cluster # 3333

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3333 cluster # 3333 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3333#0 length = 916 sequences # 2

consensusID : consensus_3333#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 916
fasta sequence

                              [TCTGCTCTCAGAATATCCAACCTAGCTAGCCTGCAAGCAAGAGAGTGTAGCTACTCGATCCGATCCAATGTCTCTCATCACGGATGAGTCTCCTAGGGATTGCTCCTCCTACAAGCATCAGCATCATCATCGCGCCATCCATGGTCGCCGAATTAGCCGCCGCACTCTGGTGGTGGCGTCCTCAGCGGTGGTGTCTCTGGCATCGCTGTCGCTCATCCTGTGGCTCGTCCTCCGCCCATCCCCCCCGCGCTTCTCGCTGCTCGCCGCCACCACCACCGCCAACGACTCTGCCTCTGTCGTCGCCATCAACGCCGCCTTCGCCGCCCGCAACCCCAACTCCCACACCGCCGTTCTCTACGACCGCCTCCAGGCTAGCGCCTCCTACGCCGGGCTCCCTCTCACCGCCCCCTCGCCGCTGATCCCGCCCTTCTTGCCGCAGCAGGGCCAGGGCGACGCCATGCTCTCCGCGTCGCTCACGTCGCCACCGGCAGCGGCTGCTGTGGCGGGAGGGCGGGCGCTGCTGAGGCTGCGCGTGGAGGGGCAGCTCCGCTGGAAGGTGGCGGCGTGGGTCACCGGACGCCACGCGCTCACCGTCGACTGCATCGCCGTTGTGGAGCTGCAGCCGACGCCGACGCCGTCGCCGAGCGCGATCGTCGGCGTCCTCCAGCCCCAAGATCAGGCCGGCTCCCGCTGCTCCACCACCGTCGCCTAATAATATAATATCCATCAAAACCAACACCACAAACCATGCAAACTGATCGATGGATGCATGGAGGAACAGTCCTAGTTCT------TGTACATGTACATGTATTCTCTCTCGCGTTATGTATGTATATTGTCCTGTACCGCGCGCGGTAAACAAGTAATAAATCAAAGCAATCTGAATCGTACAACGTATTTCATGTGTTGCTTTGATTTT]

[+] EMBL AK062483             [TCTGCTCTCAGAATATCCAACCTAGCTAGCCTGCAAGCAAGAGAGTGTAGCTACTCGATCCGATCCAATGTCTCTCATCACGGATGAGTCTCCTAGGGATTGCTCCTCCTACAAGCATCAGCATCATCATCGCGCCATCCATGGTCGCCGAATTAGCCGCCGCACTCTGGTGGTGGCGTCCTCAGCGGTGGTGTCTCTGGCATCGCTGTCGCTCATCCTGTGGCTCGTCCTCCGCCCATCCCCCCCGCGCTTCTCGCTGCTCGCCGCCACCACCACCGCCAACGACTCTGCCTCTGTCGTCGCCATCAACGCCGCCTTCGCCGCCCGCAACCCCAACTCCCACACCGCCGTTCTCTACGACCGCCTCCAGGCTAGCGCCTCCTACGCCGGGCTCCCTCTCACCGCCCCCTCGCCGCTGATCCCGCCCTTCTTGCCGCAGCAGGGCCAGGGCGACGCCATGCTCTCCGCGTCGCTCACGTCGCCACCGGCAGCGGCTGCTGTGGCGGGAGGGCGGGCGCTGCTGAGGCTGCGCGTGGAGGGGCAGCTCCGCTGGAAGGTGGCGGCGTGGGTCACCGGACGCCACGCGCTCACCGTCGACTGCATCGCCGTTGTGGAGCTGCAGCCGACGCCGACGCCGTCGCCGAGCGCGATCGTCGGCGTCCTCCAGCCCCAAGATCAGGCCGGCTCCCGCTGCTCCACCACCGTCGCCTAATAATATAATATCCATCAAAACCAACACCACAAACCATGCAAACTGATCGATGGATGCATGGAGGAACAGTCCTAGTTCT      TGTACATGTACATGTATTCTCTCTCGCGTTATGTATGTATATTGTCCTGTACCGCGCGCGGTAAACAAGTAATAAATCAAAGCAATCTGAATCGTACAACGTATTTCATGTGTTGCTTTGATTTT]
[+] EMBL BI801090             [                                                                                                                                                                                                                                                                                                                                                                                                                                                ttccCAGCAGGGCCA GGCGACGCCATGCTCTCCGCGTCGCTCACGTCGCCACCGTCAGCGGCTGCTGT GCGGGA GGCGGGC CTGCTGA GCTGCGCGTGGAGGGGCAGCTCCCCTGGAAGGT GCGGCGTGGGTCACCGGACGCCACGCGCTCACCGTCGACTGCATCGCCGTTGTGGAGCTGCAGCCGACGCCGACGCCGTCGCCGAGCGCGATCGTCGGCGTCCTCCAGCCCCAAGATCAGGCCGGCTCCCGCTGCTCCACCACCGTCGCCTAATAATATAATATCCATCAAAACCAACACCAC AACCATGCAAACTGATCGATGGATGCATGGAGGAACAGTCCTAGTTCTTGTACATGTACATGTACATGTATTCTCTCTCGCGTTATGTATGTATATTGTCCTGTACCGCGCGCGGTAAACAAGTAATAAATC AAGC ATCTGAATCGTAC ACGTAaaaaaaaaa             ]




>consensus_3333#0
TCTGCTCTCAGAATATCCAACCTAGCTAGCCTGCAAGCAAGAGAGTGTAGCTACTCGATC
CGATCCAATGTCTCTCATCACGGATGAGTCTCCTAGGGATTGCTCCTCCTACAAGCATCA
GCATCATCATCGCGCCATCCATGGTCGCCGAATTAGCCGCCGCACTCTGGTGGTGGCGTC
CTCAGCGGTGGTGTCTCTGGCATCGCTGTCGCTCATCCTGTGGCTCGTCCTCCGCCCATC
CCCCCCGCGCTTCTCGCTGCTCGCCGCCACCACCACCGCCAACGACTCTGCCTCTGTCGT
CGCCATCAACGCCGCCTTCGCCGCCCGCAACCCCAACTCCCACACCGCCGTTCTCTACGA
CCGCCTCCAGGCTAGCGCCTCCTACGCCGGGCTCCCTCTCACCGCCCCCTCGCCGCTGAT
CCCGCCCTTCTTGCCGCAGCAGGGCCAGGGCGACGCCATGCTCTCCGCGTCGCTCACGTC
GCCACCGGCAGCGGCTGCTGTGGCGGGAGGGCGGGCGCTGCTGAGGCTGCGCGTGGAGGG
GCAGCTCCGCTGGAAGGTGGCGGCGTGGGTCACCGGACGCCACGCGCTCACCGTCGACTG
CATCGCCGTTGTGGAGCTGCAGCCGACGCCGACGCCGTCGCCGAGCGCGATCGTCGGCGT
CCTCCAGCCCCAAGATCAGGCCGGCTCCCGCTGCTCCACCACCGTCGCCTAATAATATAA
TATCCATCAAAACCAACACCACAAACCATGCAAACTGATCGATGGATGCATGGAGGAACA
GTCCTAGTTCTTGTACATGTACATGTATTCTCTCTCGCGTTATGTATGTATATTGTCCTG
TACCGCGCGCGGTAAACAAGTAATAAATCAAAGCAATCTGAATCGTACAACGTATTTCAT
GTGTTGCTTTGATTTT

clustalw multiple alignements is not computed in this case