cluster # 3027

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Oryza sativa
cluster # 3027 cluster # 3027 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3027#0 length = 595 sequences # 2

consensusID : consensus_3027#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 595
fasta sequence

                              [CTCTACTTCTGCAAGCTTATTCTTCGACTGATCAAGCAA-GTAGAGACATGGGCGGCAAGGNTGGCGGCGGAGGCGGA-GGCGGCAAGGGTGGTGGTGGAGGAGGTGGAGGCGGCAAAGGAGGTGGAGGCGGCAGCGGAG-GTGGGGGCAGGAGCGGCGGTGGCGGAGGAGGAGGAGGAGGAAAGGGAGGTGGCGAAGGAGGTTCAGGCAAGTACGGCGGCGGATACAGCGGCGGGCACGCTGGTGGCGGCGGTGGCGCAGGCAAGTCCGGCGGCTACCACGGCGGCGGTGGGGGCGACAGCATGAAGGCTCCCGGCGGCGACGGATCGTACATCTCCCGCTCCGGCTTCGAGTCCAACCCGCAGGGCTACTTCCAGGGCCTCCATGGCGATGGCAAGTAGAGGTTTTGGAGCGCTCCAAAAGTTAGGCTGCTAATCGATCAGAATTCGCGATTATGGCCCATGAATGGTGGCTTCTAAATAATGTATTATCGAGTCTGTAAGGCAGTCTACTTTCTCCAAATCTCTGTTATGTATCGGATTATCGTGGAAATCTAAGTGAATGCGTTCGATAATTTTATGTCTTTTAGGTAAAAAAA]

[+] EMBL AU082628             [CTCTACTTCTGCAAGCTTATTCTTCGACTGATCAAGCAA GTAGAGACATGGGCGGCAAGGNTGGCGGCGGAGGCGGA GGCGGCAAGGGTGGTGGTGGAGGAGGTGGAGGCGGCAAAGGAGGTGGAGGCGGCAGCGGAG GTGGGGGCAGGAGCGGCGGTGGCGGAGGAGGAGGAGGAGGAAAGGGAGGTGGCGAAGGAGGTTCAGGCAAGTACGGCGGCGGATACAGCGGCGGGCACGCTGGTGGCGGCGGTGGCGCAGGCAAGTCCGGCGGCTACCACGGCGGCGGTGGGGGCGACAGCATGAAGGCTCCCGGCGGCGACGGATCGTACATCTCCCGCTCCGGCTTCGAGTCCAACCCGCAGGGCTACTTCCAGGGCCTCCATGGCGATGGCAAGTAGAGGTTTTGGAGCGCTCCAAAAGTTAGGCTGCTAATCGATCAGAATTCGCGATTATGGCCCATGAATGGTGGCTTCTAAATAATGTATTATCGAGTCTGTAAGGCAGTCTACTTTCTCCAAATCTCTGTTATGTATCGGATTATCGTGGAAATCTAAGTGAATGCGTTCGATAATTTTATGTCTTTTAGGTAAAAAAA]
[+] EMBL C93485               [CTCTACTTCTGCAAGCTTATTCTTCGACTGATCAAGCAAGGTAGAGACATGGGCGGCAAGGGTGGCGGCGGA GNGGANGGCGGCAAGGGTGGTGGTGGAGGAGGTGGAGGCGGCAAAGGAGGTGGAGGCGGCNG GANGTGTGGGGGCAGGAGCGGCGGTGGCGGAGGAGGAGGAGGAGGAAAGGGAGGTNGCGAAGGAGGTTCAGGCAAGTACGGCGGCGGATACAGCGGCG                                                                                                                                                                                                                                                                                                                                                                            ]




>consensus_3027#0
CTCTACTTCTGCAAGCTTATTCTTCGACTGATCAAGCAAGTAGAGACATGGGCGGCAAGG
NTGGCGGCGGAGGCGGAGGCGGCAAGGGTGGTGGTGGAGGAGGTGGAGGCGGCAAAGGAG
GTGGAGGCGGCAGCGGAGGTGGGGGCAGGAGCGGCGGTGGCGGAGGAGGAGGAGGAGGAA
AGGGAGGTGGCGAAGGAGGTTCAGGCAAGTACGGCGGCGGATACAGCGGCGGGCACGCTG
GTGGCGGCGGTGGCGCAGGCAAGTCCGGCGGCTACCACGGCGGCGGTGGGGGCGACAGCA
TGAAGGCTCCCGGCGGCGACGGATCGTACATCTCCCGCTCCGGCTTCGAGTCCAACCCGC
AGGGCTACTTCCAGGGCCTCCATGGCGATGGCAAGTAGAGGTTTTGGAGCGCTCCAAAAG
TTAGGCTGCTAATCGATCAGAATTCGCGATTATGGCCCATGAATGGTGGCTTCTAAATAA
TGTATTATCGAGTCTGTAAGGCAGTCTACTTTCTCCAAATCTCTGTTATGTATCGGATTA
TCGTGGAAATCTAAGTGAATGCGTTCGATAATTTTATGTCTTTTAGGTAAAAAAA

clustalw multiple alignements is not computed in this case