cluster # 3260

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Oryza sativa
cluster # 3260 cluster # 3260 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3260#0 length = 696 sequences # 2

consensusID : consensus_3260#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 696
fasta sequence

                              [TATGGCGACATCGCTCATAGTCTACTCCATCCCACTCGTCGGAGCAACTCCATCCCCCGTCCAGCTCGCCGGCGTGTACTGGTTATTAGGAGAGCAGGTCTCAAAAAAGGTTTTTGGGAAGCGCTCCACGTGACTTCTTGTTGTTCGTCAACTACGGCTCCTCATTGCTCGAGTGATGCGTGCTGTCGTCAACACCCGGTACCGCGAGTGGTTCCTGTTGTGCAGCAGAACATCCAGAACCCTTGCTTCATCGATGACATCGACTGCATCCTCTATGATGGTAACGACCGCATCACCGATGATGACATCGATCATATCATCTACAACAACAATGTCTCCATCAACTCGGCATCANTATTTTTGATGACTGCTACACGNCATAGAAAGTCGTAG-NTGCAAGATAATTTAGGTATGGCCACCAATTTATTATAACGAAAAATATTTCGTAGCAATATATTATATTATCGCAATGATAATTTTTCTATGGCAAATAACTATATTTTGTTGCAACCATTTATAATCGTTGTTTTATTCAGTATTTTTGTTGCAATAGGAAATGAGCTATTGCCNCAAAAAAACATTACTATTGCAAAAAGCATGTTCTATCACCNCAATTTTAATTTATGTGGCTATTTGCATAGTACATGGTACTTTTGTTGCCNCGATAAATAAATTCGTTGCAATAAAAAAAAAAAA]

[+] EMBL OS1321819            [TATGGCGACATCGCTCATAGTCTACTCCATCCCACTCGTCGGAGCAACTCCATCCCCCGTCCAGCTCGCCGGCGTGTACTGGTTATTAGGAGAGCAGGTCTCAAAAAAGGTTTTTGGGAAGCGCTCCACGTGACTTCTTGTTGTTCGTCAACTACGGCTCCTCATTGCTCGAGTGATGCGTGCTGTCGTCAACACCCGGTACCGCGAGTGGTTCCTGTTGTGCAGCAGAACATCCAGAACCCTTGCTTCATCGATGACATCGACTGCATCCTCTATGATGGTAACGACCGCATCACCGATGATGACATCGATCATATCATCTACAACAACAATGTCTCCATCAACTCGGCATCANTATTTTTGATGACTGCTACACGNCATAGAAAGTCGTAG NTGCAAGATAATTTAGGTATGGCCACCAATTTATTA                                                                                                                                                                                                                                                                           ]
[+] EMBL AU167025             [                                                                                                                                                                                                                                                                          CATCCTCTATGATGGTAACGACCGCATCACCGATGATGACATCGATCATATCATCTACAACAACAATGTCTCCATCAACTCGGCATCACTA TTTTGATGACTGCTACACGACATAGAAAGTCGTAGACTGCAAGATAATTGAGCTATCGCCACCAATTTATTATAACGAAAAATATTTCGTAGCAATATATTATATTATCGCAATGATAATTTTTCTATGGCAAATAACTATATTTTGTTGCAACCATTTATAATCGTTGTTTTATTCAGTATTTTTGTTGCAATAGGAAATGAGCTATTGCCNCAAAAAAACATTACTATTGCAAAAAGCATGTTCTATCACCNCAATTTTAATTTATGTGGCTATTTGCATAGTACATGGTACTTTTGTTGCCNCGATAAATAAATTCGTTGCAATAAAAAAAAAAAA]




>consensus_3260#0
TATGGCGACATCGCTCATAGTCTACTCCATCCCACTCGTCGGAGCAACTCCATCCCCCGT
CCAGCTCGCCGGCGTGTACTGGTTATTAGGAGAGCAGGTCTCAAAAAAGGTTTTTGGGAA
GCGCTCCACGTGACTTCTTGTTGTTCGTCAACTACGGCTCCTCATTGCTCGAGTGATGCG
TGCTGTCGTCAACACCCGGTACCGCGAGTGGTTCCTGTTGTGCAGCAGAACATCCAGAAC
CCTTGCTTCATCGATGACATCGACTGCATCCTCTATGATGGTAACGACCGCATCACCGAT
GATGACATCGATCATATCATCTACAACAACAATGTCTCCATCAACTCGGCATCANTATTT
TTGATGACTGCTACACGNCATAGAAAGTCGTAGNTGCAAGATAATTTAGGTATGGCCACC
AATTTATTATAACGAAAAATATTTCGTAGCAATATATTATATTATCGCAATGATAATTTT
TCTATGGCAAATAACTATATTTTGTTGCAACCATTTATAATCGTTGTTTTATTCAGTATT
TTTGTTGCAATAGGAAATGAGCTATTGCCNCAAAAAAACATTACTATTGCAAAAAGCATG
TTCTATCACCNCAATTTTAATTTATGTGGCTATTTGCATAGTACATGGTACTTTTGTTGC
CNCGATAAATAAATTCGTTGCAATAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case