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Oryza sativa
cluster # 3131 cluster # 3131       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3131#0 length = 1900 sequences # 1  
consensus_3131#1 length = 1842 sequences # 1  

consensusID : consensus_3131#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1900
fasta sequence
                              [CTCCTCCACCACCACCCTCTCCCCTACCAACAGGGTGCTCCTCCTCTCACGCCAACCCCCAGACTCTCGTTACCATCGAGAGCCTACCAAGCAGACACACCAGGTAGCTGAACGCTCACCTGCCTGCTTACGACCAACACCCGAGGAGCCAATTTCGCGGCACAAACACTCCTCCCTTCCCTCCCACAAGATGCCTTCGCATCAGCCCGTCGCCGGCATGTCCGCCGTGGACCCGGCCTACCTCTCCAGCCAGCCTTCGGCTGCGTCCAAGCCTCACCCTCAAGAGCCCGTCAGGAACAAGGCCTACGACCCCAAGAAGCCTCACATCACTGAGACTCCCATGACAAAGAAGAACTGGTACAAGCACGTCAACTGGCTCAATGTCATCCTCATCGTTGGCATTCCCATGTGTGGTCTCGTTGCCGCTTACTGGACACCTCTCTACCTGAAGACTGCCATTTGGGCCGTTGCCTTCTACTTCGCCACTGGCCTCGGTATCACCGCCGGCTACCACCGTCTGTGGGCGCACACCTCCTACTCTGCCAGCCTCCCGCTCAAGATCTTCCTCGCTGCTGTTGGTGGCGGTGCCGTTGAGGGCTCCATCAGATGGTGGGCCCGCGACCACCGCGCTCACCACCGCTACACCGACACCGACAAGGACCCCTACAGCGTCAGGAAGGGTCTTCTCTACTCTCACTTCGGCTGGATGCTCATGAAGCAGAACCCCAAGAGAATTGGCCGCACTGACATCTCCGACCTCAACGACGACGCCGTTGTTGTCTGGCAGCACAAGAACTACCTCAAGGTCGTTCTCTTCATGGGTCTCATCTTCCCGACTCTTGTTGCAGGTCTCGGCTGGGGTGACTGGCTCGGAGGCTTCGTCTATGCCGGTATCCTCCGCATCTTCTTCGTCCAGCAGGCTACTTTCTGTGTCAACTCCCTTGCCCACTGGCTCGGTGACCAGCCCTTCGACGACCGCAACTCTCCTCGTGACCACGTCATCACTGCCCTTGTCACTCTCGGTGAGGGCTACCACAACTTCCACCACGAGTTCCCCTCCGACTACCGCAACGCTATCGAGTGGCACCAGTATGACCCCACCAAGTGGTCTATCTGGATGTGGAAGCAGATGGGTCTCGCCTACGATCTCAAGCAGTTCCGTTCCAACGAGATTGAGAAGGGCCGTCTCCAGCAGCAACAGAAGAAGCTTGACCAGAAGCGCTCCAAGCTCGACTGGGGCGTTCCTCTTGAGCAGCTCCCCGTCATGGAGTGGGACGACTACGTGGACCAGGCTAAGAACGGCCGTGGCTTGATTGCCGTCGCCGGTGTCGTTCACGATGTTACCGACTTCATCAACGACCACCCCGGTGGAAAGGCCATGATCAAGTCTGGTATTGGCAAGGATGCCACAGCCATGTTCAACGGCGGTGTCTACTACCACTCCAACGCTGCCCACAACCTTCTCTCCACCATGCGCGTCGGTGTCATCCGTGGCGGCATGGAGGTCGAGATCTGGAAGCGCGCCCATGGCGAGAACAAGGACTTCATCAAGGATGCCGCAGGCAACCGCATCGTGCGTGCTGGCGCGCAGGTGACCAAGGTCGTCGAGCCTCCCGCGAGCGCCGGCACCGCATAGATGATGACGGTCAAGTCGAGCAGAAGAAACTGAGACGAATGCATGCAAATGTTACATGGCGCGTTTAGCGAGTGGCCTGGGTTCTCCGCCTACTTTTGGAGAGAGGCAGGCGTTGTTTCACATTTTTTATGGGGCTTTTACACCTACACATTCGCTGTACATAGATTTCCTACTCACGCCACCTACGGGGTGCGATGATAGAGCTTAGCTATGAGCTTAGTTTGGTGGACTAGTTAGCTAATCAGGTCGAAATCATAATGTACT]

[+] EMBL AK107670             [CTCCTCCACCACCACCCTCTCCCCTACCAACAGGGTGCTCCTCCTCTCACGCCAACCCCCAGACTCTCGTTACCATCGAGAGCCTACCAAGCAGACACACCAGGTAGCTGAACGCTCACCTGCCTGCTTACGACCAACACCCGAGGAGCCAATTTCGCGGCACAAACACTCCTCCCTTCCCTCCCACAAGATGCCTTCGCATCAGCCCGTCGCCGGCATGTCCGCCGTGGACCCGGCCTACCTCTCCAGCCAGCCTTCGGCTGCGTCCAAGCCTCACCCTCAAGAGCCCGTCAGGAACAAGGCCTACGACCCCAAGAAGCCTCACATCACTGAGACTCCCATGACAAAGAAGAACTGGTACAAGCACGTCAACTGGCTCAATGTCATCCTCATCGTTGGCATTCCCATGTGTGGTCTCGTTGCCGCTTACTGGACACCTCTCTACCTGAAGACTGCCATTTGGGCCGTTGCCTTCTACTTCGCCACTGGCCTCGGTATCACCGCCGGCTACCACCGTCTGTGGGCGCACACCTCCTACTCTGCCAGCCTCCCGCTCAAGATCTTCCTCGCTGCTGTTGGTGGCGGTGCCGTTGAGGGCTCCATCAGATGGTGGGCCCGCGACCACCGCGCTCACCACCGCTACACCGACACCGACAAGGACCCCTACAGCGTCAGGAAGGGTCTTCTCTACTCTCACTTCGGCTGGATGCTCATGAAGCAGAACCCCAAGAGAATTGGCCGCACTGACATCTCCGACCTCAACGACGACGCCGTTGTTGTCTGGCAGCACAAGAACTACCTCAAGGTCGTTCTCTTCATGGGTCTCATCTTCCCGACTCTTGTTGCAGGTCTCGGCTGGGGTGACTGGCTCGGAGGCTTCGTCTATGCCGGTATCCTCCGCATCTTCTTCGTCCAGCAGGCTACTTTCTGTGTCAACTCCCTTGCCCACTGGCTCGGTGACCAGCCCTTCGACGACCGCAACTCTCCTCGTGACCACGTCATCACTGCCCTTGTCACTCTCGGTGAGGGCTACCACAACTTCCACCACGAGTTCCCCTCCGACTACCGCAACGCTATCGAGTGGCACCAGTATGACCCCACCAAGTGGTCTATCTGGATGTGGAAGCAGATGGGTCTCGCCTACGATCTCAAGCAGTTCCGTTCCAACGAGATTGAGAAGGGCCGTCTCCAGCAGCAACAGAAGAAGCTTGACCAGAAGCGCTCCAAGCTCGACTGGGGCGTTCCTCTTGAGCAGCTCCCCGTCATGGAGTGGGACGACTACGTGGACCAGGCTAAGAACGGCCGTGGCTTGATTGCCGTCGCCGGTGTCGTTCACGATGTTACCGACTTCATCAACGACCACCCCGGTGGAAAGGCCATGATCAAGTCTGGTATTGGCAAGGATGCCACAGCCATGTTCAACGGCGGTGTCTACTACCACTCCAACGCTGCCCACAACCTTCTCTCCACCATGCGCGTCGGTGTCATCCGTGGCGGCATGGAGGTCGAGATCTGGAAGCGCGCCCATGGCGAGAACAAGGACTTCATCAAGGATGCCGCAGGCAACCGCATCGTGCGTGCTGGCGCGCAGGTGACCAAGGTCGTCGAGCCTCCCGCGAGCGCCGGCACCGCATAGATGATGACGGTCAAGTCGAGCAGAAGAAACTGAGACGAATGCATGCAAATGTTACATGGCGCGTTTAGCGAGTGGCCTGGGTTCTCCGCCTACTTTTGGAGAGAGGCAGGCGTTGTTTCACATTTTTTATGGGGCTTTTACACCTACACATTCGCTGTACATAGATTTCCTACTCACGCCACCTACGGGGTGCGATGATAGAGCTTAGCTATGAGCTTAGTTTGGTGGACTAGTTAGCTAATCAGGTCGAAATCATAATGTACT]


>consensus_3131#0 CTCCTCCACCACCACCCTCTCCCCTACCAACAGGGTGCTCCTCCTCTCACGCCAACCCCC AGACTCTCGTTACCATCGAGAGCCTACCAAGCAGACACACCAGGTAGCTGAACGCTCACC TGCCTGCTTACGACCAACACCCGAGGAGCCAATTTCGCGGCACAAACACTCCTCCCTTCC CTCCCACAAGATGCCTTCGCATCAGCCCGTCGCCGGCATGTCCGCCGTGGACCCGGCCTA CCTCTCCAGCCAGCCTTCGGCTGCGTCCAAGCCTCACCCTCAAGAGCCCGTCAGGAACAA GGCCTACGACCCCAAGAAGCCTCACATCACTGAGACTCCCATGACAAAGAAGAACTGGTA CAAGCACGTCAACTGGCTCAATGTCATCCTCATCGTTGGCATTCCCATGTGTGGTCTCGT TGCCGCTTACTGGACACCTCTCTACCTGAAGACTGCCATTTGGGCCGTTGCCTTCTACTT CGCCACTGGCCTCGGTATCACCGCCGGCTACCACCGTCTGTGGGCGCACACCTCCTACTC TGCCAGCCTCCCGCTCAAGATCTTCCTCGCTGCTGTTGGTGGCGGTGCCGTTGAGGGCTC CATCAGATGGTGGGCCCGCGACCACCGCGCTCACCACCGCTACACCGACACCGACAAGGA CCCCTACAGCGTCAGGAAGGGTCTTCTCTACTCTCACTTCGGCTGGATGCTCATGAAGCA GAACCCCAAGAGAATTGGCCGCACTGACATCTCCGACCTCAACGACGACGCCGTTGTTGT CTGGCAGCACAAGAACTACCTCAAGGTCGTTCTCTTCATGGGTCTCATCTTCCCGACTCT TGTTGCAGGTCTCGGCTGGGGTGACTGGCTCGGAGGCTTCGTCTATGCCGGTATCCTCCG CATCTTCTTCGTCCAGCAGGCTACTTTCTGTGTCAACTCCCTTGCCCACTGGCTCGGTGA CCAGCCCTTCGACGACCGCAACTCTCCTCGTGACCACGTCATCACTGCCCTTGTCACTCT CGGTGAGGGCTACCACAACTTCCACCACGAGTTCCCCTCCGACTACCGCAACGCTATCGA GTGGCACCAGTATGACCCCACCAAGTGGTCTATCTGGATGTGGAAGCAGATGGGTCTCGC CTACGATCTCAAGCAGTTCCGTTCCAACGAGATTGAGAAGGGCCGTCTCCAGCAGCAACA GAAGAAGCTTGACCAGAAGCGCTCCAAGCTCGACTGGGGCGTTCCTCTTGAGCAGCTCCC CGTCATGGAGTGGGACGACTACGTGGACCAGGCTAAGAACGGCCGTGGCTTGATTGCCGT CGCCGGTGTCGTTCACGATGTTACCGACTTCATCAACGACCACCCCGGTGGAAAGGCCAT GATCAAGTCTGGTATTGGCAAGGATGCCACAGCCATGTTCAACGGCGGTGTCTACTACCA CTCCAACGCTGCCCACAACCTTCTCTCCACCATGCGCGTCGGTGTCATCCGTGGCGGCAT GGAGGTCGAGATCTGGAAGCGCGCCCATGGCGAGAACAAGGACTTCATCAAGGATGCCGC AGGCAACCGCATCGTGCGTGCTGGCGCGCAGGTGACCAAGGTCGTCGAGCCTCCCGCGAG CGCCGGCACCGCATAGATGATGACGGTCAAGTCGAGCAGAAGAAACTGAGACGAATGCAT GCAAATGTTACATGGCGCGTTTAGCGAGTGGCCTGGGTTCTCCGCCTACTTTTGGAGAGA GGCAGGCGTTGTTTCACATTTTTTATGGGGCTTTTACACCTACACATTCGCTGTACATAG ATTTCCTACTCACGCCACCTACGGGGTGCGATGATAGAGCTTAGCTATGAGCTTAGTTTG GTGGACTAGTTAGCTAATCAGGTCGAAATCATAATGTACT



consensusID : consensus_3131#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1842
fasta sequence
                              [CCTCTTGCTCACCTACACCTTTCCTTCCACCTCGTCATTCACTCGAGCGTGGTGAAGTCTCCGCTTGCTGTCGCTGCTGGAGCTTCCTTCTGTGCAAACCTGAAGCTGACCGGAGCTCACTTTTTTTTGAGCGGCTAGTCACTTCGCACTCTCACTACCTCTTATCGCCACCTTTCACTCATCAAAATGCCTTCTCACCAGCCTGTCGCCGGCATGCAGGCCATTGACCCCGACTACGTCAAGCAGCCGTCTTCCATGGCGAGCACCTCGGAGCCAAACCGCAATCCCAAATACGACCCTAAGAAGCCACACATCACCGATCTCCCCATCACTCGGTCAAACTGGTACAAGCATGTCAATTGGCTCAACGTCATCTTCATCATCGGTATGCCTCTCGCTGGCTGCATCGCCGCCTTCTGGACCCCTTTGCAGTGGAAGACGGCTGTTTGGGCTGTCGTCTACTACTTCTGGACTGGTCTCGGAATCACCGCCGGATACCATCGTCTCTGGGCTCACAAGTCATACAACGCCAGCCTGCCCCTGCGAATCTTCCTCGCCGCAGTTGGTGCCGGTGCTGTTGAGGACTCCATCCGCTGGCGGAGCCGTGACCACCGCGCCCACCACCGCTACACCGACACCAACAAGGACCCCTACAGCGTCCGCAAGGGCCTTCTCTACAGCCATCTCGGCTGGATGGTCATGAAGCAGAACCCCAAGCGTATCGGCCGCACCGACATCACCGACCTCAACGAGGACCCCGTCGTTGTCTGGCAGCACAAGAACTACATCAAGTCTGTCGTCTTCATGGGCCTGGTCTCCCCAACTCTTGTTTCTGGTCTCTTCTGGGGTGACTGGATGGGTGGATACATCTACGCCGGTATCCTCCGCATCTTCTTCGTCCAACAGGCTACTTTCTGCGTCAACTCGCTTGCCCACTGGCTCGGCGAACAGCCGTTTGACGACCGCAACAGCCCCAGAGACCACGTCATCACCGCACTTGTTACCCTTGGCGAGGGTTACCACAACTTCCATCACGAGTTCCCCTCCGACTACCGTAACGCCATCGAGTGGCACCAGTACGACCCCACCAAGTGGTCCATCTGGCTCTGGAGCAAGCTCGGCCTCGCCTCCAACCTCAAGCAGTTCCGTTCCAACGAAATCGAAAAGGGTCGTGTCCAGCAACTCCAGAAGAAGATTGACCAGAAGCGCGCCAAGCTCGACTGGGGTGTTCCTCTTGACCAGCTTCCCGTTATCGAGTGGGACGACTATGTTGAGCAAGCTAAGAACGGACGTGGTTTGATTGCTGTCGCTGGTGTTGTCCACGACGTCACCGACTTCATTAATGAGCACCCCGGTGGCAAGACTCTCATCAAGAGTGGCATTGGCAAGGACGCTACTGCCATGTTCAATGGTGGCGTCTACTTCCACTCCAACGCCGGCCACAACTTGCTCTCTACCATGAGAGTTGGTGTTATCCGTGGTGGATGTGAAGTCGAGATCTGGAAGCGCGCCCAACGGGAGAATAAGGATGTTGGTCTGGTCAAGGACAACCAAGGCAACCCAATCATCAGGGCGGGCAACCAGATTACCAAGGTTGCACAACCCATCGAGAGTGCTAGTGCAGCGTAGATGGGTATTCCCTTTTTAATTTTTATGAGCGATGCATGGCGTTAGGGATGTTCTCTTCCTAGGCGGACAGAGTAATTTATCGATTTCAGAGCGTTCGTTTGACGAGCATCATGAGGATGCTCAGTCACAATTAGACGGCGTATGTTCACAGCCTTGCTCGAGCGAGAGGCTTTTGAAAAGTAGTCTTATGACCCAATCAGAATGAAATTGACA]

[+] EMBL AK108952             [CCTCTTGCTCACCTACACCTTTCCTTCCACCTCGTCATTCACTCGAGCGTGGTGAAGTCTCCGCTTGCTGTCGCTGCTGGAGCTTCCTTCTGTGCAAACCTGAAGCTGACCGGAGCTCACTTTTTTTTGAGCGGCTAGTCACTTCGCACTCTCACTACCTCTTATCGCCACCTTTCACTCATCAAAATGCCTTCTCACCAGCCTGTCGCCGGCATGCAGGCCATTGACCCCGACTACGTCAAGCAGCCGTCTTCCATGGCGAGCACCTCGGAGCCAAACCGCAATCCCAAATACGACCCTAAGAAGCCACACATCACCGATCTCCCCATCACTCGGTCAAACTGGTACAAGCATGTCAATTGGCTCAACGTCATCTTCATCATCGGTATGCCTCTCGCTGGCTGCATCGCCGCCTTCTGGACCCCTTTGCAGTGGAAGACGGCTGTTTGGGCTGTCGTCTACTACTTCTGGACTGGTCTCGGAATCACCGCCGGATACCATCGTCTCTGGGCTCACAAGTCATACAACGCCAGCCTGCCCCTGCGAATCTTCCTCGCCGCAGTTGGTGCCGGTGCTGTTGAGGACTCCATCCGCTGGCGGAGCCGTGACCACCGCGCCCACCACCGCTACACCGACACCAACAAGGACCCCTACAGCGTCCGCAAGGGCCTTCTCTACAGCCATCTCGGCTGGATGGTCATGAAGCAGAACCCCAAGCGTATCGGCCGCACCGACATCACCGACCTCAACGAGGACCCCGTCGTTGTCTGGCAGCACAAGAACTACATCAAGTCTGTCGTCTTCATGGGCCTGGTCTCCCCAACTCTTGTTTCTGGTCTCTTCTGGGGTGACTGGATGGGTGGATACATCTACGCCGGTATCCTCCGCATCTTCTTCGTCCAACAGGCTACTTTCTGCGTCAACTCGCTTGCCCACTGGCTCGGCGAACAGCCGTTTGACGACCGCAACAGCCCCAGAGACCACGTCATCACCGCACTTGTTACCCTTGGCGAGGGTTACCACAACTTCCATCACGAGTTCCCCTCCGACTACCGTAACGCCATCGAGTGGCACCAGTACGACCCCACCAAGTGGTCCATCTGGCTCTGGAGCAAGCTCGGCCTCGCCTCCAACCTCAAGCAGTTCCGTTCCAACGAAATCGAAAAGGGTCGTGTCCAGCAACTCCAGAAGAAGATTGACCAGAAGCGCGCCAAGCTCGACTGGGGTGTTCCTCTTGACCAGCTTCCCGTTATCGAGTGGGACGACTATGTTGAGCAAGCTAAGAACGGACGTGGTTTGATTGCTGTCGCTGGTGTTGTCCACGACGTCACCGACTTCATTAATGAGCACCCCGGTGGCAAGACTCTCATCAAGAGTGGCATTGGCAAGGACGCTACTGCCATGTTCAATGGTGGCGTCTACTTCCACTCCAACGCCGGCCACAACTTGCTCTCTACCATGAGAGTTGGTGTTATCCGTGGTGGATGTGAAGTCGAGATCTGGAAGCGCGCCCAACGGGAGAATAAGGATGTTGGTCTGGTCAAGGACAACCAAGGCAACCCAATCATCAGGGCGGGCAACCAGATTACCAAGGTTGCACAACCCATCGAGAGTGCTAGTGCAGCGTAGATGGGTATTCCCTTTTTAATTTTTATGAGCGATGCATGGCGTTAGGGATGTTCTCTTCCTAGGCGGACAGAGTAATTTATCGATTTCAGAGCGTTCGTTTGACGAGCATCATGAGGATGCTCAGTCACAATTAGACGGCGTATGTTCACAGCCTTGCTCGAGCGAGAGGCTTTTGAAAAGTAGTCTTATGACCCAATCAGAATGAAATTGACA]


>consensus_3131#1 CCTCTTGCTCACCTACACCTTTCCTTCCACCTCGTCATTCACTCGAGCGTGGTGAAGTCT CCGCTTGCTGTCGCTGCTGGAGCTTCCTTCTGTGCAAACCTGAAGCTGACCGGAGCTCAC TTTTTTTTGAGCGGCTAGTCACTTCGCACTCTCACTACCTCTTATCGCCACCTTTCACTC ATCAAAATGCCTTCTCACCAGCCTGTCGCCGGCATGCAGGCCATTGACCCCGACTACGTC AAGCAGCCGTCTTCCATGGCGAGCACCTCGGAGCCAAACCGCAATCCCAAATACGACCCT AAGAAGCCACACATCACCGATCTCCCCATCACTCGGTCAAACTGGTACAAGCATGTCAAT TGGCTCAACGTCATCTTCATCATCGGTATGCCTCTCGCTGGCTGCATCGCCGCCTTCTGG ACCCCTTTGCAGTGGAAGACGGCTGTTTGGGCTGTCGTCTACTACTTCTGGACTGGTCTC GGAATCACCGCCGGATACCATCGTCTCTGGGCTCACAAGTCATACAACGCCAGCCTGCCC CTGCGAATCTTCCTCGCCGCAGTTGGTGCCGGTGCTGTTGAGGACTCCATCCGCTGGCGG AGCCGTGACCACCGCGCCCACCACCGCTACACCGACACCAACAAGGACCCCTACAGCGTC CGCAAGGGCCTTCTCTACAGCCATCTCGGCTGGATGGTCATGAAGCAGAACCCCAAGCGT ATCGGCCGCACCGACATCACCGACCTCAACGAGGACCCCGTCGTTGTCTGGCAGCACAAG AACTACATCAAGTCTGTCGTCTTCATGGGCCTGGTCTCCCCAACTCTTGTTTCTGGTCTC TTCTGGGGTGACTGGATGGGTGGATACATCTACGCCGGTATCCTCCGCATCTTCTTCGTC CAACAGGCTACTTTCTGCGTCAACTCGCTTGCCCACTGGCTCGGCGAACAGCCGTTTGAC GACCGCAACAGCCCCAGAGACCACGTCATCACCGCACTTGTTACCCTTGGCGAGGGTTAC CACAACTTCCATCACGAGTTCCCCTCCGACTACCGTAACGCCATCGAGTGGCACCAGTAC GACCCCACCAAGTGGTCCATCTGGCTCTGGAGCAAGCTCGGCCTCGCCTCCAACCTCAAG CAGTTCCGTTCCAACGAAATCGAAAAGGGTCGTGTCCAGCAACTCCAGAAGAAGATTGAC CAGAAGCGCGCCAAGCTCGACTGGGGTGTTCCTCTTGACCAGCTTCCCGTTATCGAGTGG GACGACTATGTTGAGCAAGCTAAGAACGGACGTGGTTTGATTGCTGTCGCTGGTGTTGTC CACGACGTCACCGACTTCATTAATGAGCACCCCGGTGGCAAGACTCTCATCAAGAGTGGC ATTGGCAAGGACGCTACTGCCATGTTCAATGGTGGCGTCTACTTCCACTCCAACGCCGGC CACAACTTGCTCTCTACCATGAGAGTTGGTGTTATCCGTGGTGGATGTGAAGTCGAGATC TGGAAGCGCGCCCAACGGGAGAATAAGGATGTTGGTCTGGTCAAGGACAACCAAGGCAAC CCAATCATCAGGGCGGGCAACCAGATTACCAAGGTTGCACAACCCATCGAGAGTGCTAGT GCAGCGTAGATGGGTATTCCCTTTTTAATTTTTATGAGCGATGCATGGCGTTAGGGATGT TCTCTTCCTAGGCGGACAGAGTAATTTATCGATTTCAGAGCGTTCGTTTGACGAGCATCA TGAGGATGCTCAGTCACAATTAGACGGCGTATGTTCACAGCCTTGCTCGAGCGAGAGGCT TTTGAAAAGTAGTCTTATGACCCAATCAGAATGAAATTGACA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3131#0      CTCCTCCACCACCACCCTCTCCCCTACCAACAGGGTGCTCCTCCTCTCACGCC-AACCCC 59
consensus_3131#1      CCTCTTGCTCACCTACACCTTTCCTTCCACCTCGTCATTCACTCGAGCGTGGTGAAGTCT 60
                      *  **    ****  *  **  *** *** *  *    **   *   *  *   **  * 

consensus_3131#0      CAGACTCTCGTTACCATCGAGAGCCTACCAAGCAGACACACCAGGTAGCTGAACGCTCAC 119
consensus_3131#1      CCGCTTGCTGTCGCTGCTGGAGCTTCCTTCTGTGCAAACCTGAAGCTGACCGGAGCTCAC 120
                      * *  *   **  *    *            *   * **   * *  *      ******

consensus_3131#0      CTGCCTGCTTACGACCAACACCCGAGGAGCCAATTTCGCGGCACAAACACTCCTCCCTTC 179
consensus_3131#1      TTTTTTTTGAGCGGCTAGTCACTTCG----CACTCTCACTAC-CTCTTATCGCCACCTTT 175
                       *   *     ** * *    *   *    ** * ** *  * *    *   *  **** 

consensus_3131#0      CCTCCCACAAGATGCCTTCGCATCAGCCCGTCGCCGGCATGTCCGCCGTGGACCCGGCCT 239
consensus_3131#1      CACTCATCAAAATGCCTTCTCACCAGCCTGTCGCCGGCATGCAGGCCATTGACCCCGACT 235
                      *   *  *** ******** ** ***** ************   *** * ***** * **

consensus_3131#0      ACCTCTCCAGCCAGCCTTCGGCTGCGTCCAAGCCTCACCCTCAAGAGCCCGTCAGGAACA 299
consensus_3131#1      ACGTC---AAGCAGCCGTCT------TCCATGGCGAGCACCTCGGAGCCAAACCGCAATC 286
                      ** **   *  ***** **       **** * *   * *    *****   * * **  

consensus_3131#0      AGGCCTACGACCCCAAGAAGCCTCACATCACTGAGACTCCCATGACAAAGAAGAACTGGT 359
consensus_3131#1      CCAAATACGACCCTAAGAAGCCACACATCACCGATCTCCCCATCACTCGGTCAAACTGGT 346
                           ******** ******** ******** **    ***** **   *   *******

consensus_3131#0      ACAAGCACGTCAACTGGCTCAATGTCATCCTCATCGTTGGCATTCCCATGTGTGGTCTCG 419
consensus_3131#1      ACAAGCATGTCAATTGGCTCAACGTCATCTTCATCATCGGTATGCCTCTCGCTGGCTGCA 406
                      ******* ***** ******** ****** ***** * ** ** **  *   ***   * 

consensus_3131#0      TTGCCGCTTACTGGACACCTCTCTACCTGAAGACTGCCATTTGGGCCGTTGCCTTCTACT 479
consensus_3131#1      TCGCCGCCTTCTGGACCCCTTTGCAGTGGAAGACGGCTGTTTGGGCTGTCGTCTACTACT 466
                      * ***** * ****** *** *  *   ****** **  ******* ** * ** *****

consensus_3131#0      TCGCCACTGGCCTCGGTATCACCGCCGGCTACCACCGTCTGTGGGCGCACACCTCCTACT 539
consensus_3131#1      TCTGGACTGGTCTCGGAATCACCGCCGGATACCATCGTCTCTGGGCTCACAAGTCATACA 526
                      **   ***** ***** *********** ***** ***** ***** ****  ** *** 

consensus_3131#0      CTGCCAGCCTCCCGCTCAAGATCTTCCTCGCTGCTGTTGGTGGCGGTGCCGTTGAGGGCT 599
consensus_3131#1      ACGCCAGCCTGCCCCTGCGAATCTTCCTCGCCGCAGTTGGTGCCGGTGCTGTTGAGGACT 586
                        ******** ** **    *********** ** ******* ****** ******* **

consensus_3131#0      CCATCAGATGGTGGGCCCGCGACCACCGCGCTCACCACCGCTACACCGACACCGACAAGG 659
consensus_3131#1      CCATCCGCTGGCGGAGCCGTGACCACCGCGCCCACCACCGCTACACCGACACCAACAAGG 646
                      ***** * *** **  *** *********** ********************* ******

consensus_3131#0      ACCCCTACAGCGTCAGGAAGGGTCTTCTCTACTCTCACTTCGGCTGGATGCTCATGAAGC 719
consensus_3131#1      ACCCCTACAGCGTCCGCAAGGGCCTTCTCTACAGCCATCTCGGCTGGATGGTCATGAAGC 706
                      ************** * ***** *********   **  *********** *********

consensus_3131#0      AGAACCCCAAGAGAATTGGCCGCACTGACATCTCCGACCTCAACGACGACGCCGTTGTTG 779
consensus_3131#1      AGAACCCCAAGCGTATCGGCCGCACCGACATCACCGACCTCAACGAGGACCCCGTCGTTG 766
                      *********** * ** ******** ****** ************* *** **** ****

consensus_3131#0      TCTGGCAGCACAAGAACTACCTCAAGGTCGTTCTCTTCATGGGTCTCATCTTCCCGACTC 839
consensus_3131#1      TCTGGCAGCACAAGAACTACATCAAGTCTGTCGTCTTCATGGGCCTGGTCTCCCCAACTC 826
                      ******************** *****   **  ********** **  *** *** ****

consensus_3131#0      TTGTTGCAGGTCTCGGCTGGGGTGACTGGCTCGGAGGCTTCGTCTATGCCGGTATCCTCC 899
consensus_3131#1      TTGTTTCTGGTCTCTTCTGGGGTGACTGGATGGGTGGATACATCTACGCCGGTATCCTCC 886
                      ***** * ******  ************* * ** ** * * **** *************

consensus_3131#0      GCATCTTCTTCGTCCAGCAGGCTACTTTCTGTGTCAACTCCCTTGCCCACTGGCTCGGTG 959
consensus_3131#1      GCATCTTCTTCGTCCAACAGGCTACTTTCTGCGTCAACTCGCTTGCCCACTGGCTCGGCG 946
                      **************** ************** ******** ***************** *

consensus_3131#0      ACCAGCCCTTCGACGACCGCAACTCTCCTCGTGACCACGTCATCACTGCCCTTGTCACTC 1019
consensus_3131#1      AACAGCCGTTTGACGACCGCAACAGCCCCAGAGACCACGTCATCACCGCACTTGTTACCC 1006
                      * ***** ** ************   **  * ************** ** ***** ** *

consensus_3131#0      TCGGTGAGGGCTACCACAACTTCCACCACGAGTTCCCCTCCGACTACCGCAACGCTATCG 1079
consensus_3131#1      TTGGCGAGGGTTACCACAACTTCCATCACGAGTTCCCCTCCGACTACCGTAACGCCATCG 1066
                      * ** ***** ************** *********************** ***** ****

consensus_3131#0      AGTGGCACCAGTATGACCCCACCAAGTGGTCTATCTGGATGTGGAAGCAGATGGGTCTCG 1139
consensus_3131#1      AGTGGCACCAGTACGACCCCACCAAGTGGTCCATCTGGCTCTGGAGCAAGCTCGGCCTCG 1126
                      ************* ***************** ****** * ****   ** * ** ****

consensus_3131#0      CCTACGATCTCAAGCAGTTCCGTTCCAACGAGATTGAGAAGGGCCGTCTCCAGCAGCAAC 1199
consensus_3131#1      CCTCCAACCTCAAGCAGTTCCGTTCCAACGAAATCGAAAAGGGTCGTGTCCAGCAACTCC 1186
                      *** * * *********************** ** ** ***** *** ******* *  *

consensus_3131#0      AGAAGAAGCTTGACCAGAAGCGCTCCAAGCTCGACTGGGGCGTTCCTCTTGAGCAGCTCC 1259
consensus_3131#1      AGAAGAAGATTGACCAGAAGCGCGCCAAGCTCGACTGGGGTGTTCCTCTTGACCAGCTTC 1246
                      ******** ************** **************** *********** ***** *

consensus_3131#0      CCGTCATGGAGTGGGACGACTACGTGGACCAGGCTAAGAACGGCCGTGGCTTGATTGCCG 1319
consensus_3131#1      CCGTTATCGAGTGGGACGACTATGTTGAGCAAGCTAAGAACGGACGTGGTTTGATTGCTG 1306
                      **** ** ************** ** ** ** *********** ***** ******** *

consensus_3131#0      TCGCCGGTGTCGTTCACGATGTTACCGACTTCATCAACGACCACCCCGGTGGAAAGGCCA 1379
consensus_3131#1      TCGCTGGTGTTGTCCACGACGTCACCGACTTCATTAATGAGCACCCCGGTGGCAAGACTC 1366
                      **** ***** ** ***** ** *********** ** ** *********** *** *  

consensus_3131#0      TGATCAAGTCTGGTATTGGCAAGGATGCCACAGCCATGTTCAACGGCGGTGTCTACTACC 1439
consensus_3131#1      TCATCAAGAGTGGCATTGGCAAGGACGCTACTGCCATGTTCAATGGTGGCGTCTACTTCC 1426
                      * ******  *** *********** ** ** *********** ** ** ******* **

consensus_3131#0      ACTCCAACGCTGCCCACAACCTTCTCTCCACCATGCGCGTCGGTGTCATCCGTGGCGGCA 1499
consensus_3131#1      ACTCCAACGCCGGCCACAACTTGCTCTCTACCATGAGAGTTGGTGTTATCCGTGGTGGAT 1486
                      ********** * ******* * ***** ****** * ** ***** ******** **  

consensus_3131#0      TGGAGGTCGAGATCTGGAAGCGCGCCCATGGCGAGAACAAGGACTTCA------TCAAGG 1553
consensus_3131#1      GTGAAGTCGAGATCTGGAAGCGCGCCCAACGGGAGAATAAGGATGTTGGTCTGGTCAAGG 1546
                        ** ***********************  * ***** *****  *        ******

consensus_3131#0      ATGCCGCAGGCAACCGCATCGTGCGTGCTGGCGCGCAGGTGACCAAGGTCGTCGAGCCTC 1613
consensus_3131#1      ACAACCAAGGCAACCCAATCATCAGGGCGGGCAACCAGATTACCAAGGTTGCACAACCCA 1606
                      *   *  ********  *** *  * ** ***   *** * ******** *   * **  

consensus_3131#0      CCGCGAGCGCCGGCACCGCATAGATGATGACGGTCAAGTCGAGCAGAAGAAACTGAGACG 1673
consensus_3131#1      TCGAGAGTGCTAGTGCAGCGTAGATGGGTATTCCCTTTTTAATTTTTATGAGC------- 1659
                       ** *** **  *  * ** ******   *    *   *  *     *  * *       

consensus_3131#0      AATGCATGCAAATGTTACATG-GCGCGTTTAGCGAGTGGCCTGGGTTCTCCGCCTACTTT 1732
consensus_3131#1      GATGCATG---GCGTTAGGGATGTTCTCTTCCTAGGCGGACAGAGTAATTTATCGATTTC 1716
                       *******     ****     *  *  **     * ** * * **  *    * * ** 

consensus_3131#0      TGGAGAGAGGCAGGCGTTGTTTCACATTTTTTATGGGGCTTTTACACCTACACATTCGCT 1792
consensus_3131#1      ---AGAGCGT------TCGTTTGACGAGCATCATGAGGATGCT-CAGTCACAATTAGACG 1766
                         **** *       * **** **     * *** ** *  * **   ***  *   * 

consensus_3131#0      GTACATAGATTTCCTACTCACGCCACCTACGGGGTGCGATGATAGAGCTTAGCTATGAGC 1852
consensus_3131#1      GCGTATG---TTCACAGCCTTGCT-CGAGCGAGAGGCTTTTGAAAAGTAGTCTTATGACC 1822
                      *   **    ***  *  *  **  *   ** *  **  *   * **      ***** *

consensus_3131#0      TTAGTTTGGTGGACTAGTTAGCTAATCAGGTCGAAATCATAATGTACT 1900
consensus_3131#1      CAATCAGAATGAAATTGACA---------------------------- 1842
                        *      ** * * *  *                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)