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Oryza sativa
cluster # 3124 cluster # 3124       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3124#0 length = 1412 sequences # 2  

consensusID : consensus_3124#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1412
fasta sequence
                              [CAACCAGCCCACTCTGCTATTCCATCTGCGTGAGAGAGAGAAAGAGGGGAGGGGAGAGAGATTTGTGGCGTCGTGGGTGCTCGGTTGCGGCGGTTACCGCGGGGAGGAGGAGGGAGTTGTGCTGTTGGGGGTTTGGATCTAGAGCGAGCATAGGATGGGAGCTGCTGGCTCCTGAGCTGCGCCGCGCGTTGCCCTCCGGGAGATGAAATTCGATAAGAATCAAAGCTTCACAACATCTACTGCGAAATTGGATAGGAATCAAAGCTTCACAACATCTACTGTGAAATTGGATAAGAACCAAAGCTTGTTATTTTCTCGTGGATAGCAGACATCATGGGTACTGGATCAGTTACCGTGAAACAAAAGAAGCGAGTAAAGCACACTAAGAACAAGTACTTGAAACCTGGTGCTCTCGCCCAGATTCGTTATAGCAGGAGCACAAGCAGGGATATAGGAAAGAAAAGGATTCTGTTGAATGTGGATAAGGATGAGTTACCGCAGGAGGAGGTTGCATTCGAAAACACTGAACCTATGATGTCGCCTAAAAGGCTCAACTTTGAGCCATTTAGTGGAACTAAGGGGCAGGTAATGCCAATAACTCCAAAGACTCCTCAGTCAGATGAATTATCTGATGGTCATTCAAGACTTGAATCACTTCCACTTGAATTGCTGATCAAGATCATTTGTTGCTTGCACCATGATCAGCTGAATATTGTTTTCCATGTTTCAAAAAGGATCCGGAAGGCAGTTGAATTGGCGAGGCAGTACCATTTTAACTACACTACCCCAGATCGAAGCAGACAGGAACTACTCCAGCACACCACTCCTCTTCCAACAGAACATTGGCCTTTCATGAGCAGGATTGATGGCAAGGATGTGCGGATTTCTACCCCAAGAACCCCAAAGGCTCCAAAACATGCTCCTCGGCTTGCGCGCCTTGAGCTGCTTGATTTCAAGCCAATCACTGCTGTTCTTTTCCCAGACACATTTCCTTCAAAACGTCTGCGCCGTTCAATGCCACCAGGATTGCCAAGGCCTGTGTCCAAAGCTGCATCCTCGACTAGAGTTTTACTGTATGAGGAGGAGCTTTGCGAAGCGGTGGCACAGAATAAGCTTCTTTGAAGCTGCAATGACCTTTAGGCACAACCAGCAATATGTTATTGCTTCCATCTCATAATGTACATGATTATCTATGTCAATTCCCTAGCATGAGTTTTGTTTGGTTAGGCAGTTTTAGACTAGTATTTTTTTGAAGAACGTTTTAGACTAGTCATTAGCATGTTATATAGTAAGAAGAATCTAGTTTGGTTTATTCCCTGGTCTGTATATAGTAAATGTACTGGTAAACTATTTATAGCTAATAATTTGCTTGCAGAAATGATGTTTATTTTTTGCCTATGTTCTAAAAAAAA]

[+] EMBL AK103093             [CAACCAGCCCACTCTGCTATTCCATCTGCGTGAGAGAGAGAAAGAGGGGAGGGGAGAGAGATTTGTGGCGTCGTGGGTGCTCGGTTGCGGCGGTTACCGCGGGGAGGAGGAGGGAGTTGTGCTGTTGGGGGTTTGGATCTAGAGCGAGCATAGGATGGGAGCTGCTGGCTCCTGAGCTGCGCCGCGCGTTGCCCTCCGGGAGATGAAATTCGATAAGAATCAAAGCTTCACAACATCTACTGCGAAATTGGATAGGAATCAAAGCTTCACAACATCTACTGTGAAATTGGATAAGAACCAAAGCTTGTTATTTTCTCGTGGATAGCAGACATCATGGGTACTGGATCAGTTACCGTGAAACAAAAGAAGCGAGTAAAGCACACTAAGAACAAGTACTTGAAACCTGGTGCTCTCGCCCAGATTCGTTATAGCAGGAGCACAAGCAGGGATATAGGAAAGAAAAGGATTCTGTTGAATGTGGATAAGGATGAGTTACCGCAGGAGGAGGTTGCATTCGAAAACACTGAACCTATGATGTCGCCTAAAAGGCTCAACTTTGAGCCATTTAGTGGAACTAAGGGGCAGGTAATGCCAATAACTCCAAAGACTCCTCAGTCAGATGAATTATCTGATGGTCATTCAAGACTTGAATCACTTCCACTTGAATTGCTGATCAAGATCATTTGTTGCTTGCACCATGATCAGCTGAATATTGTTTTCCATGTTTCAAAAAGGATCCGGAAGGCAGTTGAATTGGCGAGGCAGTACCATTTTAACTACACTACCCCAGATCGAAGCAGACAGGAACTACTCCAGCACACCACTCCTCTTCCAACAGAACATTGGCCTTTCATGAGCAGGATTGATGGCAAGGATGTGCGGATTTCTACCCCAAGAACCCCAAAGGCTCCAAAACATGCTCCTCGGCTTGCGCGCCTTGAGCTGCTTGATTTCAAGCCAATCACTGCTGTTCTTTTCCCAGACACATTTCCTTCAAAACGTCTGCGCCGTTCAATGCCACCAGGATTGCCAAGGCCTGTGTCCAAAGCTGCATCCTCGACTAGAGTTTTACTGTATGAGGAGGAGCTTTGCGAAGCGGTGGCACAGAATAAGCTTCTTTGAAGCTGCAATGACCTTTAGGCACAACCAGCAATATGTTATTGCTTCCATCTCATAATGTACATGATTATCTATGTCAATTCCCTAGCATGAGTTTTGTTTGGTTAGGCAGTTTTAGACTAGTATTTTTTTGAAGAACGTTTTAGACTAGTCATTAGCATGTTATATAGTAAGAAGAATCTAGTTTGGTTTATTCCCTGGTCTGTATATAGTAAATGTACTGGTAAACTATTTATAGCTAATAATTTGCTTGCAGA                                    ]
[+] EMBL BI803511             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTCATGACCAGGATTGATGCCAAGAAT TCCGGATTTCTACCCCAAGAACCCCAAAGGCTCC AAACATGCTCCTCGGCTTGCGCCCCTTGA CTGCTTGATTTCAA CC ATCACTGCTGTTCTTTTCCCAGACACATTTCCTTC AAACGTCTGCGCCGTTCAATGCCACCAGGATTGCC AGGCCTGTGTCCAAAGCTGCATCCTCGACTAGAGTTTTACTGTATGAGGAGGAGCTTTGCGAAGCGGTGGCACAGAATAAGCTTCTTTGAAGCTGCAATGACCTTTAGGCACAACCAGCAATATGTTATTGCTTCCATCTCATAATGTACATGATTATCTATGTCAATTCCCTAGCATGAGTTTTGTTTGGTTAGGCAGTTTTAGACTAGTATTTTTTTGAAGAACGTTTTAGACTAGTCATTAGCATGTTATATAGTAAGAAGAATCTAGTTTGGTTTATTCCCTGGTCTGTATATAGTAAATGTACTGGTAAACTATTTATAGCTAATAATTTGCTTGCAGAAATGATGTTTATTTTTTGCCTATGTTCTAAAAAAAA]


>consensus_3124#0 CAACCAGCCCACTCTGCTATTCCATCTGCGTGAGAGAGAGAAAGAGGGGAGGGGAGAGAG ATTTGTGGCGTCGTGGGTGCTCGGTTGCGGCGGTTACCGCGGGGAGGAGGAGGGAGTTGT GCTGTTGGGGGTTTGGATCTAGAGCGAGCATAGGATGGGAGCTGCTGGCTCCTGAGCTGC GCCGCGCGTTGCCCTCCGGGAGATGAAATTCGATAAGAATCAAAGCTTCACAACATCTAC TGCGAAATTGGATAGGAATCAAAGCTTCACAACATCTACTGTGAAATTGGATAAGAACCA AAGCTTGTTATTTTCTCGTGGATAGCAGACATCATGGGTACTGGATCAGTTACCGTGAAA CAAAAGAAGCGAGTAAAGCACACTAAGAACAAGTACTTGAAACCTGGTGCTCTCGCCCAG ATTCGTTATAGCAGGAGCACAAGCAGGGATATAGGAAAGAAAAGGATTCTGTTGAATGTG GATAAGGATGAGTTACCGCAGGAGGAGGTTGCATTCGAAAACACTGAACCTATGATGTCG CCTAAAAGGCTCAACTTTGAGCCATTTAGTGGAACTAAGGGGCAGGTAATGCCAATAACT CCAAAGACTCCTCAGTCAGATGAATTATCTGATGGTCATTCAAGACTTGAATCACTTCCA CTTGAATTGCTGATCAAGATCATTTGTTGCTTGCACCATGATCAGCTGAATATTGTTTTC CATGTTTCAAAAAGGATCCGGAAGGCAGTTGAATTGGCGAGGCAGTACCATTTTAACTAC ACTACCCCAGATCGAAGCAGACAGGAACTACTCCAGCACACCACTCCTCTTCCAACAGAA CATTGGCCTTTCATGAGCAGGATTGATGGCAAGGATGTGCGGATTTCTACCCCAAGAACC CCAAAGGCTCCAAAACATGCTCCTCGGCTTGCGCGCCTTGAGCTGCTTGATTTCAAGCCA ATCACTGCTGTTCTTTTCCCAGACACATTTCCTTCAAAACGTCTGCGCCGTTCAATGCCA CCAGGATTGCCAAGGCCTGTGTCCAAAGCTGCATCCTCGACTAGAGTTTTACTGTATGAG GAGGAGCTTTGCGAAGCGGTGGCACAGAATAAGCTTCTTTGAAGCTGCAATGACCTTTAG GCACAACCAGCAATATGTTATTGCTTCCATCTCATAATGTACATGATTATCTATGTCAAT TCCCTAGCATGAGTTTTGTTTGGTTAGGCAGTTTTAGACTAGTATTTTTTTGAAGAACGT TTTAGACTAGTCATTAGCATGTTATATAGTAAGAAGAATCTAGTTTGGTTTATTCCCTGG TCTGTATATAGTAAATGTACTGGTAAACTATTTATAGCTAATAATTTGCTTGCAGAAATG ATGTTTATTTTTTGCCTATGTTCTAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)