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Oryza sativa
cluster # 2713 cluster # 2713       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2713#0 length = 1524 sequences # 2  

consensusID : consensus_2713#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1524
fasta sequence
                              [GCTCNAACTCTTTAGTATTCACCATTTCCAAGGGTGATGCATCGAGTACAAGGCCCTGGTGTGGACGGTTATCCACAACCATGTTAAGGTCATGCTTTGATGCTTCGATGACTTTCAGCCCAATCCTCTCTGCCAGTTGCAAAACTTTCTNAATCCCTTTCTTGTCCTTCTTCTTCTTGTTGCTCACACTAAAATCCATCCCTTCCTGAATATACAGCGCATAGAAGTCCCTCCTCTCAGCCATGAGAGCTGCAAGCACAGGGCCAACCCCATAAACCCCCTGTCCAACCATTTTTGGNACTGTCGATTCCCCTGCCTCCTTCCATGTCTTCCTCCCCCAGTTCTCCTGCCTGCTCCACTGCCTAACCTCCGGCTTGTCAAATCTCTCCCCTCTAAATCTCTCACCACGGGACCCTCTATCCCTCGGCACCATCCGCCGATACTTGTCCTTGATCCTGCCCCACTTCGGATTGTCAATCGAGCCATTATCCTCTTCCTCTCTAATTATCTCCCTGCCCGAACCACGATCCGTCAATACCTCACCTCGCGGGCTTTGGTCGCCTCTGGAGAAAAACTTCTCCGCGGAGGTCTCCCACGAGGAGGAGCGGCCGGCGCTAGCCCTCGCCGCGGGGGCGGCGCCGCCATCGCGGCTCGCGGCGGCGAGCCAAGGGAGCGCGCTCCCGCCGTCGGGCGATGCGGTACCATCAGGTGCGGTGGAGAACGAAACCCTACCTCCCAGCCCCAGCTGCGAGGGGCCGCCCGGGCTAACCGCGGCTCTGGCGCTCGCACGGTTGGTGACGGTGGTTACCGGATGAAGCGCGGGCGAGGAGGCCGTGGGCCTGGAGAAGCACGCTGCGCGGAGAAGGCCGGCGAGGAGGATGCGTCGCGGCGAGGACGCCGCCGCGAGGAGCGGGAGGGGCTGGGATTTGGTGAGGCCGGAGTGGAGCATAGCGCGGGGCGGGGGGAGTAGGGTTTTGGATGAGGCTGGAGCCGAGGGGGTTTTGGGCGGCGCGCGCCACCCGTTCGACAAAATGCCGCAACGAGCCGACGACGACGATGCGTGGAAAGTCACGGTTTTGCAGTTCGCTTCATCTCTGGCGACCAATTCATCCAACGGCACACGTGCATCTTTCTTCCTTTACTCGCACACCGTGCGGCCCAGTTCACCTACAGCAGGCCATCGGCTAGCCCATCAGAATTCAGAAAGAGGAGAGAAGGGACTTCTGTATTTTGTGGACCCCTTTAAAACTACAGTACTGTAAGGGCAATTACTATAATGCTTCATATGCTACCTCTAGAAATAACACATAGAATTAGGTGATGAGGTGGAGGAGAGAAGTGAGGTGAGAGATGATAAAACCACCCCTAAATGAAGAGGTGGCTTCCACACAAACTCCAAGAAGGATGTGAGAGTACTAAAGACATTGATATTTGTCTATTAGGGACAGTGGCGGACCCAGAAAAATCATATTGGGTGTGCCCACGCTAGGATGTATAATACCATTCTTTAACTAAAACATGTCA]

[-] EMBL AU062756             [GCTCNAACTCTTTAGTATTCACCATTTCCAAGGGTGATGCATCGAGTACAAGGCCCTGGTGTGGACGGTTATCCACAACCATGTTAAGGTCATGCTTTGATGCTTCGATGACTTTCAGCCCAATCCTCTCTGCCAGTTGCAAAACTTTCTNAATCCCTTTCTTGTCCTTCTTCTTCTTGTTGCTCACACTAAAATCCATCCCTTCCTGAATATACAGCGCATAGAAGTCCCTCCTCTCAGCCATGAGAGCTGCAAGCACAGGGCCAACCCCATAAACCCCCTGTCCAACCATTTTTGGNACTGTCGATTCCCCTGCCTCCTTCCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK110930             [                                                                                                                             CTCTCTGCCAGTTGCAACACTTTCTCAATCCCTTTCTTGTCCTTCTTCTTCTTGTTGCTCACACTAAAATCCATCCCTTCCTGAATATACAGCGCATAGAAGTCCCTCCTCTCAGCCATGAGAGCTGCAAGCACAGGGCCAACCCCATAAACCCCCTGTCCAACCATTTTTGGCACTGTCGATTCCCCTGCCTCCTTCCATGTCTTCCTCCCCCAGTTCTCCTGCCTGCTCCACTGCCTAACCTCCGGCTTGTCAAATCTCTCCCCTCTAAATCTCTCACCACGGGACCCTCTATCCCTCGGCACCATCCGCCGATACTTGTCCTTGATCCTGCCCCACTTCGGATTGTCAATCGAGCCATTATCCTCTTCCTCTCTAATTATCTCCCTGCCCGAACCACGATCCGTCAATACCTCACCTCGCGGGCTTTGGTCGCCTCTGGAGAAAAACTTCTCCGCGGAGGTCTCCCACGAGGAGGAGCGGCCGGCGCTAGCCCTCGCCGCGGGGGCGGCGCCGCCATCGCGGCTCGCGGCGGCGAGCCAAGGGAGCGCGCTCCCGCCGTCGGGCGATGCGGTACCATCAGGTGCGGTGGAGAACGAAACCCTACCTCCCAGCCCCAGCTGCGAGGGGCCGCCCGGGCTAACCGCGGCTCTGGCGCTCGCACGGTTGGTGACGGTGGTTACCGGATGAAGCGCGGGCGAGGAGGCCGTGGGCCTGGAGAAGCACGCTGCGCGGAGAAGGCCGGCGAGGAGGATGCGTCGCGGCGAGGACGCCGCCGCGAGGAGCGGGAGGGGCTGGGATTTGGTGAGGCCGGAGTGGAGCATAGCGCGGGGCGGGGGGAGTAGGGTTTTGGATGAGGCTGGAGCCGAGGGGGTTTTGGGCGGCGCGCGCCACCCGTTCGACAAAATGCCGCAACGAGCCGACGACGACGATGCGTGGAAAGTCACGGTTTTGCAGTTCGCTTCATCTCTGGCGACCAATTCATCCAACGGCACACGTGCATCTTTCTTCCTTTACTCGCACACCGTGCGGCCCAGTTCACCTACAGCAGGCCATCGGCTAGCCCATCAGAATTCAGAAAGAGGAGAGAAGGGACTTCTGTATTTTGTGGACCCCTTTAAAACTACAGTACTGTAAGGGCAATTACTATAATGCTTCATATGCTACCTCTAGAAATAACACATAGAATTAGGTGATGAGGTGGAGGAGAGAAGTGAGGTGAGAGATGATAAAACCACCCCTAAATGAAGAGGTGGCTTCCACACAAACTCCAAGAAGGATGTGAGAGTACTAAAGACATTGATATTTGTCTATTAGGGACAGTGGCGGACCCAGAAAAATCATATTGGGTGTGCCCACGCTAGGATGTATAATACCATTCTTTAACTAAAACATGTCA]


>consensus_2713#0 GCTCNAACTCTTTAGTATTCACCATTTCCAAGGGTGATGCATCGAGTACAAGGCCCTGGT GTGGACGGTTATCCACAACCATGTTAAGGTCATGCTTTGATGCTTCGATGACTTTCAGCC CAATCCTCTCTGCCAGTTGCAAAACTTTCTNAATCCCTTTCTTGTCCTTCTTCTTCTTGT TGCTCACACTAAAATCCATCCCTTCCTGAATATACAGCGCATAGAAGTCCCTCCTCTCAG CCATGAGAGCTGCAAGCACAGGGCCAACCCCATAAACCCCCTGTCCAACCATTTTTGGNA CTGTCGATTCCCCTGCCTCCTTCCATGTCTTCCTCCCCCAGTTCTCCTGCCTGCTCCACT GCCTAACCTCCGGCTTGTCAAATCTCTCCCCTCTAAATCTCTCACCACGGGACCCTCTAT CCCTCGGCACCATCCGCCGATACTTGTCCTTGATCCTGCCCCACTTCGGATTGTCAATCG AGCCATTATCCTCTTCCTCTCTAATTATCTCCCTGCCCGAACCACGATCCGTCAATACCT CACCTCGCGGGCTTTGGTCGCCTCTGGAGAAAAACTTCTCCGCGGAGGTCTCCCACGAGG AGGAGCGGCCGGCGCTAGCCCTCGCCGCGGGGGCGGCGCCGCCATCGCGGCTCGCGGCGG CGAGCCAAGGGAGCGCGCTCCCGCCGTCGGGCGATGCGGTACCATCAGGTGCGGTGGAGA ACGAAACCCTACCTCCCAGCCCCAGCTGCGAGGGGCCGCCCGGGCTAACCGCGGCTCTGG CGCTCGCACGGTTGGTGACGGTGGTTACCGGATGAAGCGCGGGCGAGGAGGCCGTGGGCC TGGAGAAGCACGCTGCGCGGAGAAGGCCGGCGAGGAGGATGCGTCGCGGCGAGGACGCCG CCGCGAGGAGCGGGAGGGGCTGGGATTTGGTGAGGCCGGAGTGGAGCATAGCGCGGGGCG GGGGGAGTAGGGTTTTGGATGAGGCTGGAGCCGAGGGGGTTTTGGGCGGCGCGCGCCACC CGTTCGACAAAATGCCGCAACGAGCCGACGACGACGATGCGTGGAAAGTCACGGTTTTGC AGTTCGCTTCATCTCTGGCGACCAATTCATCCAACGGCACACGTGCATCTTTCTTCCTTT ACTCGCACACCGTGCGGCCCAGTTCACCTACAGCAGGCCATCGGCTAGCCCATCAGAATT CAGAAAGAGGAGAGAAGGGACTTCTGTATTTTGTGGACCCCTTTAAAACTACAGTACTGT AAGGGCAATTACTATAATGCTTCATATGCTACCTCTAGAAATAACACATAGAATTAGGTG ATGAGGTGGAGGAGAGAAGTGAGGTGAGAGATGATAAAACCACCCCTAAATGAAGAGGTG GCTTCCACACAAACTCCAAGAAGGATGTGAGAGTACTAAAGACATTGATATTTGTCTATT AGGGACAGTGGCGGACCCAGAAAAATCATATTGGGTGTGCCCACGCTAGGATGTATAATA CCATTCTTTAACTAAAACATGTCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)