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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2836 cluster # 2836       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2836#0 length = 1346 sequences # 2  

consensusID : consensus_2836#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1346
fasta sequence
                              [ACATCTTAATAAATCTAGAGGAAATGAGATGGAGTTCCTAGTGAAAGAAGATGCTAAAATAACTGAATTAGCACAAACCAACTTAGATATAAAGAACAGTGCTAACCAAAGGGCCATTCAAAATATTCAATGCATAAATATGGATGAAGCAGAATTTGTTACTGATGATTTGAGAAGTGACTGTTTGGCTATGCATGCAGGCAATGTGCAAAGAGATGCATCCCTGACAAAGAACATTGAGGAGAGTAGTGCAAGCCTAGAAGGCGCAGACGATGAAAAAATAATATGGCAGATTGCAGGATGGAAGTAGGAAACACTATGAGTTCGCAAGTAGTGACAATGAAGGAGAAAACTAACTTTATGCTTGAAAATTCTAGTGTGCAAGAAAATGATAATACAGGATTTGAAACGCTTAATGACAAAAGAGAGGAGCAGGTGAAAAATATCAAACTTAATCCACTAAAAGATGAGAATAACCATAATACTTTTGAGCACACATACTTAATTGAAGGAAATGTGGAATTGCATGTGAAAGATGAAAAATTAGTGACATTGGAGACAGAGGGAAGTGAGCTTGAAGTTATGGATACAGTTTTAGTGAGTGATGCTGAGTTAAGGTTAATGGAACCTCCTCAATGTGAAGAGATTGATGCAATGAAATCGACGGGAGATTTTTCGGAAAGTCATTGCTTGATATTCGAAGCTAATGTGCACAATGAGCCGTCAACTTCAACAGATGATGTGGTTGANGCTGCTGACCTACAAGATGAGACCNTTTATATAGAAGAGCCCAAAGAAGCTTAATTGGCAGATG-AAACGATAAGATGGT-ACTNTGGAGATGGAGTCACTAGTGGAAAATCTAA-NTTGGAATNTTTGGAAAGTGAGAAAAATGTTATGTTAGAATATGAGAAAGAGATGAAAGTTGGACATGTTGGTCAATCCGATGAAAATGATGTGGGATTACTTGTGGAAGAAGATGCCAAGAAAATTAAGTTAGAGGAGGCTGACTCAGATATAAAGAGCAATGTTGACAAAAAGGCCTTTCAAATTCTTCAATGTGAATATATGGATGAAGCAAAATTTGGCACTGTTGATTCGAAAAGTAATTATTTGGCCGTGCATGAAGATAATGTTCAAAGAGAAGCATCCCTGACAAACAATGTTCAGGAAAGTAGTGCAAGCCTAGATAGTGCAGACGATGAAAAAAATGATATAGCAGATTGCGGGATGAAAGAAAGAAACACTATGAGTTTGCAAGTAGGGATGATGGAGGAGAATACTAACTTTATACAAGTACAGTCTAGTGGACTAGAAAAGGATTGTACAAGATTTGNAAAGNTGAATGA]

[+] EMBL CA764485             [ACATCTTAATAAATCTAGAGGAAATGAGATGGAGTTCCTAGTGAAAGAAGATGCTAAAATAACTGAATTAGCACAAACCAACTTAGATATAAAGAACAGTGCTAACCAAAGGGCCATTCAAAATATTCAATGCATAAATATGGATGAAGCAGAATTTGTTACTGATGATTTGAGAAGTGACTGTTTGGCTATGCATGCAGGCAATGTGCAAAGAGATGCATCCCTGACAAAGAACATTGAGGAGAGTAGTGCAAGCCTAGAAGGCGCAGACGATGAAAAAATAATATGGCAGATTGCAGGATGGAAGTAGGAAACACTATGAGTTCGCAAGTAGTGACAATGAAGGAGAAAACTAACTTTATGCTTGAAAATTCTAGTGTGCAAGAAAATGATAATACAGGATTTGAAACGCTTAATGACAAAAGAGAGGAGCAGGTGAAAAATATCAAACTTAATCCACTAAAAGATGAGAATAACCATAATACTTTTGAGCACACATACTTAATTGAAGGAAATGTGGAATTGCATGTGAAAGATGAAAAATTAGTGACATTGGAGACAGAGGGAAGTGAGCTTGAAGTTATGGATACAGTTTTAGTGAGTGATGCTGAGTTAAGGTTAATGGAACCTCCTCAATGTGAAGAGATTGATGCAATGAAATCGACGGGAGATTTTTCGGAAAGTCATTGCTTGATATTCGAAGCTAATGTGCACAATGAGCCGTCAACTTCAACAGATGATGTGGTTGANGCTGCTGACCTACAAGATGAGACCNTTTATATAGAAGAGCCCAAAGAAGCTTAATTGGCAGATG AAACGATAAGATGGT ACTNTGGAGATGGAGTCACTAGTGGAAAATCTAA NTTGGAATNTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA764120             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTTGAAGTTATGGATACAGTTTTAGTGAGTGATGCTGAGTTAAGGTTAATGGAACCTCCTCAATGTGAAGAGATTGATGCAATGAAATCGACGGGAGATTTTTCGGAAAGTCATTGCTTGATATTCGAAGCTAATGTGCACAATGAGCCGTCAACTTCAACAGATGATGTGGTTGAGGCTGCTGACCTACAAGATGAGACCTTTTATATAGAAGAGCCCAAAGAAGCTAAATTGGCAGATGAAAACGATAAGATGGTAACTATGGAGATGGAGTCACTAGTGAAAAATCTAAGTTTGGAATTATTGGAAAGTGAGAAAAATGTTATGTTAGAATATGAGAAAGAGATGAAAGTTGGACATGTTGGTCAATCCGATGAAAATGATGTGGGATTACTTGTGGAAGAAGATGCCAAGAAAATTAAGTTAGAGGAGGCTGACTCAGATATAAAGAGCAATGTTGACAAAAAGGCCTTTCAAATTCTTCAATGTGAATATATGGATGAAGCAAAATTTGGCACTGTTGATTCGAAAAGTAATTATTTGGCCGTGCATGAAGATAATGTTCAAAGAGAAGCATCCCTGACAAACAATGTTCAGGAAAGTAGTGCAAGCCTAGATAGTGCAGACGATGAAAAAAATGATATAGCAGATTGCGGGATGAAAGAAAGAAACACTATGAGTTTGCAAGTAGGGATGATGGAGGAGAATACTAACTTTATACAAGTACAGTCTAGTGGACTAGAAAAGGATTGTACAAGATTTGNAAAGNTGAATGA]


>consensus_2836#0 ACATCTTAATAAATCTAGAGGAAATGAGATGGAGTTCCTAGTGAAAGAAGATGCTAAAAT AACTGAATTAGCACAAACCAACTTAGATATAAAGAACAGTGCTAACCAAAGGGCCATTCA AAATATTCAATGCATAAATATGGATGAAGCAGAATTTGTTACTGATGATTTGAGAAGTGA CTGTTTGGCTATGCATGCAGGCAATGTGCAAAGAGATGCATCCCTGACAAAGAACATTGA GGAGAGTAGTGCAAGCCTAGAAGGCGCAGACGATGAAAAAATAATATGGCAGATTGCAGG ATGGAAGTAGGAAACACTATGAGTTCGCAAGTAGTGACAATGAAGGAGAAAACTAACTTT ATGCTTGAAAATTCTAGTGTGCAAGAAAATGATAATACAGGATTTGAAACGCTTAATGAC AAAAGAGAGGAGCAGGTGAAAAATATCAAACTTAATCCACTAAAAGATGAGAATAACCAT AATACTTTTGAGCACACATACTTAATTGAAGGAAATGTGGAATTGCATGTGAAAGATGAA AAATTAGTGACATTGGAGACAGAGGGAAGTGAGCTTGAAGTTATGGATACAGTTTTAGTG AGTGATGCTGAGTTAAGGTTAATGGAACCTCCTCAATGTGAAGAGATTGATGCAATGAAA TCGACGGGAGATTTTTCGGAAAGTCATTGCTTGATATTCGAAGCTAATGTGCACAATGAG CCGTCAACTTCAACAGATGATGTGGTTGANGCTGCTGACCTACAAGATGAGACCNTTTAT ATAGAAGAGCCCAAAGAAGCTTAATTGGCAGATGAAACGATAAGATGGTACTNTGGAGAT GGAGTCACTAGTGGAAAATCTAANTTGGAATNTTTGGAAAGTGAGAAAAATGTTATGTTA GAATATGAGAAAGAGATGAAAGTTGGACATGTTGGTCAATCCGATGAAAATGATGTGGGA TTACTTGTGGAAGAAGATGCCAAGAAAATTAAGTTAGAGGAGGCTGACTCAGATATAAAG AGCAATGTTGACAAAAAGGCCTTTCAAATTCTTCAATGTGAATATATGGATGAAGCAAAA TTTGGCACTGTTGATTCGAAAAGTAATTATTTGGCCGTGCATGAAGATAATGTTCAAAGA GAAGCATCCCTGACAAACAATGTTCAGGAAAGTAGTGCAAGCCTAGATAGTGCAGACGAT GAAAAAAATGATATAGCAGATTGCGGGATGAAAGAAAGAAACACTATGAGTTTGCAAGTA GGGATGATGGAGGAGAATACTAACTTTATACAAGTACAGTCTAGTGGACTAGAAAAGGAT TGTACAAGATTTGNAAAGNTGAATGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)