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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3276 cluster # 3276       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3276#0 length = 830 sequences # 2  

consensusID : consensus_3276#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 830
fasta sequence
                              [ACTAACTTTAGCATGCCATTGATATTTAATCTTTTCTTGAAAAACGAATACCAAGCTTACCTTTTCAGACAATAGAAAAGGAGTATCAGTCATTTCAACAAATCAAATGTGGC-GTTATATACAGATTTACTGCTGTTAGCAATTCAAAGAGGGAGTTGATAAATTAAACAGAGTAGCTTTCAGATCAGCAAACCGATGTGCTTCAGAAGTCCTGTCTGCAGCAGTGAGAAGCCGTATAATGCAGTCAAAATTATGTTCAGACGCTTCCAGATTGTATTCTTGCACCATGGAGTTGAAAATCTGAAGAGCTTCATCATGCAACCCTGCCGCTTCACAGATTCTCAGCAACACATCAAAGGTGCCATTATTTGGAACAAACCTGTTTGACAGCATCCAAGCAAAGAGTTCCAGTGCCTCCTTGTGTCTCTGGTTGATTGCGTAAGCTTCTATTATGGCAGTGCAAGTAAGGGATCCCTTGGACTCAATCCGGTTGAAAACCCGTTGCGCTGCCTTGAGGTCTCCACATGTGCCATACATGCTAACTAGCCCTGCTGCAACTAGGGGGAGAGGTTCCATCCGCAACTTTAACGCTTGACCATGCAATTCCTTGCCAAGTTTTGATGCCCCAATGTCACGGCAGGCACTCAACATCCTGCTGATTGCAACAGCATCAGGCCGGCGGTTTGAGAGCAGCATTGATCTGAACACATCAACAGCAGTTGAAGGATCACCATTCTTTAGGTACGCATCGACCAATGCTGTCCAAGCTTGTACAGTCTTCTTGTCCATGACATGGAACACCCGTTGAGAGTAATCCGAGTGACTGCACG]

[+] EMBL CB679417             [ACTAACTTTAGCATGCCATTGATATTTAATCTTTTCTTGAAAAACGAATACCAAGCTTACCTTTTCAGACAATAGAAAAGGAGTATCAGTCATTTCAACAAATCAAATGTGGC GTTATATACAGATTTACTGCTGTTAGCAATTCAAAGAGGGAGTTGATAAATTAAACAGAGTAGCTTTCAGATCAGCAAACCGATGTGCTTCAGAAGTCCTGTCTGCAGCAGTGAGAAGCCGTATAATGCAGTCAAAATTATGTTCAGACGCTTCCAGATTGTATTCTTGCACCATGGAGTTGAAAATCTGAAGAGCTTCATCATGCAACCCTGCCGCTTCACAGATTCTCAGCAACACATCAAAGGTGCCATTATTTGGAACAAACCTGTTTGACAGCATCCAAGCAAAGAGTTCCAGTGCCTCCTTGTGTCTCTGGTTGATTGCGTAAGCTTCTATTATGGCAGTGCAAGTAAGGGATCCCTTGGACTCAATCCGGTTGAAAACCCGTTGCGCTGCCTTGAGGTCTCCACATGTGCCATACATGCTAACTAGCCCTGCTGCAACTAGGGGGAGAGGTTCCATCCGCAACTTTAACGCTTGACCATGCAATTCCTTGCCAAGTTTTGATGCCCCAATGTCACGGCAGGCACTCAACATCCTGCTGATTGCAACAGCATCAGGCCGGCGGTTTGAGAGCAGCATTGATCTGAACACATCAACAGCAGTTGAAGGATCACCATTCTTTAGGTACGCATCGACCAATGCTGTCCAAGCTTGTACAGTCTTCTTGTCCATGACATGGAACACCCGTTGAGAGTAATCCGAGTGACTGCACG]
[-] EMBL AU172465             [                                                           ttTTTTCANACAATANAAAAGGAGTATCAGTCATTTCAACAAATCAAATGTGGCGGTTATATACAGATTTACTGCTGTTAGCAATTCAAAGAGGGAGTTGATAAATTAAACAGAGTAGCTTTCANATCAGCAAACCGATGTGCTTCANAAGTCCTGTCTGCAGCAGTGANAAGCCGTATAATGCAGTCAAAATTATGTTCANACGCTTCCANATTGTATTCTTGCACCATGGAGTTGAAAATCTGAAGAGCTTCATCATGCAACCCTGCCGNTTCACAGATTCTCAGCAACACATCAAAGGTGCCATTATTTGGAACAAACCTGTTTGACAGCATCCAAGCAAAGAGTTCCAGNGCCTCCTTGTGTCTCTGGTTGATTGCGTAAGCTTCTATTATGGCAGTGCAAGTAAGGGATCCCTTGGACTCAATCCG                                                                                                                                                                                                                                                                                                                                                     ]


>consensus_3276#0 ACTAACTTTAGCATGCCATTGATATTTAATCTTTTCTTGAAAAACGAATACCAAGCTTAC CTTTTCAGACAATAGAAAAGGAGTATCAGTCATTTCAACAAATCAAATGTGGCGTTATAT ACAGATTTACTGCTGTTAGCAATTCAAAGAGGGAGTTGATAAATTAAACAGAGTAGCTTT CAGATCAGCAAACCGATGTGCTTCAGAAGTCCTGTCTGCAGCAGTGAGAAGCCGTATAAT GCAGTCAAAATTATGTTCAGACGCTTCCAGATTGTATTCTTGCACCATGGAGTTGAAAAT CTGAAGAGCTTCATCATGCAACCCTGCCGCTTCACAGATTCTCAGCAACACATCAAAGGT GCCATTATTTGGAACAAACCTGTTTGACAGCATCCAAGCAAAGAGTTCCAGTGCCTCCTT GTGTCTCTGGTTGATTGCGTAAGCTTCTATTATGGCAGTGCAAGTAAGGGATCCCTTGGA CTCAATCCGGTTGAAAACCCGTTGCGCTGCCTTGAGGTCTCCACATGTGCCATACATGCT AACTAGCCCTGCTGCAACTAGGGGGAGAGGTTCCATCCGCAACTTTAACGCTTGACCATG CAATTCCTTGCCAAGTTTTGATGCCCCAATGTCACGGCAGGCACTCAACATCCTGCTGAT TGCAACAGCATCAGGCCGGCGGTTTGAGAGCAGCATTGATCTGAACACATCAACAGCAGT TGAAGGATCACCATTCTTTAGGTACGCATCGACCAATGCTGTCCAAGCTTGTACAGTCTT CTTGTCCATGACATGGAACACCCGTTGAGAGTAATCCGAGTGACTGCACG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)