cluster # 3301

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Oryza sativa
cluster # 3301 cluster # 3301 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3301#0 length = 969 sequences # 2

consensusID : consensus_3301#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 969
fasta sequence

                              [CGGCGACACTCAGACTCCCTCCACCGCAGCCGGCGAGGCGACCCCCACCCCACCCTCGCCGGGATTCACCGCCCGCTCCGCCACTCCGCAACCAAGCAATCAAGTCGCTCTCGCCTGGGGACGAATTGGGGTGGGGGATTTGGGGATGGAGGAGCAGTTCATCCTCCGGGTTCCCCCCTCCGTCGCGGAGCGGATCGAGCGCCTCATGAACGAATCCGCCGCCGCCTCCTCCTCTTCCAACCCCGAAGACGCGTCCCTCGACCTCTCCTTCTCAGAGGATGGAAGAAATGGCACATTTATGATTGGGAATGAAAGCTTTCCTGCATCACTCTTGGATCTCCCAACTGTTGTGGAGTCATACAAGACATATGATGATTCAGTGCTAATTAAAACAGCTGATATTGGTCAGATGATTATGGTAAGAGAAGAAGAAGATCCTGCTCCAGAAGGAGTTGAATACAAGCATGGTCTTACTCCTCCAATGAGGGACGCACGCAGGCGGCGTTTCCGCAGGGAGCCTGATTTGAATGCCGAACTTGTTCACCGAGTTGAGAAGGATCTCATTAGTATTATGCATGGGGTATCTATCAACCAGAATGCCAGTGCAATTCTAAGGGCAGGAGAAGGTGGCGATCGTAAGAAAGCGGGACCAGCTCCAGCAACCAAACCTAATGTCAAACAACCTGCTGCAAATGGCGAAGAAGCTGAGGCAGAGAGGAGTGACTCTGATGAGTCCGTTGACCCGTAGAATTCAAGTGGACAGGAATGATAAATAATCCTGCTCCTATGCCCGAGCACACCCAGTTGACTTAGCAGTTCATATCACA-GGGAAGGTTACTATGTACGGACTTGCTGTCACTGTTACGGCATGTTAATATTT-GTGTATGTAAAATTTGATGCGACGCTGGGACCCTTGGGGATGANGAGATATGGCTGCTNCTGGATGAAAATACACTGGTGCTTTACTGA]

[+] EMBL AK109444             [CGGCGACACTCAGACTCCCTCCACCGCAGCCGGCGAGGCGACCCCCACCCCACCCTCGCCGGGATTCACCGCCCGCTCCGCCACTCCGCAACCAAGCAATCAAGTCGCTCTCGCCTGGGGACGAATTGGGGTGGGGGATTTGGGGATGGAGGAGCAGTTCATCCTCCGGGTTCCCCCCTCCGTCGCGGAGCGGATCGAGCGCCTCATGAACGAATCCGCCGCCGCCTCCTCCTCTTCCAACCCCGAAGACGCGTCCCTCGACCTCTCCTTCTCAGAGGATGGAAGAAATGGCACATTTATGATTGGGAATGAAAGCTTTCCTGCATCACTCTTGGATCTCCCAACTGTTGTGGAGTCATACAAGACATATGATGATTCAGTGCTAATTAAAACAGCTGATATTGGTCAGATGATTATGGTAAGAGAAGAAGAAGATCCTGCTCCAGAAGGAGTTGAATACAAGCATGGTCTTACTCCTCCAATGAGGGACGCACGCAGGCGGCGTTTCCGCAGGGAGCCTGATTTGAATGCCGAACTTGTTCACCGAGTTGAGAAGGATCTCATTAGTATTATGCATGGGGTATCTATCAACCAGAATGCCAGTGCAATTCTAAGGGCAGGAGAAGGTGGCGATCGTAAGAAAGCGGGACCAGCTCCAGCAACCAAACCTAATGTCAAACAACCTGCTGCAAATGGCGAAGAAGCTGAGGCAGAGAGGAGTGACTCTGATGAGTCCGTTGACCCGTAGAATTCAAGTGGACAGGAATGATAAATAATCCTGCTCCTATGCCCGAGCACACCCAGTTGACTTAGCAGTTCATATCACA GGGAAGGTTACTATGTACGGACTTGCTGTCACTGTTACGGCATGTTAATATTT GTGTATGTAAA                                                                              ]
[+] EMBL CA766650             [                                                                                                                                                                                  TCCGTCGCGGAGCGGATCGAGCGCCTCATGAACGAATCCGCCGCCGCCTCCTCCTCTTCCAACCCCGAAGACGCGTCCCTCGATCTCTCCTTCTCAGAGGATGGAAGAAATGGCACATTTATGATTGGGAATGAAAGCTTTCCTGCATCACTCTTGGATCTCCCAACTGTTGTGGAGTCATACAAGACATATGATGATTCAGTGCTAATTAAAACAGCTGATATTGGTCAGATGATTATGGTAAGAGAAGAAGAAGATCCTGCTCCAGAAGGAGTTGAATACAAGCATGGTCTTACTCCTCCAATGAGGGACGCACGCAGGCGGCGTTTCCGCAGGGAGCCTGATTTGAATGCCGAACTTGTTCACCGAGTTGAGAAGGATCTCATTAGTATTATGCATGGGGTATCTATCAACCAGAATGCCAGTGCAATTCTAAGGGCAGGAGAAGGTGGCGATCGTAAGAAAGCGGGACCAGCTCCAGCAACCAAATCTAATGTCAAACAACCTGCTGCAAATGGCGAAGAAGCTGAGGCAGAGAGGAGTGACTCTGATGAGTCCGTTGACCCGTAGAATTCAAGTGGACAGGAATGATAAATAATCCTGCTCCTATGCCCGAGCACACCCAGTTGACTTAGTAGTTCATATCACAGGGGAANGNTACTATGTACGGACTTGCTGTCACTGNTACGGCATGGTAATATTTGGGGTATGTAAAATTTGATGCGACGCTGGGACCCTTGGGGATGANGAGATATGGCTGCTNCTGGATGAAAATACACTGGTGCTTTACTGA]




>consensus_3301#0
CGGCGACACTCAGACTCCCTCCACCGCAGCCGGCGAGGCGACCCCCACCCCACCCTCGCC
GGGATTCACCGCCCGCTCCGCCACTCCGCAACCAAGCAATCAAGTCGCTCTCGCCTGGGG
ACGAATTGGGGTGGGGGATTTGGGGATGGAGGAGCAGTTCATCCTCCGGGTTCCCCCCTC
CGTCGCGGAGCGGATCGAGCGCCTCATGAACGAATCCGCCGCCGCCTCCTCCTCTTCCAA
CCCCGAAGACGCGTCCCTCGACCTCTCCTTCTCAGAGGATGGAAGAAATGGCACATTTAT
GATTGGGAATGAAAGCTTTCCTGCATCACTCTTGGATCTCCCAACTGTTGTGGAGTCATA
CAAGACATATGATGATTCAGTGCTAATTAAAACAGCTGATATTGGTCAGATGATTATGGT
AAGAGAAGAAGAAGATCCTGCTCCAGAAGGAGTTGAATACAAGCATGGTCTTACTCCTCC
AATGAGGGACGCACGCAGGCGGCGTTTCCGCAGGGAGCCTGATTTGAATGCCGAACTTGT
TCACCGAGTTGAGAAGGATCTCATTAGTATTATGCATGGGGTATCTATCAACCAGAATGC
CAGTGCAATTCTAAGGGCAGGAGAAGGTGGCGATCGTAAGAAAGCGGGACCAGCTCCAGC
AACCAAACCTAATGTCAAACAACCTGCTGCAAATGGCGAAGAAGCTGAGGCAGAGAGGAG
TGACTCTGATGAGTCCGTTGACCCGTAGAATTCAAGTGGACAGGAATGATAAATAATCCT
GCTCCTATGCCCGAGCACACCCAGTTGACTTAGCAGTTCATATCACAGGGAAGGTTACTA
TGTACGGACTTGCTGTCACTGTTACGGCATGTTAATATTTGTGTATGTAAAATTTGATGC
GACGCTGGGACCCTTGGGGATGANGAGATATGGCTGCTNCTGGATGAAAATACACTGGTG
CTTTACTGA

clustalw multiple alignements is not computed in this case