACGCAGATATTGG AGAAGGAGAACTTCTTGTGTGGGATCGTCCTGAGGCACTCCCGGTACACGCCGCGGGCGC GCGCCACGTCCTCCGCGTCGAGCTCCTCGAAGAGGGCGTAGTTGATCCAGAGGTAGATGT ACCGCCGCCAATGCCGCTTCTCCGCCGCCGCCGCCGCCGGTGGAACGTTGGCGACGGCGC GCCTGTAGAGGTCCCTGATCCGGTTCGCGTCGCCGGTGTTGGCGCTCTCCTCCAGCCTGA TGAGGTCGAACCACGCGTCGTAGCACAGCGGGTTCGTGGTCACCGCGCGCTCGTACTGGG ACCTCCGCTTGGTGACGATGCTGTCCTCGACGCCATGGCGGTCGCCGAACCGCTTCTCGA GAGAGAGGAGCTTCTCGCGCAGCTCCTCGGCGCGGGGCTCGGGCGGCTCGCCACGGAGCG CGTGCTGGTATATTGCACGCGCTCGGTCCGGCTCCCCGCACCGCTCCTCGAAGTCGGCGA ACGCGGCGAGCAGCACGGCGGTGTCGTCGTTGTCGCCGGCGGCGGCGAGCAGGCTCCCGG CGTGCTCGTACACGCGGGGCGCGCGGTCCAGGTTCTTCAGTTTCGTCTCGAACTCGGCGA AAAGGATGAACGCGTCGGCGCACGGGAGAGCAGCAACATGCCGCTCGTGCACGGCTCTGG CACGGTCCAGCTCGCCGTGGCGGAGCTCGAACGCGGCGTACGCGGCCCAGGCATCGGCGC CGGGGCGCCAAGACGTCCACCTATCGAACACTACGCGGGCGTTGTCTGTGGCGCCGAGGA GGTCCTCCATGCGGAGGTACTCCGACCAGATGCGGTCAGCGCGCGGGAGGATCGCCACGG CGCGGTCAAGTACGTTGCGCGCGTGCCCGACGCGGCCGCCACGAGCCTCGAACTGCGCAT ACTTTATCCACACACCATGGTCGCGGTACGCCGGCGCGCCGCCGGCCAGCGCGCGCTCGT ACACGGATCGCGCGCGGGCGGGGTCGCCGCCGCCGCCGCCGGGGGACTCCTCCCACCGCG CGTACCTCATCCACTCCGACGACGCGTCGCCGCATCCTCCGCGACCGCTGCCGGCTCGGC GGACGATGGCCTCGAACCGTGCGCGTCGCTCGAGCCGGTGCTCGGCGAGCTCGTCGGCAT CGACGATCCTCCTCTTCTTGGACTCCGCCGGCAGGCAGACGGTCACCGATCCATCGCCGT GCAGTTCGCGGGCCTCACGGATGAGATGCTCGGCCGTGAGCTGCACGGGCGCCGGTGCTT TGTTCTTGACGCGGCGGGGGGTCGGCAGCATCGCCAATAACTGGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2528#0      AACAATACTAGCCTAATGGAGAAGCTGGCAGTAACCACTGACATTATCTGAAGAAATTAC 60
consensus_2528#1      -------------------------------------CTAATTCCACGGCAATAACATAC 23
                                                           ** *    *    ** **  ***

consensus_2528#0      TTGCCGGTTACAGCAATGAAGAGAAGCTGAACCCAGAGGAGTGGTACTGAGAACACAGGT 120
consensus_2528#1      AACAAGGTTGTTAGAACAGAAAGAT-TTACACTCTAATAAGTAATAACATGGCCACTGTT 82
                           ****     **   * ***   *  ** *  *  ***  **    *  *** * *

consensus_2528#0      GC-CAATACA-----ATCTTTCATCAGTTTGAAGCCAGCTGCTGCCGTTGCATCCTCTTC 174
consensus_2528#1      CTTCCATTCGTAAGCAGCTTTCATCAGTTTGAAGCCAGCTGCTGCCGTTGCATCCTCTTC 142
                         * ** *      * *******************************************

consensus_2528#0      ATCACCAAAAATGTAATCGAAGAACTCCTCGCATCCTCCTCCTCCGCCATTGCCGTCGGC 234
consensus_2528#1      ATCACCAAAAATGTAATCGAAGAACTCCTCGCATCCTCCTCCTCCGCCATTGCCGTCGGC 202
                      ************************************************************

consensus_2528#0      GAGGAGACTCCTCTTCCTCTTCACCCTTCTCGGCGTCTTCTTCTCGACCGGCTCCACCTC 294
consensus_2528#1      GAGGAGACTCCTCTTCCTCTTCACCCTTCTCGGCGTCTTCTTCTCGACCGGCTCCACCTC 262
                      ************************************************************

consensus_2528#0      TCCGAGGTCGCCGAACGCGGCCTCCTTCGCCAGCCATTGTTGGAGAAGCATCGCCCTTGC 354
consensus_2528#1      TCCGAGGTCGCCGAACGCGGCCTCCTTCGCCAGCCATTGTTGGAGAAGCATCGCCCTTGC 322
                      ************************************************************

consensus_2528#0      CTCCTTCATGGCGGGATCATCAGCGCATCCCCTGAAGTGTTCGTCCGCTCTTCGGCATAC 414
consensus_2528#1      CTCCTTCATGGCGGGATCATCAGCGCATCCCCTGAAGTGTTCGTCCGCTCTTCGGCATAC 382
                      ************************************************************

consensus_2528#0      GGCGCGGCACCTCCGGACCCGCTCGGCCTTCTCCGCCGCGTTCCCGGCGATGGCGGCGCC 474
consensus_2528#1      GGCGCGGCACCTCCGGACCCGCTCGGCCTTCTCCGCCGCGTTCCCGGCGATGGCGGCGCC 442
                      ************************************************************

consensus_2528#0      GCCGGAGCACGCCGTGGCCTCGAACTCGGCGTAGCTCACCCACACGTTGAGGTGTTGTGT 534
consensus_2528#1      GCCGGAGCACGCCGTGGCCTCGAACTCGGCGTAGCTCACCCACACGTTGAGGTGTTGTGT 502
                      ************************************************************

consensus_2528#0      TTTGCCGAGAAGCCTCTCGTAGAGCTGCCTCGCTCTGTCGAGCTCGCCGGCGTCGATCTC 594
consensus_2528#1      TTTGCCGAGAAGCCTCTCGTAGAGCTGCCTCGCTCTGTCGAGCTCGCCGGCGTCGATCTC 562
                      ************************************************************

consensus_2528#0      GAACTGGATGTAGTCCGTCCACACTAGCTCCGGGGCGTCCAGCGCCGGCTGAGAGACGGC 654
consensus_2528#1      GAACTGGATGTAGTCCGTCCACACTAGCTCCGGGGCGTCCAGCGCCGGCTGAGAGACGGC 622
                      ************************************************************

consensus_2528#0      GAGGTCGTATACGGATCGGGCGCGGTCGGTCTCGCCCAGCTTCTTCTCCAACGCGGCGTA 714
consensus_2528#1      GAGGTCGTATACGGATCGGGCGCGGTCGGTCTCGCCCAGCTTCTTCTCCAACGCGGCGTA 682
                      ************************************************************

consensus_2528#0      GCTTCTCCATACGTGGCTGCTGCTCGGAGCGTGCTCGATGAACTTCTGGGACAGAATCCG 774
consensus_2528#1      GCTTCTCCATACGTGGCTGCTGCTCGGAGCGTGCTCGATGAACTTCTGGGACAGAATCCG 742
                      ************************************************************

consensus_2528#0      GCACCGGCCGACGTTGCCGAGCTGGAGCTCGATCTCGATGTACCTCCTGGATAGCTTCGG 834
consensus_2528#1      GCACCGGCCGACGTTGCCGAGCTGGAGCTCGATCTCGATGTACCTCCTGGATAGCTTCGG 802
                      ************************************************************

consensus_2528#0      CCGGGGCGCGACGCCGATCGCGTTGCCGAGGAGCCGCCGCGCCGCGGCGAGGTTCTTGTC 894
consensus_2528#1      CCGGGGCGCGACGCCGATCGCGTTGCCGAGGAGCCGCCGCGCCGCGGCGAGGTTCTTGTC 862
                      ************************************************************

consensus_2528#0      ACGGATCTCGAGCTCCGCCGCCATGACGCAGATATTGGAGAAGGAGAACTTCTTGTGTGG 954
consensus_2528#1      ACGGATCTCGAGCTCCGCCGCCATGACGCAGATATTGGAGAAGGAGAACTTCTTGTGTGG 922
                      ************************************************************

consensus_2528#0      GATCGTCCTGAGGCACTCCCGGTACACGCCGCGGGCGCGCGCCACGTCCTCCGCGTCGAG 1014
consensus_2528#1      GATCGTCCTGAGGCACTCCCGGTACACGCCGCGGGCGCGCGCCACGTCCTCCGCGTCGAG 982
                      ************************************************************

consensus_2528#0      CTCCTCGAAGAGGGCGTAGTTGATCCAGAGGTAGATGTACCGCCGCCAATGCCGCTTCTC 1074
consensus_2528#1      CTCCTCGAAGAGGGCGTAGTTGATCCAGAGGTAGATGTACCGCCGCCAATGCCGCTTCTC 1042
                      ************************************************************

consensus_2528#0      CGCCGCCGCCGCCGCCGGTGGAACGTTGGCGACGGCGCGCCTGTAGAGGTCCCTGATCCG 1134
consensus_2528#1      CGCCGCCGCCGCCGCCGGTGGAACGTTGGCGACGGCGCGCCTGTAGAGGTCCCTGATCCG 1102
                      ************************************************************

consensus_2528#0      GTTCGCGTCGCCGGTGTTGGCGCTCTCCTCCAGCCTGATGAGGTCGAACCACGCGTCGTA 1194
consensus_2528#1      GTTCGCGTCGCCGGTGTTGGCGCTCTCCTCCAGCCTGATGAGGTCGAACCACGCGTCGTA 1162
                      ************************************************************

consensus_2528#0      GCACAGCGGGTTCGTGGTCACCGCGCGCTCGTACTGGGACCTCCGCTTGGTGACGATGCT 1254
consensus_2528#1      GCACAGCGGGTTCGTGGTCACCGCGCGCTCGTACTGGGACCTCCGCTTGGTGACGATGCT 1222
                      ************************************************************

consensus_2528#0      GTCCTCGACGCCATGGCGGTCGCCGAACCGCTTCTCGAGAGAGAGGAGCTTCTCGCGCAG 1314
consensus_2528#1      GTCCTCGACGCCATGGCGGTCGCCGAACCGCTTCTCGAGAGAGAGGAGCTTCTCGCGCAG 1282
                      ************************************************************

consensus_2528#0      CTCCTCGGCGCGGGGCTCGGGCGGCTCGCCACGGAGCGCGTGCTGGTATATTGCACGCGC 1374
consensus_2528#1      CTCCTCGGCGCGGGGCTCGGGCGGCTCGCCACGGAGCGCGTGCTGGTATATTGCACGCGC 1342
                      ************************************************************

consensus_2528#0      TCGGTCCGGCTCCCCGCACCGCTCCTCGAAGTCGGCGAACGCGGCGAGCAGCACGGCGGT 1434
consensus_2528#1      TCGGTCCGGCTCCCCGCACCGCTCCTCGAAGTCGGCGAACGCGGCGAGCAGCACGGCGGT 1402
                      ************************************************************

consensus_2528#0      GTCGTCGTTGTCGCCGGCGGCGGCGAGCAGGCTCCCGGCGTGCTCGTACACGCGGGGCGC 1494
consensus_2528#1      GTCGTCGTTGTCGCCGGCGGCGGCGAGCAGGCTCCCGGCGTGCTCGTACACGCGGGGCGC 1462
                      ************************************************************

consensus_2528#0      GCGGTCCAGGTTCTTCAGTTTCGTCTCGAACTCGGCGAAAAGGATGAACGCGTCGGCGCA 1554
consensus_2528#1      GCGGTCCAGGTTCTTCAGTTTCGTCTCGAACTCGGCGAAAAGGATGAACGCGTCGGCGCA 1522
                      ************************************************************

consensus_2528#0      CGGGAGAGCAGCAACATGCCGCTCGTGCACGGCTCTGGCACGGTCCAGCTCGCCGTGGCG 1614
consensus_2528#1      CGGGAGAGCAGCAACATGCCGCTCGTGCACGGCTCTGGCACGGTCCAGCTCGCCGTGGCG 1582
                      ************************************************************

consensus_2528#0      GAGCTCGAACGCGGCGTACGCGGCCCAGGCATCGGCGCCGGGGCGCCAAGACGTCCACCT 1674
consensus_2528#1      GAGCTCGAACGCGGCGTACGCGGCCCAGGCATCGGCGCCGGGGCGCCAAGACGTCCACCT 1642
                      ************************************************************

consensus_2528#0      ATCGAACACTACGCGGGCGTTGTCTGTGGCGCCGAGGAGATCCTCCATGCGGAGGTACTC 1734
consensus_2528#1      ATCGAACACTACGCGGGCGTTGTCTGTGGCGCCGAGGAGGTCCTCCATGCGGAGGTACTC 1702
                      *************************************** ********************

consensus_2528#0      CGACCAGATGCGGTCAGCGCGCGGGAGGATCGCCACGGCGCGGTCAAGTACGTTGCGCGC 1794
consensus_2528#1      CGACCAGATGCGGTCAGCGCGCGGGAGGATCGCCACGGCGCGGTCAAGTACGTTGCGCGC 1762
                      ************************************************************

consensus_2528#0      GTGCCCGACGCGGCCGCCACGAGCCTCGAACTGCGCATACTTTATCCACACACCATGGTC 1854
consensus_2528#1      GTGCCCGACGCGGCCGCCACGAGCCTCGAACTGCGCATACTTTATCCACACACCATGGTC 1822
                      ************************************************************

consensus_2528#0      GCGGTACGCCGGCGCGCCGCCGGCCAGCGCGCGCTCGTACACGGATCGCGCGCGGGCGGG 1914
consensus_2528#1      GCGGTACGCCGGCGCGCCGCCGGCCAGCGCGCGCTCGTACACGGATCGCGCGCGGGCGGG 1882
                      ************************************************************

consensus_2528#0      GTCGCCGCCGCCGCCGCCGGGGGACTCCTCCCACCGCGCGTACCTCATCCACTCCGACGA 1974
consensus_2528#1      GTCGCCGCCGCCGCCGCCGGGGGACTCCTCCCACCGCGCGTACCTCATCCACTCCGACGA 1942
                      ************************************************************

consensus_2528#0      CGCGTCGCCGCATCCTCCGCGACCGCTGCCGGCTCGGCGGACGATGGCCTCGAACCGTGC 2034
consensus_2528#1      CGCGTCGCCGCATCCTCCGCGACCGCTGCCGGCTCGGCGGACGATGGCCTCGAACCGTGC 2002
                      ************************************************************

consensus_2528#0      GCGTCGCTCGAGCCGGTGCTCGGCGAGCTCGTCGGCATCGACGATCCTCCTCTTCTTGGA 2094
consensus_2528#1      GCGTCGCTCGAGCCGGTGCTCGGCGAGCTCGTCGGCATCGACGATCCTCCTCTTCTTGGA 2062
                      ************************************************************

consensus_2528#0      CTCCGCCGGCAGGCAGACGGTCACCGATCCATCGCCGTGCAGTTCGCGGGCCTCACGGAT 2154
consensus_2528#1      CTCCGCCGGCAGGCAGACGGTCACCGATCCATCGCCGTGCAGTTCGCGGGCCTCACGGAT 2122
                      ************************************************************

consensus_2528#0      GAGATGCTCGGCCGTGAGCTGCACGGGCGCCGGTGCTTTGTTCTTGACGCGGCGGGGGGT 2214
consensus_2528#1      GAGATGCTCGGCCGTGAGCTGCACGGGCGCCGGTGCTTTGTTCTTGACGCGGCGGGGGGT 2182
                      ************************************************************

consensus_2528#0      CGGCAGCATCGCCAATAACTGGAACTGGATACAGGTGGAGAAGTGCCGATGAGTTGTGGT 2274
consensus_2528#1      CGGCAGCATCGCCAATAACTGGAA------------------------------------ 2206
                      ************************                                    

consensus_2528#0      GTCCTATTATTATAGGCCGCCGAGGAAGGCCAGGCCGGTACACAATGGAAATACGAATCG 2334
consensus_2528#1      ------------------------------------------------------------
                                                                                  

consensus_2528#0      GGCCCGGTCCTTTGTTCCTTTGGATTTTTTTCGTTTTTAGATTTTTTTTTAATATTTACA 2394
consensus_2528#1      ------------------------------------------------------------
                                                                                  

consensus_2528#0      GAAATAA 2401
consensus_2528#1      -------
                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)