Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3018 cluster # 3018       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3018#0 length = 275 sequences # 2  
consensusID : consensus_3018#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 275
fasta sequence 
                              [TAATCGCCAACACACCCACCAAAGTTTACGAAGCCGGAGTTCACGGAGCCAACTCGCTAGGAGATCTCGTCGAATCCCTCGACTACGATCTCGTCGGTATCGCTTGTTTCGGTTACTCTCTTTGTAATCTGTTCTTATCATCATCAATCTCATATAAACTGGATTAGGGCTATTACCTGCTAAGGGGCCTGAACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACTGTCTTGCCG]

[+] EMBL CF315777             [TAATCGCCAACACACCCACCAAAGTTTACGAAGCCGGAGTTCACGGAGCCAACTCGCTAGGAGATCTCGTCGAATCCCTCGACTACGATCTCGTCGGTATCGCTTGTTTCGGTTACTCTCTTTGTAATCTGTTCTTATCATCATCAATCTCATATAAACTGGATTAGGGCTATTACCTGCTAAGGGGCCTGAACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACTGTCTTGCCG]
[-] EMBL CF315776             [ AATCGCCAACACCCCCCCCAAAGTTTACGAAGCCGGAGTTCCCGGAGCCAACTCGTTAGGAGATTTCGTCGAATCCCTCGAATACGATTTTGTCGGTATCGCTTGTTTCGGTTACTCTCTTTGTAATCTGTTTTTATCATCACCAATTTCAAATAAACTGGATTAGGGCTATTCCCTGTTAAGGGGCCTGAACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAA                         ]




>consensus_3018#0
TAATCGCCAACACACCCACCAAAGTTTACGAAGCCGGAGTTCACGGAGCCAACTCGCTAG
GAGATCTCGTCGAATCCCTCGACTACGATCTCGTCGGTATCGCTTGTTTCGGTTACTCTC
TTTGTAATCTGTTCTTATCATCATCAATCTCATATAAACTGGATTAGGGCTATTACCTGC
TAAGGGGCCTGAACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAACCACTGTCTTGCCG

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)