cluster # 3212

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Oryza sativa
cluster # 3212 cluster # 3212 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3212#0 length = 476 sequences # 2

consensusID : consensus_3212#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 476
fasta sequence

                              [CAGCAGCCGGAGGACTCCTCCTCATCCTCCTTGTTGCGCAACAAGCTAGCGCACAAGCTGCAGAGAAGGTAATTAGTGTGAGTGCTGTGGTGCAGCCAAATACCAAGAAGAAACCCCCTCATCAACAACCAAAAATAAGGAAATGCACTGAGGCCCAGAAGCAGGACATCCTGCACGAGTGCAGNGGGTATGTGACTGCGGGCTCCCACATCATCCTCCCAGATCTACATTCTGCATGTTGCGATGCTGCGCGGAGTGT-CAGAACCTCGACATGGATTGCATCGTCGATCTCCTCACCAGCGAAGAGAGGAGCAGGTACAACGGCAACAGGATCAAACATCTTAACGAGATGTGTCGTCCCTGAAGT-CCCGCTGTTAGCGATATGCTCTAGAGCTAATTATAGAGTTGATTGTATCACATACTATG-TTATTGA-TTATGAATAAAATGTTTTGTGAGAATCAAAAAAAAAAAAAAAA]

[+] EMBL OSC3501              [CAGCAGCCGGAGGACTCCTCCTCATCCTCCTTGTTGCGCAACAAGCTAGCGCACAAGCTGCAGAGAAGGTAATTAGTGTGAGTGCTGTGGTGCAGCCAAATACCAAGAAGAAACCCCCTCATCAACAACCAAAAATAAGGAAATGCACTGAGGCCCAGAAGCAGGACATCCTGCACGAGTGCAGNGGGTATGTGACTGCGGGCTCCCACATCATCCTCCCAGATCTACATTCTGCATGTTGCGATGCTGCGCGGAGTGT CAGAACCTCGACATGGATTGCATCGTCGATCTCCTCACCAGCGAAGAGAGGAGCAGGTACAACGGCAACAGGATCAAACATCTTAACGAGATGTGTCGTCCCTGAAGT CCCGCTGTTAGCGATATGCTCTAGAGCTAATTATAGAGTTGATTGTATCACATACTATG TTATTGA TTATGAA                                    ]
[+] EMBL AU085953             [ AGCAGCCGGAGGACTCCTCCTCATCCTCCTTGTTGCGCAACAAGCTAGCGCACAAGCTGCAGAGAAGGTAATTAGTGTGAGTGCTGTGGTGCAGCCAAATACCAAGAAGAAACCCCCTCATCAACAACCAAAAATAAGGAAATGCACTGAGGCCCAGAAGCAGGACATCCTGCACGAGTGCAGGGGGTATGTGACTGCGGGCTCCCACATCATCCTCCCAGATCTACATTCTGCATGTTGCGATGCTGCGCGGAGCGTGCAGAACCTCGACATGGATTGCATCGTCGATCTCCTCACCAGCGAAGAGAGGAGCAGGTACAACGCCAACAGGATCAAACATCTTAACGAGATGTGTCGTCCCTGAAGTCCCCGCTGTTAGCGATATGCTCTAGAGCTAATTATAGAGTTGATTGTATCACATACTATGTTTATTGATTTATGAATAAAATGTTTTGTGAGAATCAAAAAAAAAAAAAAAA]




>consensus_3212#0
CAGCAGCCGGAGGACTCCTCCTCATCCTCCTTGTTGCGCAACAAGCTAGCGCACAAGCTG
CAGAGAAGGTAATTAGTGTGAGTGCTGTGGTGCAGCCAAATACCAAGAAGAAACCCCCTC
ATCAACAACCAAAAATAAGGAAATGCACTGAGGCCCAGAAGCAGGACATCCTGCACGAGT
GCAGNGGGTATGTGACTGCGGGCTCCCACATCATCCTCCCAGATCTACATTCTGCATGTT
GCGATGCTGCGCGGAGTGTCAGAACCTCGACATGGATTGCATCGTCGATCTCCTCACCAG
CGAAGAGAGGAGCAGGTACAACGGCAACAGGATCAAACATCTTAACGAGATGTGTCGTCC
CTGAAGTCCCGCTGTTAGCGATATGCTCTAGAGCTAATTATAGAGTTGATTGTATCACAT
ACTATGTTATTGATTATGAATAAAATGTTTTGTGAGAATCAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case