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Oryza sativa
cluster # 3342 cluster # 3342       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3342#0 length = 1136 sequences # 2  

consensusID : consensus_3342#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1136
fasta sequence
                              [GTGGCGCACGTCCGGCCGCCTGAACCTGCGCCGATCGAGATATGGAGAACCTCCAGCTCCAGGGAGATGATCACGACGACGAAGCGCTCCCTCACTTCCCCTACTTCGCGGTGCCGTCACCGCCGCCGCTCGCCGTCGCGCCGGCGGCATCGGCGACGACGTCGGATGGTCACCAGCACGGCCCACTCGAGGTGCTCGAGCAGCCGCCGTGTAGTAATAACCTGCATCCCGATGGCCTGGTCGATGGCCCTCAGCTAGCGGCGACGACGGCGGTGCCGATGATGCTGCCGGCGATGACGTCCTTGGACTGGCAGTCGCTCCTGCAGACGTGCCTGCAGGTACCGCCTCCGGTGCTGGAGCAGCAGCAACCGGCGGCGGCGGCGCAGGCGGATCAGTACAGCGGGGAGAACGATCACGGCGATCTGCAGGCGGCCGAGAGCAGCGGGGCAGGTAACAAGGAGAAGCAGGTGATGGCGAAGGGCGGGGCGGGGAGGCCGTCGGGGACGAAGAAGAAGGCGAGCCGGCCGCGGTTCGCGTTCCAGACGAGGAGCGACAACGACATCCTGGACGACGGCTACCGATGGAGGAAGTACGGGCAGAAGGCCGTCAAGAACAGCAAGCACCCCAGGAGCTACTACCGGTGCACGCACCACACGTGCAACGTGAAGAAGCAAGTGCAGCGGCTCGCCAAGGACACGAGCATCGTGGTGACTACGTACGAGGGCGTGCACAACCACCCCTGCGAGAAGCTCATGGAGGCCCTCACCCCCATCCTCAAGCAGCTCCAGTTCCTCTCCCAGTTCTAATTAACGACCCATATCGATCGGTCTCGGTCGGTCTCAAACTCTGAAATGATCGATCTTTCAAGTTACTACACAAACACAATAACACACATTCACGTGTACATATATACCTGCAACAAATTAAACTCTCTGTTTAGCTTGGGGGGAAGAAAAGGAGAACAATGTGGCCTACCTCCCCCGTCTCCCGTCAATACAGTACAATATACTGCTAGTTGATCATGTATGTCGTCATACTGTATATACGTACTCCCTGTACGTGTATCCTTGTATATTTTCATATGTACGCTAAGCTTACGCATATATTGTATATGTGACACAAATAATGCCCCCGGA]

[+] EMBL AY341845             [GTGGCGCACGTCCGGCCGCCTGAACCTGCGCCGATCGAGATATGGAGAACCTCCAGCTCCAGGGAGATGATCACGACGACGAAGCGCTCCCTCACTTCCCCTACTTCGCGGTGCCGTCACCGCCGCCGCTCGCCGTCGCGCCGGCGGCATCGGCGACGACGTCGGATGGTCACCAGCACGGCCCACTCGAGGTGCTCGAGCAGCCGCCGTGTAGTAATAACCTGCATCCCGATGGCCTGGTCGATGGCCCTCAGCTAGCGGCGACGACGGCGGTGCCGATGATGCTGCCGGCGATGACGTCCTTGGACTGGCAGTCGCTCCTGCAGACGTGCCTGCAGGTACCGCCTCCGGTGCTGGAGCAGCAGCAACCGGCGGCGGCGGCGCAGGCGGATCAGTACAGCGGGGAGAACGATCACGGCGATCTGCAGGCGGCCGAGAGCAGCGGGGCAGGTAACAAGGAGAAGCAGGTGATGGCGAAGGGCGGGGCGGGGAGGCCGTCGGGGACGAAGAAGAAGGCGAGCCGGCCGCGGTTCGCGTTCCAGACGAGGAGCGACAACGACATCCTGGACGACGGCTACCGATGGAGGAAGTACGGGCAGAAGGCCGTCAAGAACAGCAAGCACCCCAGGAGCTACTACCGGTGCACGCACCACACGTGCAACGTGAAGAAGCAAGTGCAGCGGCTCGCCAAGGACACGAGCATCGTGGTGACTACGTACGAGGGCGTGCACAACCACCCCTGCGAGAAGCTCATGGAGGCCCTCACCCCCATCCTCAAGCAGCTCCAGTTCCTCTCCCAGTTCTAATTAACGACCCATATCGATCGGTCTCGGTCGGTCTCAAACTCTGAAATGATCGATCTTTCAAGTTACTACACAAACACAATAACACACATTCACGTGTACATATATACCTGCAACAAATTAAACTCTCTGTTTAGCTTGGG                                                                                                                                                                                              ]
[+] EMBL AK108909             [                               CGATCGAGATATGGAGAACCTCCAGCTCCAGGGAGATGATCACGACGACGAAGCGCTCCCTCACTTCCCCTACTTCGCGGTGCCGTCACCGCCGCCGCTCGCCGTCGCGCCGGCGGCATCGGCGACGACGTCGGATGGTCACCAGCACGGCCCACTCGAGGTGCTCGAGCAGCCGCCGTGTAGTAATAACCTGCATCCCGATGGCCTGGTCGATGGCCCTCAGCTAGCGGCGACGACGGCGGTGCCGATGATGCTGCCGGCGATGACGTCCTTGGACTGGCAGTCGCTCCTGCAGACGTGCCTGCAGGTACCGCCTCCGGTGCTGGAGCAGCAGCAACCGGCGGCGGCGGCGCAGGCGGATCAGTACAGCGGGGAGAACGATCACGGCGATCTGCAGGCGGCCGAGAGCAGCGGGGCAGGTAACAAGGAGAAGCAGGTGATGGCGAAGGGCGGGGCGGGGAGGCCGTCGGGGACGAAGAAGAAGGCGAGCCGGCCGCGGTTCGCGTTCCAGACGAGGAGCGACAACGACATCCTGGACGACGGCTACCGATGGAGGAAGTACGGGCAGAAGGCCGTCAAGAACAGCAAGCACCCCAGGAGCTACTACCGGTGCACGCACCACACGTGCAACGTGAAGAAGCAAGTGCAGCGGCTCGCCAAGGACACGAGCATCGTGGTGACTACGTACGAGGGCGTGCACAACCACCCCTGCGAGAAGCTCATGGAGGCCCTCACCCCCATCCTCAAGCAGCTCCAGTTCCTCTCCCAGTTCTAATTAACGACCCATATCGATCGGTCTCGGTCGGTCTCAAACTCTGAAATGATCGATCTTTCAAGTTGCTACACAAACACAATAACACACATTCACGTGTACATATATACCTGCAACAAATTAAACTCTCTGTTTAGCTTGGGGGGAAGAAAAGGAGAACAATGTGGCCTACCTCCCCCGTCTCCCGTCAATACAGTACAATATACTGCTAGTTGATCATGTATGTCGTCATACTGTATATACGTACTCCCTGTACGTGTATCCTTGTATATTTTCATATGTACGCTAAGCTTACGCATATATTGTATATGTGACACAAATAATGCCCCCGGA]


>consensus_3342#0 GTGGCGCACGTCCGGCCGCCTGAACCTGCGCCGATCGAGATATGGAGAACCTCCAGCTCC AGGGAGATGATCACGACGACGAAGCGCTCCCTCACTTCCCCTACTTCGCGGTGCCGTCAC CGCCGCCGCTCGCCGTCGCGCCGGCGGCATCGGCGACGACGTCGGATGGTCACCAGCACG GCCCACTCGAGGTGCTCGAGCAGCCGCCGTGTAGTAATAACCTGCATCCCGATGGCCTGG TCGATGGCCCTCAGCTAGCGGCGACGACGGCGGTGCCGATGATGCTGCCGGCGATGACGT CCTTGGACTGGCAGTCGCTCCTGCAGACGTGCCTGCAGGTACCGCCTCCGGTGCTGGAGC AGCAGCAACCGGCGGCGGCGGCGCAGGCGGATCAGTACAGCGGGGAGAACGATCACGGCG ATCTGCAGGCGGCCGAGAGCAGCGGGGCAGGTAACAAGGAGAAGCAGGTGATGGCGAAGG GCGGGGCGGGGAGGCCGTCGGGGACGAAGAAGAAGGCGAGCCGGCCGCGGTTCGCGTTCC AGACGAGGAGCGACAACGACATCCTGGACGACGGCTACCGATGGAGGAAGTACGGGCAGA AGGCCGTCAAGAACAGCAAGCACCCCAGGAGCTACTACCGGTGCACGCACCACACGTGCA ACGTGAAGAAGCAAGTGCAGCGGCTCGCCAAGGACACGAGCATCGTGGTGACTACGTACG AGGGCGTGCACAACCACCCCTGCGAGAAGCTCATGGAGGCCCTCACCCCCATCCTCAAGC AGCTCCAGTTCCTCTCCCAGTTCTAATTAACGACCCATATCGATCGGTCTCGGTCGGTCT CAAACTCTGAAATGATCGATCTTTCAAGTTACTACACAAACACAATAACACACATTCACG TGTACATATATACCTGCAACAAATTAAACTCTCTGTTTAGCTTGGGGGGAAGAAAAGGAG AACAATGTGGCCTACCTCCCCCGTCTCCCGTCAATACAGTACAATATACTGCTAGTTGAT CATGTATGTCGTCATACTGTATATACGTACTCCCTGTACGTGTATCCTTGTATATTTTCA TATGTACGCTAAGCTTACGCATATATTGTATATGTGACACAAATAATGCCCCCGGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)