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Oryza sativa
cluster # 2546 cluster # 2546       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2546#0 length = 2077 sequences # 1  
consensus_2546#1 length = 2052 sequences # 1  

consensusID : consensus_2546#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2077
fasta sequence
                              [AGAAGGCACGGGTCCAACCGATTACGGGGCACGCGCGGCGGCGGCGGCGGAGTGACCGGCGCGACGCCGCAGGCCTGCAATGTGGGCATTCCTGATCTCCCCGCCGCTCCGGGATGCCCCCCCCCCCTCCGTCGCCGGTGCCGTTGAGCGTGCTTGCCCCGCGGTGAGATTGTTTGGTTCGGCCGCGGCTAGGGTTCGGTTTTTCATAGGTTGTTTGGCTTGGCATTTTTCTTTTGCTCTTTGGTGGATCCCAAATAAATGGCTTTTTGTGAGCAAGCGTTTGGAAAACCATAGCCCTGCTGGTGAGATGTGATTTTCATGAACTGGCTTTGGCAGTATGTAAGATTCCAACAACGAGAGTTGGGAATGAAAGAAGGAAGTGACCCTGCCAACTACTACAAGATTTTGAAGGTCTCTTGAAAGAGCCTAAGAAATTACCACTGAAATAAAATATGATTATGCCATTCCTTGTGGTCCTGGCACTGCACCTGTAAATTCTAATCCTTACCAGCATTGATAACTGCACAAAGACAACATTGAGGAAATGGCGCACCATATGTTTTTTCCTCAAAACTGCAACACATGCTTGCTAACTGTGTTATTGAACTGGGTGCAAGCCCTTTCAAGTTACCTTTAGTCTTAGTGAAGATTGTGGAAGGGTGGGAGTTTCAAATGTCTAATGAATTCAGTTCTGCAGCTTTATCTTATTAAGTTCACTATTGTGTTCTTGGATGACGTCTTGGTATTACAGTCTTTCAAGGCACATGTGAAAAACTTGGAGCATGTCCTGACCACACCGTGGCAACATCAACTCTGTGTTAGACGCAGAAATGTAGTTTTGCACAGAGAAGACTGGAGTACCTTGGTCATGTTCTTAAGAAAAGGTGGCCACTAATATGCACAAGACATAAGCAATGTTGCCCTGGCTACAAGATAGAATTGATATGGAGTTGTGTGGTTGCTAGGGCTAATGGGGGCACTGTCAGCTCTTTTGTTTGTCAGGCATTATTGAATCATCTCTGAGCCACAAGCTAATCTCCTCAAAGGAAGGTGTTACATTGAGAGTTTGGAACAGAGAAGTAGCTTCAGATTTTCAATGATTGAAGGACAATCCAGATTTCATAAGGCTTTTGAAGTCAATGGAAACTTGAGATGATGGTAGAGGTTCCATTCACATGCAAAGTGAGCACCTGATAGCTTACCTGGCCAAGTCTCTCAATTCAATGCATCAAAAGTTGTCTAAGAGAGAATTTCTGGCATTGATCATGGTCGTATACTGCTGGAGACCATACCTACAGAAAGTGGAATTTGTAATCAGGACCTGCAGCCATGTTATTTATAAGACCATCAGTTTCTGTATGACATGCCCGCAAAACGCAATGACAAAACCTAATGAATTGCAGTTCATGATCCAGTGCAAGAAGGTCGAGAGAAAGGAATGCAGATCAATGCCTTGGCTTGTACTTCCTCATCACTTACAGTCCAAGCTGTCTCAGAATGCCAACAGAGTTTGTCTTCAGGAGAGAACAGCAGCTTAGGCATCAATCCTCACTACATCCATTCCCGTGGTTGCGTCTTTTATCGTGGACATCACAGGTTGCACCATTTCTTAAGAAGAATGATACTTTTGTAGCAGCACTAAAGAAGGAACTGTCTGAACACATTGCTGATGTGCATGTTCAAAACGATTTTCTCGATGGCATGTTCACTTTCTGTGGTGCTACAATGGCACCTGCACCTCTAAATAGAGCTCCCATAAATGTGTAAATGATGGGATACACGATTGTGCCACAGGCAAAGGAAAGAGATTGAGAGGTTTTGAGAAGGGGCCCAGTTCATCGAGATTGTGGCAATGGTGGTACTCCAAGCCAAAAAAAGAAAAAAAATATTGGAGGCCTCAGGTCCGAAGAATTGAAGGATGTCAGAATGTGAGAAGTGTGAAGCAGATAAGGGTTTTTTCTTCTTTTTTTTTTCTCTTTTGGTGTGTAATCTGTTGAGGATGGTGCCTGATGATAGAGTAGTTCAAGCTTTGCAAGTGGGTTGTATTTTCCTGTTCCCAGAATCTAATAGAAACTGA]

[+] EMBL AK072889             [AGAAGGCACGGGTCCAACCGATTACGGGGCACGCGCGGCGGCGGCGGCGGAGTGACCGGCGCGACGCCGCAGGCCTGCAATGTGGGCATTCCTGATCTCCCCGCCGCTCCGGGATGCCCCCCCCCCCTCCGTCGCCGGTGCCGTTGAGCGTGCTTGCCCCGCGGTGAGATTGTTTGGTTCGGCCGCGGCTAGGGTTCGGTTTTTCATAGGTTGTTTGGCTTGGCATTTTTCTTTTGCTCTTTGGTGGATCCCAAATAAATGGCTTTTTGTGAGCAAGCGTTTGGAAAACCATAGCCCTGCTGGTGAGATGTGATTTTCATGAACTGGCTTTGGCAGTATGTAAGATTCCAACAACGAGAGTTGGGAATGAAAGAAGGAAGTGACCCTGCCAACTACTACAAGATTTTGAAGGTCTCTTGAAAGAGCCTAAGAAATTACCACTGAAATAAAATATGATTATGCCATTCCTTGTGGTCCTGGCACTGCACCTGTAAATTCTAATCCTTACCAGCATTGATAACTGCACAAAGACAACATTGAGGAAATGGCGCACCATATGTTTTTTCCTCAAAACTGCAACACATGCTTGCTAACTGTGTTATTGAACTGGGTGCAAGCCCTTTCAAGTTACCTTTAGTCTTAGTGAAGATTGTGGAAGGGTGGGAGTTTCAAATGTCTAATGAATTCAGTTCTGCAGCTTTATCTTATTAAGTTCACTATTGTGTTCTTGGATGACGTCTTGGTATTACAGTCTTTCAAGGCACATGTGAAAAACTTGGAGCATGTCCTGACCACACCGTGGCAACATCAACTCTGTGTTAGACGCAGAAATGTAGTTTTGCACAGAGAAGACTGGAGTACCTTGGTCATGTTCTTAAGAAAAGGTGGCCACTAATATGCACAAGACATAAGCAATGTTGCCCTGGCTACAAGATAGAATTGATATGGAGTTGTGTGGTTGCTAGGGCTAATGGGGGCACTGTCAGCTCTTTTGTTTGTCAGGCATTATTGAATCATCTCTGAGCCACAAGCTAATCTCCTCAAAGGAAGGTGTTACATTGAGAGTTTGGAACAGAGAAGTAGCTTCAGATTTTCAATGATTGAAGGACAATCCAGATTTCATAAGGCTTTTGAAGTCAATGGAAACTTGAGATGATGGTAGAGGTTCCATTCACATGCAAAGTGAGCACCTGATAGCTTACCTGGCCAAGTCTCTCAATTCAATGCATCAAAAGTTGTCTAAGAGAGAATTTCTGGCATTGATCATGGTCGTATACTGCTGGAGACCATACCTACAGAAAGTGGAATTTGTAATCAGGACCTGCAGCCATGTTATTTATAAGACCATCAGTTTCTGTATGACATGCCCGCAAAACGCAATGACAAAACCTAATGAATTGCAGTTCATGATCCAGTGCAAGAAGGTCGAGAGAAAGGAATGCAGATCAATGCCTTGGCTTGTACTTCCTCATCACTTACAGTCCAAGCTGTCTCAGAATGCCAACAGAGTTTGTCTTCAGGAGAGAACAGCAGCTTAGGCATCAATCCTCACTACATCCATTCCCGTGGTTGCGTCTTTTATCGTGGACATCACAGGTTGCACCATTTCTTAAGAAGAATGATACTTTTGTAGCAGCACTAAAGAAGGAACTGTCTGAACACATTGCTGATGTGCATGTTCAAAACGATTTTCTCGATGGCATGTTCACTTTCTGTGGTGCTACAATGGCACCTGCACCTCTAAATAGAGCTCCCATAAATGTGTAAATGATGGGATACACGATTGTGCCACAGGCAAAGGAAAGAGATTGAGAGGTTTTGAGAAGGGGCCCAGTTCATCGAGATTGTGGCAATGGTGGTACTCCAAGCCAAAAAAAGAAAAAAAATATTGGAGGCCTCAGGTCCGAAGAATTGAAGGATGTCAGAATGTGAGAAGTGTGAAGCAGATAAGGGTTTTTTCTTCTTTTTTTTTTCTCTTTTGGTGTGTAATCTGTTGAGGATGGTGCCTGATGATAGAGTAGTTCAAGCTTTGCAAGTGGGTTGTATTTTCCTGTTCCCAGAATCTAATAGAAACTGA]


>consensus_2546#0 AGAAGGCACGGGTCCAACCGATTACGGGGCACGCGCGGCGGCGGCGGCGGAGTGACCGGC GCGACGCCGCAGGCCTGCAATGTGGGCATTCCTGATCTCCCCGCCGCTCCGGGATGCCCC CCCCCCCTCCGTCGCCGGTGCCGTTGAGCGTGCTTGCCCCGCGGTGAGATTGTTTGGTTC GGCCGCGGCTAGGGTTCGGTTTTTCATAGGTTGTTTGGCTTGGCATTTTTCTTTTGCTCT TTGGTGGATCCCAAATAAATGGCTTTTTGTGAGCAAGCGTTTGGAAAACCATAGCCCTGC TGGTGAGATGTGATTTTCATGAACTGGCTTTGGCAGTATGTAAGATTCCAACAACGAGAG TTGGGAATGAAAGAAGGAAGTGACCCTGCCAACTACTACAAGATTTTGAAGGTCTCTTGA AAGAGCCTAAGAAATTACCACTGAAATAAAATATGATTATGCCATTCCTTGTGGTCCTGG CACTGCACCTGTAAATTCTAATCCTTACCAGCATTGATAACTGCACAAAGACAACATTGA GGAAATGGCGCACCATATGTTTTTTCCTCAAAACTGCAACACATGCTTGCTAACTGTGTT ATTGAACTGGGTGCAAGCCCTTTCAAGTTACCTTTAGTCTTAGTGAAGATTGTGGAAGGG TGGGAGTTTCAAATGTCTAATGAATTCAGTTCTGCAGCTTTATCTTATTAAGTTCACTAT TGTGTTCTTGGATGACGTCTTGGTATTACAGTCTTTCAAGGCACATGTGAAAAACTTGGA GCATGTCCTGACCACACCGTGGCAACATCAACTCTGTGTTAGACGCAGAAATGTAGTTTT GCACAGAGAAGACTGGAGTACCTTGGTCATGTTCTTAAGAAAAGGTGGCCACTAATATGC ACAAGACATAAGCAATGTTGCCCTGGCTACAAGATAGAATTGATATGGAGTTGTGTGGTT GCTAGGGCTAATGGGGGCACTGTCAGCTCTTTTGTTTGTCAGGCATTATTGAATCATCTC TGAGCCACAAGCTAATCTCCTCAAAGGAAGGTGTTACATTGAGAGTTTGGAACAGAGAAG TAGCTTCAGATTTTCAATGATTGAAGGACAATCCAGATTTCATAAGGCTTTTGAAGTCAA TGGAAACTTGAGATGATGGTAGAGGTTCCATTCACATGCAAAGTGAGCACCTGATAGCTT ACCTGGCCAAGTCTCTCAATTCAATGCATCAAAAGTTGTCTAAGAGAGAATTTCTGGCAT TGATCATGGTCGTATACTGCTGGAGACCATACCTACAGAAAGTGGAATTTGTAATCAGGA CCTGCAGCCATGTTATTTATAAGACCATCAGTTTCTGTATGACATGCCCGCAAAACGCAA TGACAAAACCTAATGAATTGCAGTTCATGATCCAGTGCAAGAAGGTCGAGAGAAAGGAAT GCAGATCAATGCCTTGGCTTGTACTTCCTCATCACTTACAGTCCAAGCTGTCTCAGAATG CCAACAGAGTTTGTCTTCAGGAGAGAACAGCAGCTTAGGCATCAATCCTCACTACATCCA TTCCCGTGGTTGCGTCTTTTATCGTGGACATCACAGGTTGCACCATTTCTTAAGAAGAAT GATACTTTTGTAGCAGCACTAAAGAAGGAACTGTCTGAACACATTGCTGATGTGCATGTT CAAAACGATTTTCTCGATGGCATGTTCACTTTCTGTGGTGCTACAATGGCACCTGCACCT CTAAATAGAGCTCCCATAAATGTGTAAATGATGGGATACACGATTGTGCCACAGGCAAAG GAAAGAGATTGAGAGGTTTTGAGAAGGGGCCCAGTTCATCGAGATTGTGGCAATGGTGGT ACTCCAAGCCAAAAAAAGAAAAAAAATATTGGAGGCCTCAGGTCCGAAGAATTGAAGGAT GTCAGAATGTGAGAAGTGTGAAGCAGATAAGGGTTTTTTCTTCTTTTTTTTTTCTCTTTT GGTGTGTAATCTGTTGAGGATGGTGCCTGATGATAGAGTAGTTCAAGCTTTGCAAGTGGG TTGTATTTTCCTGTTCCCAGAATCTAATAGAAACTGA



consensusID : consensus_2546#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2052
fasta sequence
                              [CGGGTCCAACCGATTACGGGGCACGCGCGGCGGCGGCGGCGGAGTGACCGGCGCGACGCCGCAGGCCTGCAATGTGGGCATTCCTGATCTCCCCGCCGCTCCGGGATGCCCCCCCCCCTCCGTCGCCGGTGCCGTTGAGCGTGCTTGCCCCGCGGTGAGATTGTTTGGTTCGGCCGCGGCTAGGGTTCGGGTTGTTTGGCTTGGCATTTTTCTTTTGCTCTTTGGTGGATCCCAAATAAATGGCTTTTTGTGAGCAAGCGTTTGGAAAACCATAGCCCTGCTGGTGAGATGTGATTTTCATGAATTAGGTTTGCCTTGTACAAATAAATGGATTACAGTGGTGGTTGAATATCTCAACACTAAATATTAGAAATGCATGACTTACAGAACTGGCTTTGGCAGTATGTAAGATTCCAACAACGAGAGTTGGGAATGAAAGAAGGAAGTGACCCTGCCAACTACTACAAGATTTTGAAGATCTCTTGAAAGAGCCTAAGAAATTACCACTGAAATAAAATATGATTATGCCATTCCTTGTGGTCCTGGCACTGCACCTGTAAATTCTAATCCTTACCAGCATTGATAACTGCACAAAGACAACATTGAGGAAATGGCGCACCATATGTTTTTTCCTCAAAACTGCAACACATGCTTGCTAACTGTGTTATTGAACTGGGTGCAAGCCCTTTCAAGTTACCTTTAGTCTTAGTGAAGATTGTGGAAGGGTGGGAGTTTCAAATGTCTAATGAATTCAGTTCTGCAGCTTTATCTTATTAAGTTCACTATTGTGTTCTTGGATGACGTCTTGGTATTACAGTCTTTCAAGGCACATGTGAAAAACTTGGAGCATGTCCTGACCACACTGTGGCAACATCAACTCTGTGTTAGACGCAAGAAATGTAGTTTTGCACAGAGAAGACTGGAGTACCTTGGTCATGTTCTTAAGAAAAGGTGGCCACTAATATGCACAAGACATAAGCAATGTTGCCCTGGCTACAAGATAGAATTGATATGGAGTTGTGTGGTTGCTAGGGCTAATGGGGGCACTGTCAGCTCTTTTGTTTGTCAGGCATTATTGAATCATCTCTGAGCCACAAGCTAATCTCCTCAAAGGAAGGTGTTACATTGAGAGTTTGGAACAGAGAAGTAGCTTCAGATTTTCAATGATTGAAGGACAATCCAGATTTCATAAGGCTTTTGAAGTCAATGGAAACTTGAGATGATGGTAGAGGTTCCATTCACATGCAAAGTGAGCACCTGATAGCTTACCTGGCCAAGTCTCTCAATTCAATGCATCAAAAGTTGTCTAAGAGAGAATTTCTGGCATTGATCATGGTCGTATACTGCTGGAGACCATACCTACAGAAAGTGGAATTTGTAATCAGGACCTGCAGCCATGTTATTTATAAGACCATCAGTTTCTGTATGACATGCCCGCAAAACGCAATGACAAAACCTAATGAATTGCAGTTCATGATCCAGTGCAAGAAGGTCAAGAGAAAGGAATGCAGATCAATGCCTTGGCTTGTACTTCCTCATCACTTACAGTCCAAGCTGTCTCAGAATGCCAACAGAGTTTGTCTTCAGGAGGTAATCAGTTCTGAACAATTGTCCTTTGTTTTCTTCAGGAAGATGTTAAAACTGGTACATAAGTAACGATGAGGACTAACACATCTACAACCCTTTCAAGCTACCAATGGGTAGGTCAGGATGATTTGGGAGGAGCGAGAAACCTGAAATTATTATGTCTCTTTGATGAAATATCTGGGTTGAAATTCAATTTTCATAAGATTTAGACGTTTTGTTTCTGAAGTTCTGTTGAGAAGCAAGATAGCTCTTTCAACGCCTCATGGACCAAATGGAAAAAGCTGATGATGAGGTAAAAGGCGACCTATCCTTTTCGTTTCGATAAAGAATGATAGCTTTCAGCCTGATCCAGATGTGTCACTAAACTAGGCGTTTTTAATTGTGAATTTGTGTGGGTGATGCGGATTTTAGTACAGCAAGGTAGGCTGTTGACCTGTTGTAAAGGCATTTCCTGCTGAATGCTTG]

[+] EMBL AK070590             [CGGGTCCAACCGATTACGGGGCACGCGCGGCGGCGGCGGCGGAGTGACCGGCGCGACGCCGCAGGCCTGCAATGTGGGCATTCCTGATCTCCCCGCCGCTCCGGGATGCCCCCCCCCCTCCGTCGCCGGTGCCGTTGAGCGTGCTTGCCCCGCGGTGAGATTGTTTGGTTCGGCCGCGGCTAGGGTTCGGGTTGTTTGGCTTGGCATTTTTCTTTTGCTCTTTGGTGGATCCCAAATAAATGGCTTTTTGTGAGCAAGCGTTTGGAAAACCATAGCCCTGCTGGTGAGATGTGATTTTCATGAATTAGGTTTGCCTTGTACAAATAAATGGATTACAGTGGTGGTTGAATATCTCAACACTAAATATTAGAAATGCATGACTTACAGAACTGGCTTTGGCAGTATGTAAGATTCCAACAACGAGAGTTGGGAATGAAAGAAGGAAGTGACCCTGCCAACTACTACAAGATTTTGAAGATCTCTTGAAAGAGCCTAAGAAATTACCACTGAAATAAAATATGATTATGCCATTCCTTGTGGTCCTGGCACTGCACCTGTAAATTCTAATCCTTACCAGCATTGATAACTGCACAAAGACAACATTGAGGAAATGGCGCACCATATGTTTTTTCCTCAAAACTGCAACACATGCTTGCTAACTGTGTTATTGAACTGGGTGCAAGCCCTTTCAAGTTACCTTTAGTCTTAGTGAAGATTGTGGAAGGGTGGGAGTTTCAAATGTCTAATGAATTCAGTTCTGCAGCTTTATCTTATTAAGTTCACTATTGTGTTCTTGGATGACGTCTTGGTATTACAGTCTTTCAAGGCACATGTGAAAAACTTGGAGCATGTCCTGACCACACTGTGGCAACATCAACTCTGTGTTAGACGCAAGAAATGTAGTTTTGCACAGAGAAGACTGGAGTACCTTGGTCATGTTCTTAAGAAAAGGTGGCCACTAATATGCACAAGACATAAGCAATGTTGCCCTGGCTACAAGATAGAATTGATATGGAGTTGTGTGGTTGCTAGGGCTAATGGGGGCACTGTCAGCTCTTTTGTTTGTCAGGCATTATTGAATCATCTCTGAGCCACAAGCTAATCTCCTCAAAGGAAGGTGTTACATTGAGAGTTTGGAACAGAGAAGTAGCTTCAGATTTTCAATGATTGAAGGACAATCCAGATTTCATAAGGCTTTTGAAGTCAATGGAAACTTGAGATGATGGTAGAGGTTCCATTCACATGCAAAGTGAGCACCTGATAGCTTACCTGGCCAAGTCTCTCAATTCAATGCATCAAAAGTTGTCTAAGAGAGAATTTCTGGCATTGATCATGGTCGTATACTGCTGGAGACCATACCTACAGAAAGTGGAATTTGTAATCAGGACCTGCAGCCATGTTATTTATAAGACCATCAGTTTCTGTATGACATGCCCGCAAAACGCAATGACAAAACCTAATGAATTGCAGTTCATGATCCAGTGCAAGAAGGTCAAGAGAAAGGAATGCAGATCAATGCCTTGGCTTGTACTTCCTCATCACTTACAGTCCAAGCTGTCTCAGAATGCCAACAGAGTTTGTCTTCAGGAGGTAATCAGTTCTGAACAATTGTCCTTTGTTTTCTTCAGGAAGATGTTAAAACTGGTACATAAGTAACGATGAGGACTAACACATCTACAACCCTTTCAAGCTACCAATGGGTAGGTCAGGATGATTTGGGAGGAGCGAGAAACCTGAAATTATTATGTCTCTTTGATGAAATATCTGGGTTGAAATTCAATTTTCATAAGATTTAGACGTTTTGTTTCTGAAGTTCTGTTGAGAAGCAAGATAGCTCTTTCAACGCCTCATGGACCAAATGGAAAAAGCTGATGATGAGGTAAAAGGCGACCTATCCTTTTCGTTTCGATAAAGAATGATAGCTTTCAGCCTGATCCAGATGTGTCACTAAACTAGGCGTTTTTAATTGTGAATTTGTGTGGGTGATGCGGATTTTAGTACAGCAAGGTAGGCTGTTGACCTGTTGTAAAGGCATTTCCTGCTGAATGCTTG]


>consensus_2546#1 CGGGTCCAACCGATTACGGGGCACGCGCGGCGGCGGCGGCGGAGTGACCGGCGCGACGCC GCAGGCCTGCAATGTGGGCATTCCTGATCTCCCCGCCGCTCCGGGATGCCCCCCCCCCTC CGTCGCCGGTGCCGTTGAGCGTGCTTGCCCCGCGGTGAGATTGTTTGGTTCGGCCGCGGC TAGGGTTCGGGTTGTTTGGCTTGGCATTTTTCTTTTGCTCTTTGGTGGATCCCAAATAAA TGGCTTTTTGTGAGCAAGCGTTTGGAAAACCATAGCCCTGCTGGTGAGATGTGATTTTCA TGAATTAGGTTTGCCTTGTACAAATAAATGGATTACAGTGGTGGTTGAATATCTCAACAC TAAATATTAGAAATGCATGACTTACAGAACTGGCTTTGGCAGTATGTAAGATTCCAACAA CGAGAGTTGGGAATGAAAGAAGGAAGTGACCCTGCCAACTACTACAAGATTTTGAAGATC TCTTGAAAGAGCCTAAGAAATTACCACTGAAATAAAATATGATTATGCCATTCCTTGTGG TCCTGGCACTGCACCTGTAAATTCTAATCCTTACCAGCATTGATAACTGCACAAAGACAA CATTGAGGAAATGGCGCACCATATGTTTTTTCCTCAAAACTGCAACACATGCTTGCTAAC TGTGTTATTGAACTGGGTGCAAGCCCTTTCAAGTTACCTTTAGTCTTAGTGAAGATTGTG GAAGGGTGGGAGTTTCAAATGTCTAATGAATTCAGTTCTGCAGCTTTATCTTATTAAGTT CACTATTGTGTTCTTGGATGACGTCTTGGTATTACAGTCTTTCAAGGCACATGTGAAAAA CTTGGAGCATGTCCTGACCACACTGTGGCAACATCAACTCTGTGTTAGACGCAAGAAATG TAGTTTTGCACAGAGAAGACTGGAGTACCTTGGTCATGTTCTTAAGAAAAGGTGGCCACT AATATGCACAAGACATAAGCAATGTTGCCCTGGCTACAAGATAGAATTGATATGGAGTTG TGTGGTTGCTAGGGCTAATGGGGGCACTGTCAGCTCTTTTGTTTGTCAGGCATTATTGAA TCATCTCTGAGCCACAAGCTAATCTCCTCAAAGGAAGGTGTTACATTGAGAGTTTGGAAC AGAGAAGTAGCTTCAGATTTTCAATGATTGAAGGACAATCCAGATTTCATAAGGCTTTTG AAGTCAATGGAAACTTGAGATGATGGTAGAGGTTCCATTCACATGCAAAGTGAGCACCTG ATAGCTTACCTGGCCAAGTCTCTCAATTCAATGCATCAAAAGTTGTCTAAGAGAGAATTT CTGGCATTGATCATGGTCGTATACTGCTGGAGACCATACCTACAGAAAGTGGAATTTGTA ATCAGGACCTGCAGCCATGTTATTTATAAGACCATCAGTTTCTGTATGACATGCCCGCAA AACGCAATGACAAAACCTAATGAATTGCAGTTCATGATCCAGTGCAAGAAGGTCAAGAGA AAGGAATGCAGATCAATGCCTTGGCTTGTACTTCCTCATCACTTACAGTCCAAGCTGTCT CAGAATGCCAACAGAGTTTGTCTTCAGGAGGTAATCAGTTCTGAACAATTGTCCTTTGTT TTCTTCAGGAAGATGTTAAAACTGGTACATAAGTAACGATGAGGACTAACACATCTACAA CCCTTTCAAGCTACCAATGGGTAGGTCAGGATGATTTGGGAGGAGCGAGAAACCTGAAAT TATTATGTCTCTTTGATGAAATATCTGGGTTGAAATTCAATTTTCATAAGATTTAGACGT TTTGTTTCTGAAGTTCTGTTGAGAAGCAAGATAGCTCTTTCAACGCCTCATGGACCAAAT GGAAAAAGCTGATGATGAGGTAAAAGGCGACCTATCCTTTTCGTTTCGATAAAGAATGAT AGCTTTCAGCCTGATCCAGATGTGTCACTAAACTAGGCGTTTTTAATTGTGAATTTGTGT GGGTGATGCGGATTTTAGTACAGCAAGGTAGGCTGTTGACCTGTTGTAAAGGCATTTCCT GCTGAATGCTTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2546#0      AGAAGGCACGGGTCCAACCGATTACGGGGCACGCGCGGCGGCGGCGGCGGAGTGACCGGC 60
consensus_2546#1      --------CGGGTCCAACCGATTACGGGGCACGCGCGGCGGCGGCGGCGGAGTGACCGGC 52
                              ****************************************************

consensus_2546#0      GCGACGCCGCAGGCCTGCAATGTGGGCATTCCTGATCTCCCCGCCGCTCCGGGATGCCCC 120
consensus_2546#1      GCGACGCCGCAGGCCTGCAATGTGGGCATTCCTGATCTCCCCGCCGCTCCGGGATGCCCC 112
                      ************************************************************

consensus_2546#0      CCCCCCCTCCGTCGCCGGTGCCGTTGAGCGTGCTTGCCCCGCGGTGAGATTGTTTGGTTC 180
consensus_2546#1      CCCCCC-TCCGTCGCCGGTGCCGTTGAGCGTGCTTGCCCCGCGGTGAGATTGTTTGGTTC 171
                      ****** *****************************************************

consensus_2546#0      GGCCGCGGCTAGGGTTCGGTTTTTCATAGGTTGTTTGGCTTGGCATTTTTCTTTTGCTCT 240
consensus_2546#1      GGCCGCGGCTAGGGTTCGG----------GTTGTTTGGCTTGGCATTTTTCTTTTGCTCT 221
                      *******************          *******************************

consensus_2546#0      TTGGTGGATCCCAAATAAATGGCTTTTTGTGAGCAAGCGTTTGGAAAACCATAGCCCTGC 300
consensus_2546#1      TTGGTGGATCCCAAATAAATGGCTTTTTGTGAGCAAGCGTTTGGAAAACCATAGCCCTGC 281
                      ************************************************************

consensus_2546#0      TGGTGAGATGTGATTTTCATGAA------------------------------------- 323
consensus_2546#1      TGGTGAGATGTGATTTTCATGAATTAGGTTTGCCTTGTACAAATAAATGGATTACAGTGG 341
                      ***********************                                     

consensus_2546#0      ------------------------------------------------CTGGCTTTGGCA 335
consensus_2546#1      TGGTTGAATATCTCAACACTAAATATTAGAAATGCATGACTTACAGAACTGGCTTTGGCA 401
                                                                      ************

consensus_2546#0      GTATGTAAGATTCCAACAACGAGAGTTGGGAATGAAAGAAGGAAGTGACCCTGCCAACTA 395
consensus_2546#1      GTATGTAAGATTCCAACAACGAGAGTTGGGAATGAAAGAAGGAAGTGACCCTGCCAACTA 461
                      ************************************************************

consensus_2546#0      CTACAAGATTTTGAAGGTCTCTTGAAAGAGCCTAAGAAATTACCACTGAAATAAAATATG 455
consensus_2546#1      CTACAAGATTTTGAAGATCTCTTGAAAGAGCCTAAGAAATTACCACTGAAATAAAATATG 521
                      **************** *******************************************

consensus_2546#0      ATTATGCCATTCCTTGTGGTCCTGGCACTGCACCTGTAAATTCTAATCCTTACCAGCATT 515
consensus_2546#1      ATTATGCCATTCCTTGTGGTCCTGGCACTGCACCTGTAAATTCTAATCCTTACCAGCATT 581
                      ************************************************************

consensus_2546#0      GATAACTGCACAAAGACAACATTGAGGAAATGGCGCACCATATGTTTTTTCCTCAAAACT 575
consensus_2546#1      GATAACTGCACAAAGACAACATTGAGGAAATGGCGCACCATATGTTTTTTCCTCAAAACT 641
                      ************************************************************

consensus_2546#0      GCAACACATGCTTGCTAACTGTGTTATTGAACTGGGTGCAAGCCCTTTCAAGTTACCTTT 635
consensus_2546#1      GCAACACATGCTTGCTAACTGTGTTATTGAACTGGGTGCAAGCCCTTTCAAGTTACCTTT 701
                      ************************************************************

consensus_2546#0      AGTCTTAGTGAAGATTGTGGAAGGGTGGGAGTTTCAAATGTCTAATGAATTCAGTTCTGC 695
consensus_2546#1      AGTCTTAGTGAAGATTGTGGAAGGGTGGGAGTTTCAAATGTCTAATGAATTCAGTTCTGC 761
                      ************************************************************

consensus_2546#0      AGCTTTATCTTATTAAGTTCACTATTGTGTTCTTGGATGACGTCTTGGTATTACAGTCTT 755
consensus_2546#1      AGCTTTATCTTATTAAGTTCACTATTGTGTTCTTGGATGACGTCTTGGTATTACAGTCTT 821
                      ************************************************************

consensus_2546#0      TCAAGGCACATGTGAAAAACTTGGAGCATGTCCTGACCACACCGTGGCAACATCAACTCT 815
consensus_2546#1      TCAAGGCACATGTGAAAAACTTGGAGCATGTCCTGACCACACTGTGGCAACATCAACTCT 881
                      ****************************************** *****************

consensus_2546#0      GTGTTAGACGCA-GAAATGTAGTTTTGCACAGAGAAGACTGGAGTACCTTGGTCATGTTC 874
consensus_2546#1      GTGTTAGACGCAAGAAATGTAGTTTTGCACAGAGAAGACTGGAGTACCTTGGTCATGTTC 941
                      ************ ***********************************************

consensus_2546#0      TTAAGAAAAGGTGGCCACTAATATGCACAAGACATAAGCAATGTTGCCCTGGCTACAAGA 934
consensus_2546#1      TTAAGAAAAGGTGGCCACTAATATGCACAAGACATAAGCAATGTTGCCCTGGCTACAAGA 1001
                      ************************************************************

consensus_2546#0      TAGAATTGATATGGAGTTGTGTGGTTGCTAGGGCTAATGGGGGCACTGTCAGCTCTTTTG 994
consensus_2546#1      TAGAATTGATATGGAGTTGTGTGGTTGCTAGGGCTAATGGGGGCACTGTCAGCTCTTTTG 1061
                      ************************************************************

consensus_2546#0      TTTGTCAGGCATTATTGAATCATCTCTGAGCCACAAGCTAATCTCCTCAAAGGAAGGTGT 1054
consensus_2546#1      TTTGTCAGGCATTATTGAATCATCTCTGAGCCACAAGCTAATCTCCTCAAAGGAAGGTGT 1121
                      ************************************************************

consensus_2546#0      TACATTGAGAGTTTGGAACAGAGAAGTAGCTTCAGATTTTCAATGATTGAAGGACAATCC 1114
consensus_2546#1      TACATTGAGAGTTTGGAACAGAGAAGTAGCTTCAGATTTTCAATGATTGAAGGACAATCC 1181
                      ************************************************************

consensus_2546#0      AGATTTCATAAGGCTTTTGAAGTCAATGGAAACTTGAGATGATGGTAGAGGTTCCATTCA 1174
consensus_2546#1      AGATTTCATAAGGCTTTTGAAGTCAATGGAAACTTGAGATGATGGTAGAGGTTCCATTCA 1241
                      ************************************************************

consensus_2546#0      CATGCAAAGTGAGCACCTGATAGCTTACCTGGCCAAGTCTCTCAATTCAATGCATCAAAA 1234
consensus_2546#1      CATGCAAAGTGAGCACCTGATAGCTTACCTGGCCAAGTCTCTCAATTCAATGCATCAAAA 1301
                      ************************************************************

consensus_2546#0      GTTGTCTAAGAGAGAATTTCTGGCATTGATCATGGTCGTATACTGCTGGAGACCATACCT 1294
consensus_2546#1      GTTGTCTAAGAGAGAATTTCTGGCATTGATCATGGTCGTATACTGCTGGAGACCATACCT 1361
                      ************************************************************

consensus_2546#0      ACAGAAAGTGGAATTTGTAATCAGGACCTGCAGCCATGTTATTTATAAGACCATCAGTTT 1354
consensus_2546#1      ACAGAAAGTGGAATTTGTAATCAGGACCTGCAGCCATGTTATTTATAAGACCATCAGTTT 1421
                      ************************************************************

consensus_2546#0      CTGTATGACATGCCCGCAAAACGCAATGACAAAACCTAATGAATTGCAGTTCATGATCCA 1414
consensus_2546#1      CTGTATGACATGCCCGCAAAACGCAATGACAAAACCTAATGAATTGCAGTTCATGATCCA 1481
                      ************************************************************

consensus_2546#0      GTGCAAGAAGGTCGAGAGAAAGGAATGCAGATCAATGCCTTGGCTTGTACTTCCTCATCA 1474
consensus_2546#1      GTGCAAGAAGGTCAAGAGAAAGGAATGCAGATCAATGCCTTGGCTTGTACTTCCTCATCA 1541
                      ************* **********************************************

consensus_2546#0      CTTACAGTCCAAGCTGTCTCAGAATGCCAACAGAGTTTGTCTTCAGGAGAGAACAGCAGC 1534
consensus_2546#1      CTTACAGTCCAAGCTGTCTCAGAATGCCAACAGAGTTTGTCTTCAGGAGGTAAT--CAGT 1599
                      *************************************************  **   *** 

consensus_2546#0      TTAGGCATCAATCCTCACTACATCCATTCCCGTGGTTGCGTCTTTTATCGTGGACATCAC 1594
consensus_2546#1      TCTG--AACAATTGTCCTTTGTTTTCTTCAGGAAGATG------TTAAAACTGGTA-CAT 1650
                      *  *  * ****  **  *   *   ***  *  * **      ***     *  * ** 

consensus_2546#0      AGGTTGCACCATTTCTTAAGAAGAATGATACTTTTGTAGCAGCACTAAAGAAGGAACTGT 1654
consensus_2546#1      AAGTAACG---------ATGAGGACTAACACATCTACAACCCTTTCAAGCTACCAATGGG 1701
                      * **  *          * ** ** * * ** * *  * *      **   *  **  * 

consensus_2546#0      CTGAACACATTGCTGATGTGCATGTTCAAAACGATTTTCTCGATGGCATGTTCACTTTCT 1714
consensus_2546#1      TAGGTCAG---GATGATTTGGGAG----GAGCGA----------GAAACCTGAAATTATT 1744
                        *  **    * **** **   *     * ***          *  *  *  * **  *

consensus_2546#0      GTGGTGCTACAATGGCACCTGCACCTCTAAATAGAGCTCCCATAAATGTGTAAATGATGG 1774
consensus_2546#1      ATGTCTCTTTGATGAAATATCTGGGTTGAAATTCAATTTTCATAAG-ATTTAGACGTTTT 1803
                       **   **   ***  *  *     *  ****  *  *  *****   * ** * * *  

consensus_2546#0      GATACACGATTGTGCCACAGGCAAAGGAAAGAGATTGAGAGGTTTTGAGAAGGGGCCCAG 1834
consensus_2546#1      GTTTCTGAA--GTTCTGTTGAGAAGCAAGATAGCTC------TTTCAA---------CGC 1846
                      * * *   *  ** *    *  **   * * ** *       ***  *         *  

consensus_2546#0      TTCATCGAGATTGTGGCAATGGTGGTACTCCAAGCCAAAAAAAGAAAAAAAATATTGGAG 1894
consensus_2546#1      CTCATGGACCAAATGGAAAAAGCTG-ATGATGAGGTAAAAGGCGACCTATCCTTTTCG-- 1903
                       **** **     *** **  *  * *     **  ****   **   *   * ** *  

consensus_2546#0      GCCTCAGGTCCGAAGAATTGAAGGATGTCAGAATGTGAGAAGTGTGAAGCAGATAAGGGT 1954
consensus_2546#1      --TTTCGAT---AAAGAATGATAGCTTTCAGCCTGATCCAGATGTGTCACTAAACTAGGC 1958
                         *  * *   **  * ***  * * ****  **    *  ****   *  *    ** 

consensus_2546#0      TTTTTCTTCTTTTTTTTTTCTCTTTTGGTGTGTAATCTGTTG-AGGATGGT-GCCTGATG 2012
consensus_2546#1      GTTTTTAATTGTGAATTTGTGTGGGTGATGCGGATTTTAGTACAGCAAGGTAGGCTGTTG 2018
                       ****    * *   ***       ** ** * * * *  *  ** * *** * *** **

consensus_2546#0      ATAGAGTAGTTCAAGCTTTGCAAGTGGGTTGTATTTTCCTGTTCCCAGAATCTAATAGAA 2072
consensus_2546#1      ACCT-GTTGTAAAGGCATTTCCTGCTGAATGCTTG------------------------- 2052
                      *    ** **  * ** ** *  *  *  **  *                          

consensus_2546#0      ACTGA 2077
consensus_2546#1      -----
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)