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Oryza sativa
cluster # 2770 cluster # 2770       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2770#0 length = 1492 sequences # 2  

consensusID : consensus_2770#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1492
fasta sequence
                              [CACTGCGCAGCGCAGCAATGGCGGCCTACTGCTCTAGGGTTTACCACCACCACCCGGTCTCGCCTTCCACAATGCAGGGATCGCTCGCGAGGCCTTCGATCCACGCGGGATCCGCAAGCCTGACCTTCCGTGCTCGGCCCAATTCCGTGTCCATCGTGCGATGCGACGCGGACTCGCCGCCGGAGGGAAGTGCTGTGGCGGGATGGGCGCCTCCGGGGCCGTACACGGGGAGGGACCCGGCGGCGAGGAAGCCGGCGTGGCTGAGACAGCGTGCGGCGCAGGGGGAGAAGTACGCGAGGCTGAGGGAGTCGCTCGGGGAGCTCAAGCTCAACACCGTCTGCGTCGAGGCCCAATGCCCCAACATCGGTGAGTGTTGGGATGGCGGCGGCGGTGCAGGTGGGGACGGGGACGGCATTGCGACGGCGACGATCATGCTCCTCGGCGACACTTGTACCCGTGGTTGTCGATTCTGTGCCGTGAAAACCAGTAACAAGCCTCCGCCGCCCGATGCCCTGGAGCCTCTCAGGACAGCAGTGGCAGTTGCAAGTTGGGGCGTAGACTATGTTGTGCTGACAAGTGTTGATAGAGATGACCTTCCTGATGGTGGAAGTGGCCATTTTGCGCAAACAGTGAAGGCTCTAAAGGAATTGAAACCTGGTATACTGGTGGAGTGTCTAACTTCAGACTTTCGAGGTGACCTGGAGGCAGTTTCATCCTTGGCAAGCTCTGGTTTGGATGTGTTTGCACACAACATTGAAACTGTGAGGAGTCTGCAGAGAATAGTCAGAGATCCCCGAGCAGCATACGATCAGAGTTTAGCTGTTCTGAAACATGCGAAAAATTGCAAAGATGGTATGGTAACGAAGTCCTCTATCATGCTTGGTCTAGGTGAGACAGATGAAGAGGTGAAGCAAACCATGTGTGATTTGAGGGCCATTGACGTTGATATTCTGACCTTGGGACAATATTTACAGCCAACAGAAAGACACTTGCGGGTCAGAGAATATGTGACTCCTGAGAAGTTTGATTTCTGGAAGGAGTATGGGGAATCTCTGGGTTTTCTTTATGTTGCTAGTGGACCTCTGGTTCGGTCTTCGTATCGTGCGGGAGAGCTCTTTGTGCAAAATTTGGTCAGACGT-AAAAAAGCCGAGCTTGCACCTACTTTGCAGTAACCAAATAGGAGTATTACTACTATACATCTGATGGCCTGGTGCAGTTCTTTGATGAAAGTTTTGCATTGAAGTTGTGTGCTGATGACAGGAGTAAGGAGGTGGCACAATCGGGACCAAAGGCCTAGAGTGACATGCCTATAGGCGCTCGTTGTTCTAGCCATGCTGTGATATCTGCTGTAGCCTGTAAAAAAAATTGTTTTTCACTTTCTTACTCGGGCTGTCAAAAAAGTGTATGGAAACCAGATAAAATAATACCGAATGCTAAAATTCATGTTACTGCCCATGACGCTTCGTTATAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK101807             [CACTGCGCAGCGCAGCAATGGCGGCCTACTGCTCTAGGGTTTACCACCACCACCCGGTCTCGCCTTCCACAATGCAGGGATCGCTCGCGAGGCCTTCGATCCACGCGGGATCCGCAAGCCTGACCTTCCGTGCTCGGCCCAATTCCGTGTCCATCGTGCGATGCGACGCGGACTCGCCGCCGGAGGGAAGTGCTGTGGCGGGATGGGCGCCTCCGGGGCCGTACACGGGGAGGGACCCGGCGGCGAGGAAGCCGGCGTGGCTGAGACAGCGTGCGGCGCAGGGGGAGAAGTACGCGAGGCTGAGGGAGTCGCTCGGGGAGCTCAAGCTCAACACCGTCTGCGTCGAGGCCCAATGCCCCAACATCGGTGAGTGTTGGGATGGCGGCGGCGGTGCAGGTGGGGACGGGGACGGCATTGCGACGGCGACGATCATGCTCCTCGGCGACACTTGTACCCGTGGTTGTCGATTCTGTGCCGTGAAAACCAGTAACAAGCCTCCGCCGCCCGATGCCCTGGAGCCTCTCAGGACAGCAGTGGCAGTTGCAAGTTGGGGCGTAGACTATGTTGTGCTGACAAGTGTTGATAGAGATGACCTTCCTGATGGTGGAAGTGGCCATTTTGCGCAAACAGTGAAGGCTCTAAAGGAATTGAAACCTGGTATACTGGTGGAGTGTCTAACTTCAGACTTTCGAGGTGACCTGGAGGCAGTTTCATCCTTGGCAAGCTCTGGTTTGGATGTGTTTGCACACAACATTGAAACTGTGAGGAGTCTGCAGAGAATAGTCAGAGATCCCCGAGCAGCATACGATCAGAGTTTAGCTGTTCTGAAACATGCGAAAAATTGCAAAGATGGTATGGTAACGAAGTCCTCTATCATGCTTGGTCTAGGTGAGACAGATGAAGAGGTGAAGCAAACCATGTGTGATTTGAGGGCCATTGACGTTGATATTCTGACCTTGGGACAATATTTACAGCCAACAGAAAGACACTTGCGGGTCAGAGAATATGTGACTCCTGAGAAGTTTGATTTCTGGAAGGAGTATGGGGAATCTCTGGGTTTTCTTTATGTTGCTAGTGGACCTCTGGTTCGGTCTTCGTATCGTGCGGGAGAGCTCTTTGTGCAAAATTTGGTCAGACGT AAAAAAGCCGAGCTTGCACCTACTTTGCAGTAACCAAATAGGAGTATTACTACTATACATCTGATGGCCTGGTGCAGTTCTTTGATGAAAGTTTTGCATTGAAGTTGTGTGCTGATGACAGGAGTAAGGAGGTGGCACAATCGGGACCAAAGGCCTAGAGTGACATGCCTATAGGCGCTCGTTGTTCTAGCCATGCTGTGATATCTGCTGTAGCCTGTAAAAAAAATTGTTTTTCACTTTCTTACTCGGGCTGTCAAAAAAGTGTATGGAAACCAGATAAAATAATACCGAATGCTAAAATTCA                                                 ]
[+] EMBL AU101578             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGTTCGGTCTTCGTATCGTGCGGGAGAGCTCTTTGTGCAAAATTTGGTCAGNCGTAAAAAAANCCGAGCTTGCNCCTACTTTGCAGTACCCAAATNGGAGTATTACTACTATACATCTGATGGCCTGGTGCAGTTCTTTGATGAAAGTTTTGCATTGAAGTTGTGTGCTGATGACAGGAGTAAGGNGGTGGCACAATCGGGACCAAAGGCCTAGAGTGACATGCCTATAGGCGCTCGTTGTTCTAGCCATGCTGTGATATCTGCTGTAGCCTGTAAAAAAAATTGTTTTTCACTTTCTTACTCGGGCTGTCAAAAAAGTGTATGGAAACCAGATAAAATAATACCGAATGCTAAAATTCATGTTACTGCCCATGACGCTTCGTTATAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_2770#0 CACTGCGCAGCGCAGCAATGGCGGCCTACTGCTCTAGGGTTTACCACCACCACCCGGTCT CGCCTTCCACAATGCAGGGATCGCTCGCGAGGCCTTCGATCCACGCGGGATCCGCAAGCC TGACCTTCCGTGCTCGGCCCAATTCCGTGTCCATCGTGCGATGCGACGCGGACTCGCCGC CGGAGGGAAGTGCTGTGGCGGGATGGGCGCCTCCGGGGCCGTACACGGGGAGGGACCCGG CGGCGAGGAAGCCGGCGTGGCTGAGACAGCGTGCGGCGCAGGGGGAGAAGTACGCGAGGC TGAGGGAGTCGCTCGGGGAGCTCAAGCTCAACACCGTCTGCGTCGAGGCCCAATGCCCCA ACATCGGTGAGTGTTGGGATGGCGGCGGCGGTGCAGGTGGGGACGGGGACGGCATTGCGA CGGCGACGATCATGCTCCTCGGCGACACTTGTACCCGTGGTTGTCGATTCTGTGCCGTGA AAACCAGTAACAAGCCTCCGCCGCCCGATGCCCTGGAGCCTCTCAGGACAGCAGTGGCAG TTGCAAGTTGGGGCGTAGACTATGTTGTGCTGACAAGTGTTGATAGAGATGACCTTCCTG ATGGTGGAAGTGGCCATTTTGCGCAAACAGTGAAGGCTCTAAAGGAATTGAAACCTGGTA TACTGGTGGAGTGTCTAACTTCAGACTTTCGAGGTGACCTGGAGGCAGTTTCATCCTTGG CAAGCTCTGGTTTGGATGTGTTTGCACACAACATTGAAACTGTGAGGAGTCTGCAGAGAA TAGTCAGAGATCCCCGAGCAGCATACGATCAGAGTTTAGCTGTTCTGAAACATGCGAAAA ATTGCAAAGATGGTATGGTAACGAAGTCCTCTATCATGCTTGGTCTAGGTGAGACAGATG AAGAGGTGAAGCAAACCATGTGTGATTTGAGGGCCATTGACGTTGATATTCTGACCTTGG GACAATATTTACAGCCAACAGAAAGACACTTGCGGGTCAGAGAATATGTGACTCCTGAGA AGTTTGATTTCTGGAAGGAGTATGGGGAATCTCTGGGTTTTCTTTATGTTGCTAGTGGAC CTCTGGTTCGGTCTTCGTATCGTGCGGGAGAGCTCTTTGTGCAAAATTTGGTCAGACGTA AAAAAGCCGAGCTTGCACCTACTTTGCAGTAACCAAATAGGAGTATTACTACTATACATC TGATGGCCTGGTGCAGTTCTTTGATGAAAGTTTTGCATTGAAGTTGTGTGCTGATGACAG GAGTAAGGAGGTGGCACAATCGGGACCAAAGGCCTAGAGTGACATGCCTATAGGCGCTCG TTGTTCTAGCCATGCTGTGATATCTGCTGTAGCCTGTAAAAAAAATTGTTTTTCACTTTC TTACTCGGGCTGTCAAAAAAGTGTATGGAAACCAGATAAAATAATACCGAATGCTAAAAT TCATGTTACTGCCCATGACGCTTCGTTATAAAAAAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)