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Oryza sativa
cluster # 3044 cluster # 3044       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3044#0 length = 1496 sequences # 2  

consensusID : consensus_3044#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1496
fasta sequence
                              [GGGATGACGAGGCTTTGAGGTCGATGCAGGCTTGCTTAGACGGGGAGGATAGTGAATTGGTGATTGAAATGGTTGGTAATGACAATGAGCAATTGCAACTCGATGCGATGATGAACAACTTGTCAGGGTTGATTGATGATGCTAGTGCCTGTGTAATGTCGGCGCAGAGCTGTGGAGTATCTGGAGATAAACTGCAGAGTGATGACAGAGTAGCTGAGGAGGTGAAAGAATTGGGAGCTGGGATTGGCAATGACAGATCTGTGTGCAGTTTAGATCATGGGTCACTGGATGGTGGTGGTGGTTTTGAGGAAGGAGAGATTGAGGGCGACACGCAGAATTTAGATGCAGATGATTCTGGCAATTCAGAGCTTCAAGATGATGTGGAATTGGAAGAGGATTTTGATAGCAGAAGGATAGAGGAGGATGGGTCATGTGGCCATGACTTAAAGAGCAATTTGCATTTGATACCTCAAAAAGGAAATGGCGACACTGCACGGAACATGCTATGTAATAGCAAGGGTGATTCTCAAATGCATGTTGCCAGGGCGCAAGCAGTCAGTTATGATGAAGTTCTCGATTGGAATGAGACACCTTTGCCTGATGATAAGGCTCTCAAACATGGAAACACAAGAAAGCGCACCTTGACAGAGGAGAGAAAAGCTAAGAAGACGAAAACTAAACGAATTAAGAGAGCATTGCAACGGGAAGCCGAAGGGGTGAAAAGACTGAAACTTCAACCAGTTATAAAGCCTAAAGTGGTGAAGGTTTGCCACTTCTACTTGCATGGGAAGTGCCAGCAGGGCAATTTGTGCAAGTTCTCCCATGATACGACACCTTTGACAAAATCTAAGCCCTGCACGCATTATGCACGTGGTTCTTGTTTGAAAGGAGATGATTGCCCTTATGATCATGAGTTGTCAAAGTACCCTTGCCACAATTTTATGGAAAATGGAATGTGCATCAGAGGTGATAAATGCAAATTTTCTCATGTGATACCAACTGCAGAAGGTCCGTCCACATCAGATGCAAAGAAATCTAATGCGTCATCAGTACCTGAAAAAGCAAATTGCCAAGAGCAAACAAGTCGTCAGAAAACTTCGACAGTATACAGTGGTGAACCTGCAACCTCTGTTCCTATCAAACATCATTCCATCCTTAAAAACCTTGCTGGCATATCAGGAAATGCTCAAAAGGTACCTATTCGTATACCAAGGGGTATACAGTTTCTTCCTTTCAATAAAGCCAGACCAGATTCTAGCATTTTGCATCAGGATGTTGTGTCCACTGAGAAGCATAAGAATCCAACTGGTGGTCCACATCAGAACTTTGGAAGACCTCAACCCGCAGACGGGAAAAAACTTGGCAAGCACAATGGACATAGATCAGCTNCACTGGTGGATGAAAATGACTCATCAAAACAAGCTAATCTACATTCATGGTTCAGAANCAAAGAAAAATAGNTTGNCTACCACTGGNTGCAGNGNCCAGCTCAGTAA]

[+] EMBL CB635396             [GGGATGACGAGGCTTTGAGGTCGATGCAGGCTTGCTTAGACGGGGAGGATAGTGAATTGGTGATTGAAATGGTTGGTAATGACAATGAGCAATTGCAACTCGATGCGATGATGAACAACTTGTCAGGGTTGATTGATGATGCTAGTGCCTGTGTAATGTCGGCGCAGAGCTGTGGAGTATCTGGAGATAAACTGCAGAGTGATGACAGAGTAGCTGAGGAGGTGAAAGAATTGGGAGCTGGGATTGGCAATGACAGATCTGTGTGCAGTTTAGATCATGGGTCACTGGATGGTGGTGGTGGTTTTGAGGAAGGAGAGATTGAGGGCGACACGCAGAATTTAGATGCAGATGATTCTGGCAATTCAGAGCTTCAAGATGATGTGGAATTGGAAGAGGATTTTGATAGCAGAAGGATAGAGGAGGATGGGTCATGTGGCCATGACTTAAAGAGCAATTTGCATTTGATACCTCAAAAAGGAAATGGCGACACTGCACGGAACATGCTATGTAATAGCAAGGGTGATTCTCAAATGCATGTTGCCAGGGCGCAAGCAGTCAGTTATGATGAAGTTCTCGATTGGAATGAGACACCTTTGCCTGATGATAAGGCTCTCAAACATGGAAACACAAGAAAGCGCACCTTGACAGAGGAGAGAAAAGCTAAGAAGACGAAAACTAAACGAATTAAGAGAGCATTGCAACGGGAAGCCGAAGGGGTGAAAAGACTGAAACTTCAACCAGTTATAAAGCCTAAAGTGGTGAAGGTTTGCCACTTCTACTTGCATGGGAAGTGCCAGCAGGGCAATTTGTGCAAGTTCTCCCATGATACGACACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA765100             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTGAAACTT NACCAGTTATAAAGCCTAAAGTGGTGAAGGTTTGCCACTTCTACTTGCATGGGAAGTGCCAGCAGGGCAATTTGTGCAAGTTCTCCCATGATACGACACCTTTGACAAAATCTAAGCCCTGCACGCATTATGCACGTGGTTCTTGTTTGAAAGGAGATGATTGCCCTTATGATCATGAGTTGTCAAAGTACCCTTGCCACAATTTTATGGAAAATGGAATGTGCATCAGAGGTGATAAATGCAAATTTTCTCATGTGATACCAACTGCAGAAGGTCCGTCCACATCAGATGCAAAGAAATCTAATGCGTCATCAGTACCTGAAAAAGCAAATTGCCAAGAGCAAACAAGTCGTCAGAAAACTTCGACAGTATACAGTGGTGAACCTGCAACCTCTGTTCCTATCAAACATCATTCCATCCTTAAAAACCTTGCTGGCATATCAGGAAATGCTCAAAAGGTACCTATTCGTATACCAAGGGGTATACAGTTTCTTCCTTTCAATAAAGCCAGACCAGATTCTAGCATTTTGCATCAGGATGTTGTGTCCACTGAGAAGCATAAGAATCCAACTGGTGGTCCACATCAGAACTTTGGAAGACCTCAACCCGCAGACGGGAAAAAACTTGGCAAGCACAATGGACATAGATCAGCTNCACTGGTGGATGAAAATGACTCATCAAAACAAGCTAATCTACATTCATGGTTCAGAANCAAAGAAAAATAGNTTGNCTACCACTGGNTGCAGNGNCCAGCTCAGTAA]


>consensus_3044#0 GGGATGACGAGGCTTTGAGGTCGATGCAGGCTTGCTTAGACGGGGAGGATAGTGAATTGG TGATTGAAATGGTTGGTAATGACAATGAGCAATTGCAACTCGATGCGATGATGAACAACT TGTCAGGGTTGATTGATGATGCTAGTGCCTGTGTAATGTCGGCGCAGAGCTGTGGAGTAT CTGGAGATAAACTGCAGAGTGATGACAGAGTAGCTGAGGAGGTGAAAGAATTGGGAGCTG GGATTGGCAATGACAGATCTGTGTGCAGTTTAGATCATGGGTCACTGGATGGTGGTGGTG GTTTTGAGGAAGGAGAGATTGAGGGCGACACGCAGAATTTAGATGCAGATGATTCTGGCA ATTCAGAGCTTCAAGATGATGTGGAATTGGAAGAGGATTTTGATAGCAGAAGGATAGAGG AGGATGGGTCATGTGGCCATGACTTAAAGAGCAATTTGCATTTGATACCTCAAAAAGGAA ATGGCGACACTGCACGGAACATGCTATGTAATAGCAAGGGTGATTCTCAAATGCATGTTG CCAGGGCGCAAGCAGTCAGTTATGATGAAGTTCTCGATTGGAATGAGACACCTTTGCCTG ATGATAAGGCTCTCAAACATGGAAACACAAGAAAGCGCACCTTGACAGAGGAGAGAAAAG CTAAGAAGACGAAAACTAAACGAATTAAGAGAGCATTGCAACGGGAAGCCGAAGGGGTGA AAAGACTGAAACTTCAACCAGTTATAAAGCCTAAAGTGGTGAAGGTTTGCCACTTCTACT TGCATGGGAAGTGCCAGCAGGGCAATTTGTGCAAGTTCTCCCATGATACGACACCTTTGA CAAAATCTAAGCCCTGCACGCATTATGCACGTGGTTCTTGTTTGAAAGGAGATGATTGCC CTTATGATCATGAGTTGTCAAAGTACCCTTGCCACAATTTTATGGAAAATGGAATGTGCA TCAGAGGTGATAAATGCAAATTTTCTCATGTGATACCAACTGCAGAAGGTCCGTCCACAT CAGATGCAAAGAAATCTAATGCGTCATCAGTACCTGAAAAAGCAAATTGCCAAGAGCAAA CAAGTCGTCAGAAAACTTCGACAGTATACAGTGGTGAACCTGCAACCTCTGTTCCTATCA AACATCATTCCATCCTTAAAAACCTTGCTGGCATATCAGGAAATGCTCAAAAGGTACCTA TTCGTATACCAAGGGGTATACAGTTTCTTCCTTTCAATAAAGCCAGACCAGATTCTAGCA TTTTGCATCAGGATGTTGTGTCCACTGAGAAGCATAAGAATCCAACTGGTGGTCCACATC AGAACTTTGGAAGACCTCAACCCGCAGACGGGAAAAAACTTGGCAAGCACAATGGACATA GATCAGCTNCACTGGTGGATGAAAATGACTCATCAAAACAAGCTAATCTACATTCATGGT TCAGAANCAAAGAAAAATAGNTTGNCTACCACTGGNTGCAGNGNCCAGCTCAGTAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)