Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2591 cluster # 2591       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2591#0 length = 1463 sequences # 2  

consensusID : consensus_2591#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1463
fasta sequence
                              [GCCATCGATGATCGATCTATACTTAGTGAACAGAACAGGAAGACGATCACTCATCTAATACCGAATTATTAGCTGGAGAGATCGATTCAAGGCTATTGTCTGGATCGAATGATTTGTCCATGGAGTGTAGCGGCGGCGGCGGTGGCGCTGCTGCTTCTGTCGCCGGGGGAGAATCAGATGGTCCGAGTGTCAGCACAGCCGACGAAGACGAGGTGCGCCGCCGGCGTCGTCGACACCTGCGGCGACGTGGGCGTGCCGTACCTGTTCGGCATCGACGGCGGTAGCTGCAGCTTCCTCCCGGGCTTCAACCTCACCTGCGACCGCACCAAGCAGCCACACAGGCTGTTCCTCGGCGACGGCTCCCACCTCCAGGTCACCGAGATCTCCCTGGCCAACTACACGGTGCGCGTCCTCAACGGCGTCGGCACCGTGAACTTCACCTTTGCGGGGCACAACGATTCCACGGCGAAGTGGGCCGGAGTCAGCGTCGGCCAAGACGACGGGCCGTACATCGTCTCAGAGGAGCACAACCAGCTGGTGGTGACGGGGTGCAACATCATGGCCTCCCTGCTCGGGAACAGCGGCAGCAACGTCATCATCGGCTGCTCCTCCTTCTGCTCCATCACCGACTGGTGGGGCGCCGACCCAATAGTGCACTCCGGCGCCGGCGGCGCGTGCTCCGGCCTCGGCTGCTGCGACGTCAACATCACCATCGGCCGGCCCTCCTACGAACTGCAGCTCAGGTGGCTCGACTGGGACCACAACTACGACGACCTCCTGCCCATCGCCGTGCGCATCGCGGAGCGCGGTTGGTTCGACGGCATGTCGACCAAGCTTCTCAGGAAAAACAGCCGCAGCGCTGTTCCCGTGCCCGTGGTGCTGGAGTGGGCCGTGGCGTCTGTTCACAAGCCGCCCACTCCCGTAGACGTGAACAGCACGTGCCCCAAGGACCCGGCGAGAAGCGAGTGCCGTAGCAGCAACAGCTTCTGCCGCAACATCGCCAACATGTACCGCAGCGGTTACGTGTGCAAGTGCGACGACGGGTACCAGGGCAACCCTTACCTCACCGGCGGCTGCCAAGATATCGACGAATGTTCGCTGCCGGGCAAGTGCTTCGGTGAGTGTACAAACACGCCAGGAAACTACAGTTGCCGTTGTCCGCGTGGTGCGCGTGGCAATCCCTACACCAAAGATGGCTGCATCAAGTTTCCTCTAGGTCCGGGTCTACAGAGAAAATGGATTGGTGCGGGTTGGATTTGCTTTGGTGTGAGTCCGAATGGTCCTTTCTCTCGTCTTCTTGGCATGTTGATGAGAAACCAACGTGGTGGGAGGGACGGCATCACGTTGAACCGCAACGCTAGTGATGCTGGCGCCAAGAGAAATGTCTATTTGTAAAATAAGTTTCTCTAAGATTCTATTTGTAAAAAAGTTTTAAAAAGATCTAAAATATGAACTGCTCTAAT]

[+] EMBL CB675895             [GCCATCGATGATCGATCTATACTTAGTGAACAGAACAGGAAGACGATCACTCATCTAATACCGAATTATTAGCTGGAGAGATCGATTCAAGGCTATTGTCTGGATCGAATGATTTGTCCATGGAGTGTAGCGGCGGCGGCGGTGGCGCTGCTGCTTCTGTCGCCGGGGGAGAATCAGATGGTCCGAGTGTCAGCACAGCCGACGAAGACGAGGTGCGCCGCCGGCGTCGTCGACACCTGCGGCGACGTGGGCGTGCCGTACCTGTTCGGCATCGACGGCGGTAGCTGCAGCTTCCTCCCGGGCTTCAACCTCACCTGCGACCGCACCAAGCAGCCACACAGGCTGTTCCTCGGCGACGGCTCCCACCTCCAGGTCACCGAGATCTCCCTGGCCAACTACACGGTGCGCGTCCTCAACGGCGTCGGCACCGTGAACTTCACCTTTGCGGGGCACAACGATTCCACGGCGAAGTGGGCCGGAGTCAGCGTCGGCCAAGACGACGGGCCGTACATCGTCTCAGAGGAGCACAACCAGCTGGTGGTGACGGGGTGCAACATCATGGCCTCCCTGCTCGGGAACAGCGGCAGCAACGTCATCATCGGCTGCTCCTCCTTCTGCTCCATCACCGACTGGTGGGGCGCCGACCCAATAGTGCACTCCGGCGCCGGCGGCGCGTGCTCCGGCCTCGGCTGCTGCGACGTCAACATCACCATCGGCCGGCCCTCCTACGAACTGCAGCTCAGGTGGCTCGACTGGGACCACAACTACGACGACCTCCTGCCCATCGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK066290             [                                                        AATACCGAATTATTAGCTGGAGAGATCGATTCAAGGCTATTGTCTGGATCGAATGATTTGTCCATGGAGTGTAGCGGCGGCGGCGGTGGCGCTGCTGCTTCTGTCGCCGGGGGAGAATCAGATGGTCCGAGTGTCAGCACAGCCGACGAAGACGAGGTGCGCCGCCGGCGTCGTCGACACCTGCGGCGACGTGGGCGTGCCGTACCTGTTCGGCATCGACGGCGGTAGCTGCAGCTTCCTCCCGGGCTTCAACCTCACCTGCGACCGCACCAAGCAGCCACACAGGCTGTTCCTCGGCGACGGCTCCCACCTCCAGGTCACCGAGATCTCCCTGGCCAACTACACGGTGCGCGTCCTCAACGGCGTCGGCACCGTGAACTTCACCTTTGCGGGGCACAACGATTCCACGGCGAAGTGGGCCGGAGTCAGCGTCGGCCAAGACGACGGGCCGTACATCGTCTCAGAGGAGCACAACCAGCTGGTGGTGACGGGGTGCAACATCATGGCCTCCCTGCTCGGGAACAGCGGCAGCAACGTCATCATCGGCTGCTCCTCCTTCTGCTCCATCACCGACTGGTGGGGCGCCGACCCAATAGTGCACTCCGGCGCCGGCGGCGCGTGCTCCGGCCTCGGCTGCTGCGACGTCAACATCACCATCGGCCGGCCCTCCTACGAACTGCAGCTCAGGTGGCTCGACTGGGACCACAACTACGACGACCTCCTGCCCATCGCCGTGCGCATCGCGGAGCGCGGTTGGTTCGACGGCATGTCGACCAAGCTTCTCAGGAAAAACAGCCGCAGCGCTGTTCCCGTGCCCGTGGTGCTGGAGTGGGCCGTGGCGTCTGTTCACAAGCCGCCCACTCCCGTAGACGTGAACAGCACGTGCCCCAAGGACCCGGCGAGAAGCGAGTGCCGTAGCAGCAACAGCTTCTGCCGCAACATCGCCAACATGTACCGCAGCGGTTACGTGTGCAAGTGCGACGACGGGTACCAGGGCAACCCTTACCTCACCGGCGGCTGCCAAGATATCGACGAATGTTCGCTGCCGGGCAAGTGCTTCGGTGAGTGTACAAACACGCCAGGAAACTACAGTTGCCGTTGTCCGCGTGGTGCGCGTGGCAATCCCTACACCAAAGATGGCTGCATCAAGTTTCCTCTAGGTCCGGGTCTACAGAGAAAATGGATTGGTGCGGGTTGGATTTGCTTTGGTGTGAGTCCGAATGGTCCTTTCTCTCGTCTTCTTGGCATGTTGATGAGAAACCAACGTGGTGGGAGGGACGGCATCACGTTGAACCGCAACGCTAGTGATGCTGGCGCCAAGAGAAATGTCTATTTGTAAAATAAGTTTCTCTAAGATTCTATTTGTAAAAAAGTTTTAAAAAGATCTAAAATATGAACTGCTCTAAT]


>consensus_2591#0 GCCATCGATGATCGATCTATACTTAGTGAACAGAACAGGAAGACGATCACTCATCTAATA CCGAATTATTAGCTGGAGAGATCGATTCAAGGCTATTGTCTGGATCGAATGATTTGTCCA TGGAGTGTAGCGGCGGCGGCGGTGGCGCTGCTGCTTCTGTCGCCGGGGGAGAATCAGATG GTCCGAGTGTCAGCACAGCCGACGAAGACGAGGTGCGCCGCCGGCGTCGTCGACACCTGC GGCGACGTGGGCGTGCCGTACCTGTTCGGCATCGACGGCGGTAGCTGCAGCTTCCTCCCG GGCTTCAACCTCACCTGCGACCGCACCAAGCAGCCACACAGGCTGTTCCTCGGCGACGGC TCCCACCTCCAGGTCACCGAGATCTCCCTGGCCAACTACACGGTGCGCGTCCTCAACGGC GTCGGCACCGTGAACTTCACCTTTGCGGGGCACAACGATTCCACGGCGAAGTGGGCCGGA GTCAGCGTCGGCCAAGACGACGGGCCGTACATCGTCTCAGAGGAGCACAACCAGCTGGTG GTGACGGGGTGCAACATCATGGCCTCCCTGCTCGGGAACAGCGGCAGCAACGTCATCATC GGCTGCTCCTCCTTCTGCTCCATCACCGACTGGTGGGGCGCCGACCCAATAGTGCACTCC GGCGCCGGCGGCGCGTGCTCCGGCCTCGGCTGCTGCGACGTCAACATCACCATCGGCCGG CCCTCCTACGAACTGCAGCTCAGGTGGCTCGACTGGGACCACAACTACGACGACCTCCTG CCCATCGCCGTGCGCATCGCGGAGCGCGGTTGGTTCGACGGCATGTCGACCAAGCTTCTC AGGAAAAACAGCCGCAGCGCTGTTCCCGTGCCCGTGGTGCTGGAGTGGGCCGTGGCGTCT GTTCACAAGCCGCCCACTCCCGTAGACGTGAACAGCACGTGCCCCAAGGACCCGGCGAGA AGCGAGTGCCGTAGCAGCAACAGCTTCTGCCGCAACATCGCCAACATGTACCGCAGCGGT TACGTGTGCAAGTGCGACGACGGGTACCAGGGCAACCCTTACCTCACCGGCGGCTGCCAA GATATCGACGAATGTTCGCTGCCGGGCAAGTGCTTCGGTGAGTGTACAAACACGCCAGGA AACTACAGTTGCCGTTGTCCGCGTGGTGCGCGTGGCAATCCCTACACCAAAGATGGCTGC ATCAAGTTTCCTCTAGGTCCGGGTCTACAGAGAAAATGGATTGGTGCGGGTTGGATTTGC TTTGGTGTGAGTCCGAATGGTCCTTTCTCTCGTCTTCTTGGCATGTTGATGAGAAACCAA CGTGGTGGGAGGGACGGCATCACGTTGAACCGCAACGCTAGTGATGCTGGCGCCAAGAGA AATGTCTATTTGTAAAATAAGTTTCTCTAAGATTCTATTTGTAAAAAAGTTTTAAAAAGA TCTAAAATATGAACTGCTCTAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)