cluster # 3189

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Oryza sativa
cluster # 3189 cluster # 3189 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3189#0 length = 827 sequences # 2

consensusID : consensus_3189#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 827
fasta sequence

                              [TCATTTTCATTGATAAGATTG-ACTTACAGGTGCATCACAAATTCATATGTTACACATTCATATATAGCAAATATAAAGGGTCAATATTGTTCCTTTGCACCAAATGAAAGAGAACTTTACAGGTACCATCAAGGTAGGATAGTTTGCCTCTTAACGTGTATCTATCTGGTGAATGGTGCAAGTCCTTGTACATAGAGACCGTGACGATTTTTGAGGAATAATGAATGAATAATTTACAACAAAACTGTGGACCGAAGGGTGTGGCAGATCAGAACAATATAAATCAACGGTTAGTTGATTGTCAGCAGATAAACCAGAAAAAGGCTTCACATGGCAGATGACTCTGAATTGGTCTGAGTAAGAAGAGGTTTTACTTTTCTTGTGTGACCCAAACT-GTTCACAAGATCCCTCCGAGTGCATACAGTAAACATGTTGATTCCTGGCATGTTTAGGCGCCACAAGACGTACGGAAAACTGAGTTGGTCTCGAGATGTGAAGCGAACAACTTCATTGAACCAGGCACACATGAAGTGGTTCGTCACTGGGGCCAGCTCCCTCACAATGACTGAAGCTTCAGATAAAGCTTTTAACCCATGTAATCTTTTTTCATCTGGCATCCCATCTTTACGATACTGAGTTAATTGAACTTCTACTTCTTCTGGAGTAGCCTTGTGCTTTTGAACAATAGCTTTACCCTCATCATAGATGTTACTCCGTGCTCCATGTTCAGAAATAGCAAAGGTAGAATTTGTTCTCCAAAGAAGTGCTTCAAGCACACCTATTGGATCCCTTCGGAATTGGTATTTGGAGTCCACCCATATAGAGTA]

[+] EMBL CB632915             [TCATTTTCATTGATAAGATTG ACTTACAGGTGCATCACAAATTCATATGTTACACATTCATATATAGCAAATATAAAGGGTCAATATTGTTCCTTTGCACCAAATGAAAGAGAACTTTACAGGTACCATCAAGGTAGGATAGTTTGCCTCTTAACGTGTATCTATCTGGTGAATGGTGCAAGTCCTTGTACATAGAGACCGTGACGATTTTTGAGGAATAATGAATGAATAATTTACAACAAAACTGTGGACCGAAGGGTGTGGCAGATCAGAACAATATAAATCAACGGTTAGTTGATTGTCAGCAGATAAACCAGAAAAAGGCTTCACATGGCAGATGACTCTGAATTGGTCTGAGTAAGAAGAGGTTTTACTTTTCTTGTGTGACCCAAACT GTTCACAAGATCCCTCCGAGTGCATACAGTAAACATGTTGATTCCTGGCATGTTTAGGCGCCACAAGACGTACGGAAAACTGAGTTGGTCTCGAGATGTGAAGCGAACAACTTCATTGAACCAGGCACACATGAAGTGGTTCGTCACTGGGGCCAGCTCCCTCACAATGACTGAAGCTTCAGATAAAGCTTTTAACCCATGTAATCTTTTTTCATCTGGCATCCCATCTTTACGATACTGAGTTAATTGAACTTCTACTTCTTCTGGAGTAGCCTTGTGCTTTTGAACAATAGCTTTACCCTCATCATAGATGTTACTCCGTGCTCCATGTTCAGAAATAGCAAAGGTAGAATTTGTTCTCCAAAGAAGTGCTTCAAGCACACCTATTGGATCCCTTCGGAATTGGTATTTGGAGTCCACCCATATAGAGTA]
[-] EMBL AU166283             [      tttTTGATAAGATTGCAGCACCGGGTGCATCACAAATTCATATGTTACACATTCGTATATAGCAAATATAAAGGGTCAATATTGTTCCTTTGCACCAAATGAAAGAGAACTTTACAGGTACCATCAAGGTAGGATANTTTGCCTCTTAACGTGTATCTATCTGGTGAATGGTGCAAGTCCTTGTACATAGAGACCGTGACGATTTTTGAGGAATAATGAATGAATAATTTACAACAAAACTGTGGACCGAAGGGTGTGGCAGATCAGAACAATATAAATCAACGGTTAGTTGATTGTCAGCAGATAAACCAGAAAAAGGCTTCACATGGCAGATGACTCTGAATTGGTCTGAGTAAGAAGAGGTTTTACTTTTCTTGTGTGACCCAAACTGGTTCACAAGATCCCTCCGAGTGCATACAGTA                                                                                                                                                                                                                                                                                                                                                                                                                 ]




>consensus_3189#0
TCATTTTCATTGATAAGATTGACTTACAGGTGCATCACAAATTCATATGTTACACATTCA
TATATAGCAAATATAAAGGGTCAATATTGTTCCTTTGCACCAAATGAAAGAGAACTTTAC
AGGTACCATCAAGGTAGGATAGTTTGCCTCTTAACGTGTATCTATCTGGTGAATGGTGCA
AGTCCTTGTACATAGAGACCGTGACGATTTTTGAGGAATAATGAATGAATAATTTACAAC
AAAACTGTGGACCGAAGGGTGTGGCAGATCAGAACAATATAAATCAACGGTTAGTTGATT
GTCAGCAGATAAACCAGAAAAAGGCTTCACATGGCAGATGACTCTGAATTGGTCTGAGTA
AGAAGAGGTTTTACTTTTCTTGTGTGACCCAAACTGTTCACAAGATCCCTCCGAGTGCAT
ACAGTAAACATGTTGATTCCTGGCATGTTTAGGCGCCACAAGACGTACGGAAAACTGAGT
TGGTCTCGAGATGTGAAGCGAACAACTTCATTGAACCAGGCACACATGAAGTGGTTCGTC
ACTGGGGCCAGCTCCCTCACAATGACTGAAGCTTCAGATAAAGCTTTTAACCCATGTAAT
CTTTTTTCATCTGGCATCCCATCTTTACGATACTGAGTTAATTGAACTTCTACTTCTTCT
GGAGTAGCCTTGTGCTTTTGAACAATAGCTTTACCCTCATCATAGATGTTACTCCGTGCT
CCATGTTCAGAAATAGCAAAGGTAGAATTTGTTCTCCAAAGAAGTGCTTCAAGCACACCT
ATTGGATCCCTTCGGAATTGGTATTTGGAGTCCACCCATATAGAGTA

clustalw multiple alignements is not computed in this case