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Oryza sativa
cluster # 2966 cluster # 2966       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2966#0 length = 1530 sequences # 2  

consensusID : consensus_2966#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1530
fasta sequence
                              [GATCTGATCGTGCCCATCTCAAGAAGCTTGCCGCTGAACGATGGCCAATGGTTCGCCATCCAGAACTCCACCGATGTGCAGGGCAAGAGGCTCGCCATTCCGTCGAACACCTACCGGGCGATCCTTGAGGTGTTCGTCTCCTTCCACTCCAACGATGAATTCTGGTACACAAACCCTCCCAATGAGTACATTGAAGCAAATAACTTGTCCAATGTCCCTGGCAATGGCGCATTCCGGGAGGTTGTTGTTAAAGTCAATGATGATATCGTTGGAGCTATTTGGCCTTTCACCGTGATTTACACTGGCGGTGTCAATCCTCTTCTGTGGCGACCAATCACCGGCATTGGTTCATTCAACCTACCTACATATGACATTGACATTACACCTTTCTTGGGCAAGCTGTTGGATGGCAAGGAGCATGATTTTGGGTTCGGTGTGACTAATGCGCTGGATGTGTGGTATATTGATGCCAATTTGCATCTATGGTTGGATCACAAGAGTGAGGAGACTACTGGGAGCCTGATCAGCTATGAAGCTCAAGGACTGGTTCTGAATGTGGACTCGGGATTCAGTGGGCTGGATGGGCAGTTTGTAACTAGCGCAAGCCGTCATATCTCCGCTACCGGGTTGGTGAAATCGTCTTATGGGGAGGTCACCACGAATTTTTACCAGAGATTCAGTTATGTGAATAGCAATGTGTATAGCAAGAACGGCTCGGTGCAAGTGGTGAACCAAACCATTGATGCAAAGTCTGGTGTTTTTGCCAAGGATGCTTTGGCTGTGCTGCTCTCTGAGGAACTTCACCAGATCTTCCCTCTGTATGTTTATACTGGTACTTCAGATGAAGAAGCTGATGAGTACACATTGATTTCACACGTCAAATTGGGCGTCAACGAGAAGGAGACATCGGGCGGGAAGATGGGGTTCTCATACAACTCCCTGCGGAACGCGCAGTCGGCCCATGGCAGTATGAAGGTGAAGAAGAATTTGGTCGTTGGTGGATTGGGGGAGACCCATCAGGCGTATAAATATGTTGGTGCTGATGGATGCTACTTCAGGGATGTTAGGAGCAAGAACTACACAGTGCTTTCAGACCACTCTGGTGATTCCTGCACAAAGAGAAATCCTTACAATGGTGCTAAATTCTCTCTCAGGAACGATCAATCAGCAAGAAGGAAGTTGATGGTGAATAATCTTTAGTGTTGTATAGCTTGGAACAAATAGGGAACTGAACTGTCCATGGTTCTCTCCATTTTACTCTGTCTCTTGATCTCTTCAATAAAGGGAGTTTAGCTTAGCTTATCTTTGATGTGTAGTCAGTAAGAAACTTGGAAATTTCTCTATAACCGCTTCAAATTGAATCCCCCTAGAGAAAAACTTTGAACTTCCCCTGCTAGATAGTGGAAAGTAAGCAATAGGCTATTCAGATCAAGATTCTGAGGGATGCAATCTCTCCCTTTTCTTTTATCTTTCATGTTGAATTGTTTTAGTGTACAGATCCGAGTCCAAACTCCATATGAAGCATATTGA]

[+] EMBL AK103341             [GATCTGATCGTGCCCATCTCAAGAAGCTTGCCGCTGAACGATGGCCAATGGTTCGCCATCCAGAACTCCACCGATGTGCAGGGCAAGAGGCTCGCCATTCCGTCGAACACCTACCGGGCGATCCTTGAGGTGTTCGTCTCCTTCCACTCCAACGATGAATTCTGGTACACAAACCCTCCCAATGAGTACATTGAAGCAAATAACTTGTCCAATGTCCCTGGCAATGGCGCATTCCGGGAGGTTGTTGTTAAAGTCAATGATGATATCGTTGGAGCTATTTGGCCTTTCACCGTGATTTACACTGGCGGTGTCAATCCTCTTCTGTGGCGACCAATCACCGGCATTGGTTCATTCAACCTACCTACATATGACATTGACATTACACCTTTCTTGGGCAAGCTGTTGGATGGCAAGGAGCATGATTTTGGGTTCGGTGTGACTAATGCGCTGGATGTGTGGTATATTGATGCCAATTTGCATCTATGGTTGGATCACAAGAGTGAGGAGACTACTGGGAGCCTGATCAGCTATGAAGCTCAAGGACTGGTTCTGAATGTGGACTCGGGATTCAGTGGGCTGGATGGGCAGTTTGTAACTAGCGCAAGCCGTCATATCTCCGCTACCGGGTTGGTGAAATCGTCTTATGGGGAGGTCACCACGAATTTTTACCAGAGATTCAGTTATGTGAATAGCAATGTGTATAGCAAGAACGGCTCGGTGCAAGTGGTGAACCAAACCATTGATGCAAAGTCTGGTGTTTTTGCCAAGGATGCTTTGGCTGTGCTGCTCTCTGAGGAACTTCACCAGATCTTCCCTCTGTATGTTTATACTGGTACTTCAGATGAAGAAGCTGATGAGTACACATTGATTTCACACGTCAAATTGGGCGTCAACGAGAAGGAGACATCGGGCGGGAAGATGGGGTTCTCATACAACTCCCTGCGGAACGCGCAGTCGGCCCATGGCAGTATGAAGGTGAAGAAGAATTTGGTCGTTGGTGGATTGGGGGAGACCCATCAGGCGTATAAATATGTTGGTGCTGATGGATGCTACTTCAGGGATGTTAGGAGCAAGAACTACACAGTGCTTTCAGACCACTCTGGTGATTCCTGCACAAAGAGAAATCCTTACAATGGTGCTAAATTCTCTCTCAGGAACGATCAATCAGCAAGAAGGAAGTTGATGGTGAATAATCTTTAGTGTTGTATAGCTTGGAACAAATAGGGAACTGAACTGTCCATGGTTCTCTCCATTTTACTCTGTCTCTTGATCTCTTCAATAAAGGGAGTTTAGCTTAGCTTATCTTTGATGTGTAGTCAGTAAGAAACTTGGAAATTTCTCTATAACCGCTTCAAATTGAATCCCCCTAGAGAAAAACTTTGAACTTCCCCTGCTAGATAGTGGAAAGTAAGCAATAGGCTATTCAGATCAAGATTCTGAGGGATGCAATCTCTCCCTTTTCTTTTATCTTTCATGTTGAATTGTTTTAGTGTACAGATCCGAGTCCAAACTCCATATGAAGCATAT   ]
[+] EMBL CA764699             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGGGTTCTCATACAACTCCCTGCGGAACGCGCAGTCGGCCCATGGCAGTATGAAGGTGAAGAAGAATTTGGTCGTTGGTGGATTGGGGGAGACCCATCAGGCGTATAAATATGTTGGTGCTGATGGATGCTACTTCAGGGATGTTAGGAGCAAGAACTACACAGTGCTTTCAGACAACTCTGGTGATTCCTGCACAAAGAGAAATCCTTACAATGGTGCTAAATTCTCTCTCAGGAACGATCAATCAGCAAGAAGGAAGTTGATGGTGAATAATCTATAGTGTTGTATAGCTTGGAACAAGTAGGGAACTGAACTGTCCATGGTTCTCTCCATTTTACTCTGTCTCTTGATCTCTTCAATAAAGGGAGTTTAGCTTAGCTTATCTTTGATGTGTAGTCAGTAAGAAACTTGGAAATTTCTCTATAACCGCTTCAAATTGAATCCCCCTAGAGAAAAACTTTGAACTTCCCCTGCTAGATAGTGGAAAGTAAGCAATAGGCTATTCAGATCAAGATTCTGAGGGATGCAATCTCTCCCTTTTCTTTTATCTTTCATGNTGAATTGTTTTAGTGTACAGATCCGAGTCCAAACTCCATATGAAGCATATTGA]


>consensus_2966#0 GATCTGATCGTGCCCATCTCAAGAAGCTTGCCGCTGAACGATGGCCAATGGTTCGCCATC CAGAACTCCACCGATGTGCAGGGCAAGAGGCTCGCCATTCCGTCGAACACCTACCGGGCG ATCCTTGAGGTGTTCGTCTCCTTCCACTCCAACGATGAATTCTGGTACACAAACCCTCCC AATGAGTACATTGAAGCAAATAACTTGTCCAATGTCCCTGGCAATGGCGCATTCCGGGAG GTTGTTGTTAAAGTCAATGATGATATCGTTGGAGCTATTTGGCCTTTCACCGTGATTTAC ACTGGCGGTGTCAATCCTCTTCTGTGGCGACCAATCACCGGCATTGGTTCATTCAACCTA CCTACATATGACATTGACATTACACCTTTCTTGGGCAAGCTGTTGGATGGCAAGGAGCAT GATTTTGGGTTCGGTGTGACTAATGCGCTGGATGTGTGGTATATTGATGCCAATTTGCAT CTATGGTTGGATCACAAGAGTGAGGAGACTACTGGGAGCCTGATCAGCTATGAAGCTCAA GGACTGGTTCTGAATGTGGACTCGGGATTCAGTGGGCTGGATGGGCAGTTTGTAACTAGC GCAAGCCGTCATATCTCCGCTACCGGGTTGGTGAAATCGTCTTATGGGGAGGTCACCACG AATTTTTACCAGAGATTCAGTTATGTGAATAGCAATGTGTATAGCAAGAACGGCTCGGTG CAAGTGGTGAACCAAACCATTGATGCAAAGTCTGGTGTTTTTGCCAAGGATGCTTTGGCT GTGCTGCTCTCTGAGGAACTTCACCAGATCTTCCCTCTGTATGTTTATACTGGTACTTCA GATGAAGAAGCTGATGAGTACACATTGATTTCACACGTCAAATTGGGCGTCAACGAGAAG GAGACATCGGGCGGGAAGATGGGGTTCTCATACAACTCCCTGCGGAACGCGCAGTCGGCC CATGGCAGTATGAAGGTGAAGAAGAATTTGGTCGTTGGTGGATTGGGGGAGACCCATCAG GCGTATAAATATGTTGGTGCTGATGGATGCTACTTCAGGGATGTTAGGAGCAAGAACTAC ACAGTGCTTTCAGACCACTCTGGTGATTCCTGCACAAAGAGAAATCCTTACAATGGTGCT AAATTCTCTCTCAGGAACGATCAATCAGCAAGAAGGAAGTTGATGGTGAATAATCTTTAG TGTTGTATAGCTTGGAACAAATAGGGAACTGAACTGTCCATGGTTCTCTCCATTTTACTC TGTCTCTTGATCTCTTCAATAAAGGGAGTTTAGCTTAGCTTATCTTTGATGTGTAGTCAG TAAGAAACTTGGAAATTTCTCTATAACCGCTTCAAATTGAATCCCCCTAGAGAAAAACTT TGAACTTCCCCTGCTAGATAGTGGAAAGTAAGCAATAGGCTATTCAGATCAAGATTCTGA GGGATGCAATCTCTCCCTTTTCTTTTATCTTTCATGTTGAATTGTTTTAGTGTACAGATC CGAGTCCAAACTCCATATGAAGCATATTGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)