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Oryza sativa
cluster # 3141 cluster # 3141       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3141#0 length = 1445 sequences # 2  

consensusID : consensus_3141#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1445
fasta sequence
                              [GTCACTCTCTCCGCTCCAGTCTCCACTCTCCAACGGTCACATTCTCTCTTCTCCTCCCTTCCCCGAATTCCCAACTCGATCCACGTCGCTCTCGCTCGCCACAGACACGGGCGCGCGGCGATCGGAGAAGCCTCGGACATTCGAGATCTCCCGCTGACCCTGTGGGCGGGCGGTGGGGGGTAGCCAGCCATGGTGGAGGAGGGGGCGAGGCGGCGGGTGGTGGTGGAGGTCTGCAACGCGCGGAACCTCATGCCCAAGGACGGGCAGGGGACGGCGAGCGCCTACGCCGTCGTCGACTTCGACGGCCAGCGCCGCCGCACGGCCACCAGGCCGCGGGATCTCAACCCGCAGTGGGGGGAGCGCCTCGAGTTCCTCGTCCACGACCCCGACGCCATGCGCGCCGAGACGCTCGAGCTCAACCTCTACAACGACAAGAAGGCCATCGCCGCCACCGGGGGAGGCGGCCGCCGCGGGGGCACGTTCCTCGGCAAGGTCAAGGTGGCCGGCGCCTCCTTCTCCAAGGCCGGGGACGAGGTGCTCGTCTATTACCCGCTCGAGAAGCGGAGCGTTTTCTCGCAGATCAAGGGGGAGATCGGGCTCAAGATTTGGTTCGTCGATGAGCCGCCGCCGCCGCCGCCACCCGCCGCCCCTGCGGATGGAAAGGCCGATGCTGCCGCGGAGAAGAAGGAGGCTGCCGAGGGTGGCAAGGAGGAGAAGGAGAAGGCGCCAGCCGCTGCCGCTGCCTCTGCGGCCGAGGAGAAGAAACCGGAGGCGCCGGCCGAGGAGAAGAAAGCAGAGGAGGCCAAGAAAGAAGAGAAGAAATCAGCTGAGGCCGACAAGAAGGAAGAGAAGGATGACAAGAAGAAGTCGCCGGAGAAGGGGAAGAAGGACGGCGAGAAGCCCAAAGAGGAAGGCAAGGCTAAGGACGAGACCAAGAAGGAGGTTGCGCCGGTGCCGCCTTCGCCGTCGAAGGCGCCGCCACCCTCACCGTCGAAGATGGAGCTCGCGGCCGCCGGAGTCGCCGGGGACCTCGAGATTCGTCCCCAGAGCGCCGCCGAGCGGAGCATGGCGGCCTCTGCGGGCAACGCGTCGTACGATCTGGTGGACCGCGTGCCTTACCTGTTCGTCCGGCTTCTCAAGGCCAAGCACCACGGCGGCGGAGACAAGCAGCCGCTGTACGCTCAGCTGTCCATCGGCACGCACGCCGTGAAGACGCGCGCGGCGACGGCCGCTGGCGAGTGGGATCAGGTGTTCGCCTTCCACAAGGATAGCCTCACGGCCACCTCACTAGAGGTCACCGTCCATGAAGAAGCCAAGAAGCCGGCGGCGGAGGGAGAAGCCACTCCGCCGGACACCAACCTCGGGTACGTCTCGTTCGATCTTCACGAGGTCCCAAAGCGGTCGCCTCCGGACAGCGCGCTGGCGCCGCAGTGGTACACCCTCGA]

[+] EMBL AK110820             [GTCACTCTCTCCGCTCCAGTCTCCACTCTCCAACGGTCACATTCTCTCTTCTCCTCCCTTCCCCGAATTCCCAACTCGATCCACGTCGCTCTCGCTCGCCACAGACACGGGCGCGCGGCGATCGGAGAAGCCTCGGACATTCGAGATCTCCCGCTGACCCTGTGGGCGGGCGGTGGGGGGTAGCCAGCCATGGTGGAGGAGGGGGCGAGGCGGCGGGTGGTGGTGGAGGTCTGCAACGCGCGGAACCTCATGCCCAAGGACGGGCAGGGGACGGCGAGCGCCTACGCCGTCGTCGACTTCGACGGCCAGCGCCGCCGCACGGCCACCAGGCCGCGGGATCTCAACCCGCAGTGGGGGGAGCGCCTCGAGTTCCTCGTCCACGACCCCGACGCCATGCGCGCCGAGACGCTCGAGCTCAACCTCTACAACGACAAGAAGGCCATCGCCGCCACCGGGGGAGGCGGCCGCCGCGGGGGCACGTTCCTCGGCAAGGTCAAGGTGGCCGGCGCCTCCTTCTCCAAGGCCGGGGACGAGGTGCTCGTCTATTACCCGCTCGAGAAGCGGAGCGTTTTCTCGCAGATCAAGGGGGAGATCGGGCTCAAGATTTGGTTCGTCGATGAGCCGCCGCCGCCGCCGCCACCCGCCGCCCCTGCGGATGGAAAGGCCGATGCTGCCGCGGAGAAGAAGGAGGCTGCCGAGGGTGGCAAGGAGGAGAAGGAGAAGGCGCCAGCCGCTGCCGCTGCCTCTGCGGCCGAGGAGAAGAAACCGGAGGCGCCGGCCGAGGAGAAGAAAGCAGAGGAGGCCAAGAAAGAAGAGAAGAAATCAGCTGAGGCCGACAAGAAGGAAGAGAAGGATGACAAGAAGAAGTCGCCGGAGAAGGGGAAGAAGGACGGCGAGAAGCCCAAAGAGGAAGGCAAGGCTAAGGACGAGACCAAGAAGGAGGTTGCGCCGGTGCCGCCTTCGCCGTCGAAGGCGCCGCCACCCTCACCGTCGAAGATGGAGCTCGCGGCCGCCGGAGTCGCCGGGGACCTCGAGATTCGTCCCCAGAGCGCCGCCGAGCGGAGCATGGCGGCCTCTGCGGGCAACGCGTCGTACGATCTGGTGGACCGCGTGCCTTACCTGTTCGTCCGGCTTCTCAAGGCCAAGCACCACGGCGGCGGAGACAAGCAGCCGCTGTACGCTCAGCTGTCCATCGGCACGCACGCCGTGAAGACGCGCGCGGCGACGGCCGCTGGCGAGTGGGATCAGGTGTTCGCCTTCCACAAGGATAGCCTCACGGCCACCTCACTAGAGGTCACCGTCCATGAAGAAGCCAAGAAGCCGGCGGCGGAGGGAGAAGCCACTCCGCCGGACACCAACCTCGGGTACGTCTCGTTCGATCTTCACGAGGTCCCAAAGCGGTCGCCTCCGGACAGCGCGCTGGCGCCGCAGTGGTACACCCTCGA]
[+] EMBL AK107712             [GTCACTCTCTCCGCTCCAGTCTCCACTCTCCAACGGTCACATTCTCTCTTCTCCTCCCTTCCCCGAATTCCCAACTCGATCCACGTCGCTCTCGCTCGCCACAGACACGGGCGCGCGGCGATCGGAGAAGCCTCGGACATTCGAGATCTCCCGCTGACCCTGTGGGCGGGCGGTGGGGGGTAGCCAGCCATGGTGGAGGAGGGGGCGAGGCGGCGGGTGGTGGTGGAGGTCTGCAACGCGCGGAACCTCATGCCCAAGGACGGGCAGGGGACGGCGAGCGCCTACGCCGTCGTCGACTTCGACGGCCAGCGCCGCCGCACGGCCACCAGGCCGCGGGATCTCAACCCGCAGTGGGGGGAGCGCCTCGAGTTCCTCGTCCACGACCCCGACGCCATGTGCGCCGAGACGCTCGAGCTCAACCTCTACAACGACAAGAAGGCCATCGCCGCCACCGGGGGAGGCGGCCGCCGCGGGGGCACGTTCCTCGGCAAGGTCAAGGTGGCCGGCGCCTCCTTCTCCAAGGCCGGGGACGAGGTGCTCGTCTATTACCCGCTCGAGAAGCGGAGCGTTTTCTCGCAGATCAAGGGGGAGATCGGGCTCAAGATTTGGTTCGTCGATGAGCCGCCGCCGCCGCCGCCACCCGCCGCCCCTGCGGATGGAAAGGCCGATGCTGCCGCGGAGAAGAAGGAGGCTGCCGAGGGTGGCAAGGAGGAGAAGGAGAAGGCGCCAGCCGCTGCCGCTGCCTCTGCGGCCGAGGAGAAGAAACCGGAGGCGCCGGCCGAGGAGAAGAAAGCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]


>consensus_3141#0 GTCACTCTCTCCGCTCCAGTCTCCACTCTCCAACGGTCACATTCTCTCTTCTCCTCCCTT CCCCGAATTCCCAACTCGATCCACGTCGCTCTCGCTCGCCACAGACACGGGCGCGCGGCG ATCGGAGAAGCCTCGGACATTCGAGATCTCCCGCTGACCCTGTGGGCGGGCGGTGGGGGG TAGCCAGCCATGGTGGAGGAGGGGGCGAGGCGGCGGGTGGTGGTGGAGGTCTGCAACGCG CGGAACCTCATGCCCAAGGACGGGCAGGGGACGGCGAGCGCCTACGCCGTCGTCGACTTC GACGGCCAGCGCCGCCGCACGGCCACCAGGCCGCGGGATCTCAACCCGCAGTGGGGGGAG CGCCTCGAGTTCCTCGTCCACGACCCCGACGCCATGCGCGCCGAGACGCTCGAGCTCAAC CTCTACAACGACAAGAAGGCCATCGCCGCCACCGGGGGAGGCGGCCGCCGCGGGGGCACG TTCCTCGGCAAGGTCAAGGTGGCCGGCGCCTCCTTCTCCAAGGCCGGGGACGAGGTGCTC GTCTATTACCCGCTCGAGAAGCGGAGCGTTTTCTCGCAGATCAAGGGGGAGATCGGGCTC AAGATTTGGTTCGTCGATGAGCCGCCGCCGCCGCCGCCACCCGCCGCCCCTGCGGATGGA AAGGCCGATGCTGCCGCGGAGAAGAAGGAGGCTGCCGAGGGTGGCAAGGAGGAGAAGGAG AAGGCGCCAGCCGCTGCCGCTGCCTCTGCGGCCGAGGAGAAGAAACCGGAGGCGCCGGCC GAGGAGAAGAAAGCAGAGGAGGCCAAGAAAGAAGAGAAGAAATCAGCTGAGGCCGACAAG AAGGAAGAGAAGGATGACAAGAAGAAGTCGCCGGAGAAGGGGAAGAAGGACGGCGAGAAG CCCAAAGAGGAAGGCAAGGCTAAGGACGAGACCAAGAAGGAGGTTGCGCCGGTGCCGCCT TCGCCGTCGAAGGCGCCGCCACCCTCACCGTCGAAGATGGAGCTCGCGGCCGCCGGAGTC GCCGGGGACCTCGAGATTCGTCCCCAGAGCGCCGCCGAGCGGAGCATGGCGGCCTCTGCG GGCAACGCGTCGTACGATCTGGTGGACCGCGTGCCTTACCTGTTCGTCCGGCTTCTCAAG GCCAAGCACCACGGCGGCGGAGACAAGCAGCCGCTGTACGCTCAGCTGTCCATCGGCACG CACGCCGTGAAGACGCGCGCGGCGACGGCCGCTGGCGAGTGGGATCAGGTGTTCGCCTTC CACAAGGATAGCCTCACGGCCACCTCACTAGAGGTCACCGTCCATGAAGAAGCCAAGAAG CCGGCGGCGGAGGGAGAAGCCACTCCGCCGGACACCAACCTCGGGTACGTCTCGTTCGAT CTTCACGAGGTCCCAAAGCGGTCGCCTCCGGACAGCGCGCTGGCGCCGCAGTGGTACACC CTCGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)