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Oryza sativa
cluster # 3178 cluster # 3178       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3178#0 length = 2340 sequences # 1  
consensus_3178#1 length = 812 sequences # 1  

consensusID : consensus_3178#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2340
fasta sequence
                              [CGAGGCGGCGGAGGTTGCGGCGGGGATGGACGCGGAGGGGTTGCTGGCGTCGGCGGCGATCAACCTGGGCCTGGCGCTGGTGGCGCTCTCGCTCTTCTCCTTGCTCAAGAAGCAGCCCGGCAACGCGCCGGTGTACCTTGCGCGGCGGATGGCCGCCGGTGGCGGTGGGGGCGGGCTGCCGCTCGGCCACGGGCGGTTGACCCCGTCGTTCCGGTGGATCCGCGCCGCGCTCCGGCTCTCCGAGGACGACGTGCTGCGGCGCCACGGCCTCGACGCGCTCGTCGTCGTCCGCCTCTTCAAATTCGGGATCAAGTGCTTCGCTGTTTGCTCAATCGTTGGATTGTTCATCCTTGCACCAACAAATTATTCCTGTGAAGGTCTACAAGACACCAAAAGGTCAAATTCAATGGAACTTTTCACGGTATCCAATGTGGCAAGGGGTTCTAACAGGCTTTGGGTGCATTTTGCATGCCTCTGCTTCATATCATTCTATGTGGTGTATTTGCTTCATAAGGAGCACAAAGAAATGTCCAGCAGAAGAATTGCACATTTGAAGTATCACAGGAAACGGCCTGACCAATATACCATTTTAGTTCGAGGAATTCCACTATGCCCAGATCATGGAACTTATGGGTGTTATGCTGACCACTTCTTCTCAAAGCACTACCGAACATACCAATCGTATCACATAGTACACGACATTGGAAACATCAAGGCACTTCAGAAGTTGGCATCCTCCCTTGAGGACAAGATAAAGAGGAAAAGAGAAACCAGAAGATGTAACTTTTGGAAGTGGATCTGGTTTAAGTTGACATTAGAAGCGATAGATACTCGCAAACTGGAAGAAAAACTGAAGAACGTCCATCACTCTATCCGCCTCCTACAGTGTGAAAATATGCTTAAACGGAAGGAATTACCGGTTGCTTTTGTCTCATTCAAATCACAGCTGGATGCTGCCCAAGCTGCCGAAATGCAACAGCATGTCAATCCTCTGTCCTTGGTGACAACATATGCTCCTGAACCACCTGATGCACTATGGACAAATCTGGCTATTCCTTTCTGCCGTATTGCTATATACAAACTTGGTGTCTTCATTGCTGCGTTTCTGCTAATAGTGTTCTTCTCCATCCCTGTCACAGCTGTGCAAGGGATAGTACAATTTGAGAAAATTAAAATATGGTTTCCACCGGCTAGAGCTGTGGAACTTATACCAGGTTTGAATTCTGTCGTAACTGGGTATCTTCCAAGCATGATCTTGAATGGCTTTATCTACTTGATTCCCTTCGCGATGCTTGGCATGGCATCATTTGAGGGATGCATTGCAAAAAGTCAGAAGGAAATCAAGGCCTGCAACATGGTATTTTACTTCTTGTTAGGGAATGTTTTCTTTTTGAGCATTCTTTCTGGTTCTCTACTCCACCAGATAGGAGAATCCTTTACACATCCAAAAGACATACCTAGCCGTCTGGCCCGTGCTGTTTCTGCACAGTCAGATTTCTTCATCACATACATTTTGACCGACGGCATGTCAGGGTTTTCCTTGGAGGTTCTTCAGTTTGGTTTGCTTACATGGCATTTCTTCAAGGCACATTCAATTGGACATAGTGAGCAGCCATATCTTTATGGCTTCCCTTACTACAGAGTTGTGCCCATCGTTTCCCTTGCAGTATTGATTGGGTTGGTCTATGCTGTTGTTGCGCCTCTTCTACTTCCAATTCTTGTTATCTACTTTTTGCTTGGTTACGCAGTGTACATCAACAAGATGGAAGATGTATATGAGATTACATATGATACTTGTGGACAATATTGGCCCAATATTCATCGCTACATCTTCCTTTCGGTCACACTCATGCAAATTACAATGCTGAAGTCGAAACCGGGGGCTTCATTCGCCACGGTTCCCTTGCTTGTGTCAACCATTTTGTTCAATGAGTACTGCAAGGTTCGGTTTCTTCCAACCTTCCTTCATCGACCGGTTCAGGTTGCCAAGGAGAATGACGACCTTAATGAAGCTGAGGGGATGAGAGGTGACCTGGACCATGCCATTAGCGCCTATAAGCCACCATGGATGCGCCCGACGAACTTCTCTCCAGATTGTAGTTCGGTACAACCTTTGATCCGTTCTGTATAGTAGTGTTGGTGACACCGCTAGCTTGGTATTGGTTTTAGTCCTGTTACATAATAAGAACCAGGCAAATTTTCGTGTGAAGTTTGGCTGTTGGCAGATATAAGCTCGCATATAACAATGGCATATGCTTTTTATGTGCTCAAGGAGTCGTTTTACATGTAATTACCACGCTTTGGCTCAGTTTACTCGGTGAAAATTACAAATTCAAACAA]

[+] EMBL AK101121             [CGAGGCGGCGGAGGTTGCGGCGGGGATGGACGCGGAGGGGTTGCTGGCGTCGGCGGCGATCAACCTGGGCCTGGCGCTGGTGGCGCTCTCGCTCTTCTCCTTGCTCAAGAAGCAGCCCGGCAACGCGCCGGTGTACCTTGCGCGGCGGATGGCCGCCGGTGGCGGTGGGGGCGGGCTGCCGCTCGGCCACGGGCGGTTGACCCCGTCGTTCCGGTGGATCCGCGCCGCGCTCCGGCTCTCCGAGGACGACGTGCTGCGGCGCCACGGCCTCGACGCGCTCGTCGTCGTCCGCCTCTTCAAATTCGGGATCAAGTGCTTCGCTGTTTGCTCAATCGTTGGATTGTTCATCCTTGCACCAACAAATTATTCCTGTGAAGGTCTACAAGACACCAAAAGGTCAAATTCAATGGAACTTTTCACGGTATCCAATGTGGCAAGGGGTTCTAACAGGCTTTGGGTGCATTTTGCATGCCTCTGCTTCATATCATTCTATGTGGTGTATTTGCTTCATAAGGAGCACAAAGAAATGTCCAGCAGAAGAATTGCACATTTGAAGTATCACAGGAAACGGCCTGACCAATATACCATTTTAGTTCGAGGAATTCCACTATGCCCAGATCATGGAACTTATGGGTGTTATGCTGACCACTTCTTCTCAAAGCACTACCGAACATACCAATCGTATCACATAGTACACGACATTGGAAACATCAAGGCACTTCAGAAGTTGGCATCCTCCCTTGAGGACAAGATAAAGAGGAAAAGAGAAACCAGAAGATGTAACTTTTGGAAGTGGATCTGGTTTAAGTTGACATTAGAAGCGATAGATACTCGCAAACTGGAAGAAAAACTGAAGAACGTCCATCACTCTATCCGCCTCCTACAGTGTGAAAATATGCTTAAACGGAAGGAATTACCGGTTGCTTTTGTCTCATTCAAATCACAGCTGGATGCTGCCCAAGCTGCCGAAATGCAACAGCATGTCAATCCTCTGTCCTTGGTGACAACATATGCTCCTGAACCACCTGATGCACTATGGACAAATCTGGCTATTCCTTTCTGCCGTATTGCTATATACAAACTTGGTGTCTTCATTGCTGCGTTTCTGCTAATAGTGTTCTTCTCCATCCCTGTCACAGCTGTGCAAGGGATAGTACAATTTGAGAAAATTAAAATATGGTTTCCACCGGCTAGAGCTGTGGAACTTATACCAGGTTTGAATTCTGTCGTAACTGGGTATCTTCCAAGCATGATCTTGAATGGCTTTATCTACTTGATTCCCTTCGCGATGCTTGGCATGGCATCATTTGAGGGATGCATTGCAAAAAGTCAGAAGGAAATCAAGGCCTGCAACATGGTATTTTACTTCTTGTTAGGGAATGTTTTCTTTTTGAGCATTCTTTCTGGTTCTCTACTCCACCAGATAGGAGAATCCTTTACACATCCAAAAGACATACCTAGCCGTCTGGCCCGTGCTGTTTCTGCACAGTCAGATTTCTTCATCACATACATTTTGACCGACGGCATGTCAGGGTTTTCCTTGGAGGTTCTTCAGTTTGGTTTGCTTACATGGCATTTCTTCAAGGCACATTCAATTGGACATAGTGAGCAGCCATATCTTTATGGCTTCCCTTACTACAGAGTTGTGCCCATCGTTTCCCTTGCAGTATTGATTGGGTTGGTCTATGCTGTTGTTGCGCCTCTTCTACTTCCAATTCTTGTTATCTACTTTTTGCTTGGTTACGCAGTGTACATCAACAAGATGGAAGATGTATATGAGATTACATATGATACTTGTGGACAATATTGGCCCAATATTCATCGCTACATCTTCCTTTCGGTCACACTCATGCAAATTACAATGCTGAAGTCGAAACCGGGGGCTTCATTCGCCACGGTTCCCTTGCTTGTGTCAACCATTTTGTTCAATGAGTACTGCAAGGTTCGGTTTCTTCCAACCTTCCTTCATCGACCGGTTCAGGTTGCCAAGGAGAATGACGACCTTAATGAAGCTGAGGGGATGAGAGGTGACCTGGACCATGCCATTAGCGCCTATAAGCCACCATGGATGCGCCCGACGAACTTCTCTCCAGATTGTAGTTCGGTACAACCTTTGATCCGTTCTGTATAGTAGTGTTGGTGACACCGCTAGCTTGGTATTGGTTTTAGTCCTGTTACATAATAAGAACCAGGCAAATTTTCGTGTGAAGTTTGGCTGTTGGCAGATATAAGCTCGCATATAACAATGGCATATGCTTTTTATGTGCTCAAGGAGTCGTTTTACATGTAATTACCACGCTTTGGCTCAGTTTACTCGGTGAAAATTACAAATTCAAACAA]


>consensus_3178#0 CGAGGCGGCGGAGGTTGCGGCGGGGATGGACGCGGAGGGGTTGCTGGCGTCGGCGGCGAT CAACCTGGGCCTGGCGCTGGTGGCGCTCTCGCTCTTCTCCTTGCTCAAGAAGCAGCCCGG CAACGCGCCGGTGTACCTTGCGCGGCGGATGGCCGCCGGTGGCGGTGGGGGCGGGCTGCC GCTCGGCCACGGGCGGTTGACCCCGTCGTTCCGGTGGATCCGCGCCGCGCTCCGGCTCTC CGAGGACGACGTGCTGCGGCGCCACGGCCTCGACGCGCTCGTCGTCGTCCGCCTCTTCAA ATTCGGGATCAAGTGCTTCGCTGTTTGCTCAATCGTTGGATTGTTCATCCTTGCACCAAC AAATTATTCCTGTGAAGGTCTACAAGACACCAAAAGGTCAAATTCAATGGAACTTTTCAC GGTATCCAATGTGGCAAGGGGTTCTAACAGGCTTTGGGTGCATTTTGCATGCCTCTGCTT CATATCATTCTATGTGGTGTATTTGCTTCATAAGGAGCACAAAGAAATGTCCAGCAGAAG AATTGCACATTTGAAGTATCACAGGAAACGGCCTGACCAATATACCATTTTAGTTCGAGG AATTCCACTATGCCCAGATCATGGAACTTATGGGTGTTATGCTGACCACTTCTTCTCAAA GCACTACCGAACATACCAATCGTATCACATAGTACACGACATTGGAAACATCAAGGCACT TCAGAAGTTGGCATCCTCCCTTGAGGACAAGATAAAGAGGAAAAGAGAAACCAGAAGATG TAACTTTTGGAAGTGGATCTGGTTTAAGTTGACATTAGAAGCGATAGATACTCGCAAACT GGAAGAAAAACTGAAGAACGTCCATCACTCTATCCGCCTCCTACAGTGTGAAAATATGCT TAAACGGAAGGAATTACCGGTTGCTTTTGTCTCATTCAAATCACAGCTGGATGCTGCCCA AGCTGCCGAAATGCAACAGCATGTCAATCCTCTGTCCTTGGTGACAACATATGCTCCTGA ACCACCTGATGCACTATGGACAAATCTGGCTATTCCTTTCTGCCGTATTGCTATATACAA ACTTGGTGTCTTCATTGCTGCGTTTCTGCTAATAGTGTTCTTCTCCATCCCTGTCACAGC TGTGCAAGGGATAGTACAATTTGAGAAAATTAAAATATGGTTTCCACCGGCTAGAGCTGT GGAACTTATACCAGGTTTGAATTCTGTCGTAACTGGGTATCTTCCAAGCATGATCTTGAA TGGCTTTATCTACTTGATTCCCTTCGCGATGCTTGGCATGGCATCATTTGAGGGATGCAT TGCAAAAAGTCAGAAGGAAATCAAGGCCTGCAACATGGTATTTTACTTCTTGTTAGGGAA TGTTTTCTTTTTGAGCATTCTTTCTGGTTCTCTACTCCACCAGATAGGAGAATCCTTTAC ACATCCAAAAGACATACCTAGCCGTCTGGCCCGTGCTGTTTCTGCACAGTCAGATTTCTT CATCACATACATTTTGACCGACGGCATGTCAGGGTTTTCCTTGGAGGTTCTTCAGTTTGG TTTGCTTACATGGCATTTCTTCAAGGCACATTCAATTGGACATAGTGAGCAGCCATATCT TTATGGCTTCCCTTACTACAGAGTTGTGCCCATCGTTTCCCTTGCAGTATTGATTGGGTT GGTCTATGCTGTTGTTGCGCCTCTTCTACTTCCAATTCTTGTTATCTACTTTTTGCTTGG TTACGCAGTGTACATCAACAAGATGGAAGATGTATATGAGATTACATATGATACTTGTGG ACAATATTGGCCCAATATTCATCGCTACATCTTCCTTTCGGTCACACTCATGCAAATTAC AATGCTGAAGTCGAAACCGGGGGCTTCATTCGCCACGGTTCCCTTGCTTGTGTCAACCAT TTTGTTCAATGAGTACTGCAAGGTTCGGTTTCTTCCAACCTTCCTTCATCGACCGGTTCA GGTTGCCAAGGAGAATGACGACCTTAATGAAGCTGAGGGGATGAGAGGTGACCTGGACCA TGCCATTAGCGCCTATAAGCCACCATGGATGCGCCCGACGAACTTCTCTCCAGATTGTAG TTCGGTACAACCTTTGATCCGTTCTGTATAGTAGTGTTGGTGACACCGCTAGCTTGGTAT TGGTTTTAGTCCTGTTACATAATAAGAACCAGGCAAATTTTCGTGTGAAGTTTGGCTGTT GGCAGATATAAGCTCGCATATAACAATGGCATATGCTTTTTATGTGCTCAAGGAGTCGTT TTACATGTAATTACCACGCTTTGGCTCAGTTTACTCGGTGAAAATTACAAATTCAAACAA



consensusID : consensus_3178#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 812
fasta sequence
                              [GACGAGACAAGGGGGGACATAGTGAGCAGCCATATCTTTATGGCTTCCCTTACTACAGAGTTGTGCCCATCGTTTCCCTTGCAGTATTGATTGGGTTGGTCTATGCTGTTGTTGCGCCTCTTCTACTTCCAATTCTTGTTATCTACTTTTTGCTTGGTTACGCAGTGTACATCAACCAGATGGAAGATGTATATGAGATTACATATGATACTTGTGGACAATATTGGCCCAATATTCATCGCTACATCTTCCTTTCGGTCACACTCATGCAAATTACAATGTTAGGGCTGTTTGGGCTGAAGTCGAAACCGGGGGCTTCATTCGCCACGGTTCCCTTGCTTGTGTCAACCATTTTGTTCAATGAGTACTGCAAGGTTCGGTTTCTTCCAACTTTCCTTCGTCGACCGGTTCAGGTTGCCAAGGAGAATGACGACCTTAATGAAGCTGAGGGGATGAGAGGTGACCTGGACCATGCCATTAGCGCCTATAAGCCACCATGGATGCGCCCGACGAACTTCTCTCCAGATTGTAGTTCGGTACAACCTTTGATCCGTTCTGTATAGTAGTGTTGGTGACACCGCTAGCTTGGTATTGGTTTTAGTTCTGTTACATAATAAGAACCAGGCAAATTTTTCGTGTGAAGTTTGGCTGTCGGCAGATATAAGCTCGCATATAACAATGGCATATGCTTTTTATGTGCTCAAGGAGTCGNTTTACATGTAATTACCACGCTTTGGCTCAGTTTACTCGGNGAAAATTACAAATTCAAACAATTTTTCTCTTATAAGTGATCAGGGGGATCTAACAAATGA]

[+] EMBL CA765805             [GACGAGACAAGGGGGGACATAGTGAGCAGCCATATCTTTATGGCTTCCCTTACTACAGAGTTGTGCCCATCGTTTCCCTTGCAGTATTGATTGGGTTGGTCTATGCTGTTGTTGCGCCTCTTCTACTTCCAATTCTTGTTATCTACTTTTTGCTTGGTTACGCAGTGTACATCAACCAGATGGAAGATGTATATGAGATTACATATGATACTTGTGGACAATATTGGCCCAATATTCATCGCTACATCTTCCTTTCGGTCACACTCATGCAAATTACAATGTTAGGGCTGTTTGGGCTGAAGTCGAAACCGGGGGCTTCATTCGCCACGGTTCCCTTGCTTGTGTCAACCATTTTGTTCAATGAGTACTGCAAGGTTCGGTTTCTTCCAACTTTCCTTCGTCGACCGGTTCAGGTTGCCAAGGAGAATGACGACCTTAATGAAGCTGAGGGGATGAGAGGTGACCTGGACCATGCCATTAGCGCCTATAAGCCACCATGGATGCGCCCGACGAACTTCTCTCCAGATTGTAGTTCGGTACAACCTTTGATCCGTTCTGTATAGTAGTGTTGGTGACACCGCTAGCTTGGTATTGGTTTTAGTTCTGTTACATAATAAGAACCAGGCAAATTTTTCGTGTGAAGTTTGGCTGTCGGCAGATATAAGCTCGCATATAACAATGGCATATGCTTTTTATGTGCTCAAGGAGTCGNTTTACATGTAATTACCACGCTTTGGCTCAGTTTACTCGGNGAAAATTACAAATTCAAACAATTTTTCTCTTATAAGTGATCAGGGGGATCTAACAAATGA]


>consensus_3178#1 GACGAGACAAGGGGGGACATAGTGAGCAGCCATATCTTTATGGCTTCCCTTACTACAGAG TTGTGCCCATCGTTTCCCTTGCAGTATTGATTGGGTTGGTCTATGCTGTTGTTGCGCCTC TTCTACTTCCAATTCTTGTTATCTACTTTTTGCTTGGTTACGCAGTGTACATCAACCAGA TGGAAGATGTATATGAGATTACATATGATACTTGTGGACAATATTGGCCCAATATTCATC GCTACATCTTCCTTTCGGTCACACTCATGCAAATTACAATGTTAGGGCTGTTTGGGCTGA AGTCGAAACCGGGGGCTTCATTCGCCACGGTTCCCTTGCTTGTGTCAACCATTTTGTTCA ATGAGTACTGCAAGGTTCGGTTTCTTCCAACTTTCCTTCGTCGACCGGTTCAGGTTGCCA AGGAGAATGACGACCTTAATGAAGCTGAGGGGATGAGAGGTGACCTGGACCATGCCATTA GCGCCTATAAGCCACCATGGATGCGCCCGACGAACTTCTCTCCAGATTGTAGTTCGGTAC AACCTTTGATCCGTTCTGTATAGTAGTGTTGGTGACACCGCTAGCTTGGTATTGGTTTTA GTTCTGTTACATAATAAGAACCAGGCAAATTTTTCGTGTGAAGTTTGGCTGTCGGCAGAT ATAAGCTCGCATATAACAATGGCATATGCTTTTTATGTGCTCAAGGAGTCGNTTTACATG TAATTACCACGCTTTGGCTCAGTTTACTCGGNGAAAATTACAAATTCAAACAATTTTTCT CTTATAAGTGATCAGGGGGATCTAACAAATGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3178#0      CGAGGCGGCGGAGGTTGCGGCGGGGATGGACGCGGAGGGGTTGCTGGCGTCGGCGGCGAT 60
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      CAACCTGGGCCTGGCGCTGGTGGCGCTCTCGCTCTTCTCCTTGCTCAAGAAGCAGCCCGG 120
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      CAACGCGCCGGTGTACCTTGCGCGGCGGATGGCCGCCGGTGGCGGTGGGGGCGGGCTGCC 180
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      GCTCGGCCACGGGCGGTTGACCCCGTCGTTCCGGTGGATCCGCGCCGCGCTCCGGCTCTC 240
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      CGAGGACGACGTGCTGCGGCGCCACGGCCTCGACGCGCTCGTCGTCGTCCGCCTCTTCAA 300
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      ATTCGGGATCAAGTGCTTCGCTGTTTGCTCAATCGTTGGATTGTTCATCCTTGCACCAAC 360
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      AAATTATTCCTGTGAAGGTCTACAAGACACCAAAAGGTCAAATTCAATGGAACTTTTCAC 420
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      GGTATCCAATGTGGCAAGGGGTTCTAACAGGCTTTGGGTGCATTTTGCATGCCTCTGCTT 480
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      CATATCATTCTATGTGGTGTATTTGCTTCATAAGGAGCACAAAGAAATGTCCAGCAGAAG 540
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      AATTGCACATTTGAAGTATCACAGGAAACGGCCTGACCAATATACCATTTTAGTTCGAGG 600
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      AATTCCACTATGCCCAGATCATGGAACTTATGGGTGTTATGCTGACCACTTCTTCTCAAA 660
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      GCACTACCGAACATACCAATCGTATCACATAGTACACGACATTGGAAACATCAAGGCACT 720
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      TCAGAAGTTGGCATCCTCCCTTGAGGACAAGATAAAGAGGAAAAGAGAAACCAGAAGATG 780
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      TAACTTTTGGAAGTGGATCTGGTTTAAGTTGACATTAGAAGCGATAGATACTCGCAAACT 840
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      GGAAGAAAAACTGAAGAACGTCCATCACTCTATCCGCCTCCTACAGTGTGAAAATATGCT 900
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      TAAACGGAAGGAATTACCGGTTGCTTTTGTCTCATTCAAATCACAGCTGGATGCTGCCCA 960
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      AGCTGCCGAAATGCAACAGCATGTCAATCCTCTGTCCTTGGTGACAACATATGCTCCTGA 1020
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      ACCACCTGATGCACTATGGACAAATCTGGCTATTCCTTTCTGCCGTATTGCTATATACAA 1080
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      ACTTGGTGTCTTCATTGCTGCGTTTCTGCTAATAGTGTTCTTCTCCATCCCTGTCACAGC 1140
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      TGTGCAAGGGATAGTACAATTTGAGAAAATTAAAATATGGTTTCCACCGGCTAGAGCTGT 1200
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      GGAACTTATACCAGGTTTGAATTCTGTCGTAACTGGGTATCTTCCAAGCATGATCTTGAA 1260
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      TGGCTTTATCTACTTGATTCCCTTCGCGATGCTTGGCATGGCATCATTTGAGGGATGCAT 1320
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      TGCAAAAAGTCAGAAGGAAATCAAGGCCTGCAACATGGTATTTTACTTCTTGTTAGGGAA 1380
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      TGTTTTCTTTTTGAGCATTCTTTCTGGTTCTCTACTCCACCAGATAGGAGAATCCTTTAC 1440
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      ACATCCAAAAGACATACCTAGCCGTCTGGCCCGTGCTGTTTCTGCACAGTCAGATTTCTT 1500
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      CATCACATACATTTTGACCGACGGCATGTCAGGGTTTTCCTTGGAGGTTCTTCAGTTTGG 1560
consensus_3178#1      ------------------------------------------------------------
                                                                                  

consensus_3178#0      TTTGCTTACATGGCATTTCTTCAAGGCACATTCAATTGGACATAGTGAGCAGCCATATCT 1620
consensus_3178#1      -----------------------GACGAGACAAGGGGGGACATAGTGAGCAGCCATATCT 37
                                                 * *       ***********************

consensus_3178#0      TTATGGCTTCCCTTACTACAGAGTTGTGCCCATCGTTTCCCTTGCAGTATTGATTGGGTT 1680
consensus_3178#1      TTATGGCTTCCCTTACTACAGAGTTGTGCCCATCGTTTCCCTTGCAGTATTGATTGGGTT 97
                      ************************************************************

consensus_3178#0      GGTCTATGCTGTTGTTGCGCCTCTTCTACTTCCAATTCTTGTTATCTACTTTTTGCTTGG 1740
consensus_3178#1      GGTCTATGCTGTTGTTGCGCCTCTTCTACTTCCAATTCTTGTTATCTACTTTTTGCTTGG 157
                      ************************************************************

consensus_3178#0      TTACGCAGTGTACATCAACAAGATGGAAGATGTATATGAGATTACATATGATACTTGTGG 1800
consensus_3178#1      TTACGCAGTGTACATCAACCAGATGGAAGATGTATATGAGATTACATATGATACTTGTGG 217
                      ******************* ****************************************

consensus_3178#0      ACAATATTGGCCCAATATTCATCGCTACATCTTCCTTTCGGTCACACTCATGCAAATTAC 1860
consensus_3178#1      ACAATATTGGCCCAATATTCATCGCTACATCTTCCTTTCGGTCACACTCATGCAAATTAC 277
                      ************************************************************

consensus_3178#0      AATG---------------CTGAAGTCGAAACCGGGGGCTTCATTCGCCACGGTTCCCTT 1905
consensus_3178#1      AATGTTAGGGCTGTTTGGGCTGAAGTCGAAACCGGGGGCTTCATTCGCCACGGTTCCCTT 337
                      ****               *****************************************

consensus_3178#0      GCTTGTGTCAACCATTTTGTTCAATGAGTACTGCAAGGTTCGGTTTCTTCCAACCTTCCT 1965
consensus_3178#1      GCTTGTGTCAACCATTTTGTTCAATGAGTACTGCAAGGTTCGGTTTCTTCCAACTTTCCT 397
                      ****************************************************** *****

consensus_3178#0      TCATCGACCGGTTCAGGTTGCCAAGGAGAATGACGACCTTAATGAAGCTGAGGGGATGAG 2025
consensus_3178#1      TCGTCGACCGGTTCAGGTTGCCAAGGAGAATGACGACCTTAATGAAGCTGAGGGGATGAG 457
                      ** *********************************************************

consensus_3178#0      AGGTGACCTGGACCATGCCATTAGCGCCTATAAGCCACCATGGATGCGCCCGACGAACTT 2085
consensus_3178#1      AGGTGACCTGGACCATGCCATTAGCGCCTATAAGCCACCATGGATGCGCCCGACGAACTT 517
                      ************************************************************

consensus_3178#0      CTCTCCAGATTGTAGTTCGGTACAACCTTTGATCCGTTCTGTATAGTAGTGTTGGTGACA 2145
consensus_3178#1      CTCTCCAGATTGTAGTTCGGTACAACCTTTGATCCGTTCTGTATAGTAGTGTTGGTGACA 577
                      ************************************************************

consensus_3178#0      CCGCTAGCTTGGTATTGGTTTTAGTCCTGTTACATAATAAGAACCAGGCAAATTTT-CGT 2204
consensus_3178#1      CCGCTAGCTTGGTATTGGTTTTAGTTCTGTTACATAATAAGAACCAGGCAAATTTTTCGT 637
                      ************************* ****************************** ***

consensus_3178#0      GTGAAGTTTGGCTGTTGGCAGATATAAGCTCGCATATAACAATGGCATATGCTTTTTATG 2264
consensus_3178#1      GTGAAGTTTGGCTGTCGGCAGATATAAGCTCGCATATAACAATGGCATATGCTTTTTATG 697
                      *************** ********************************************

consensus_3178#0      TGCTCAAGGAGTCGTTTTACATGTAATTACCACGCTTTGGCTCAGTTTACTCGGTGAAAA 2324
consensus_3178#1      TGCTCAAGGAGTCGNTTTACATGTAATTACCACGCTTTGGCTCAGTTTACTCGGNGAAAA 757
                      ************** *************************************** *****

consensus_3178#0      TTACAAATTCAAACAA--------------------------------------- 2340
consensus_3178#1      TTACAAATTCAAACAATTTTTCTCTTATAAGTGATCAGGGGGATCTAACAAATGA 812
                      ****************                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)