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Oryza sativa
cluster # 3363 cluster # 3363       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3363#0 length = 3157 sequences # 2  

consensusID : consensus_3363#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3157
fasta sequence
                              [TTCATCATAAGTGCCAGCTGTACCTACCTTGCCTGCCTATCTGCTTTCTGGCTCAACCAATCAAAACATTTGCTTGTTTTTTGGTGCACCTATGCCAGGCTGGTTCGTGGTGTGTGAGGCATCTCCTGTGGTCTGTTGAATCTATTGATGAATCTGAAGATGCCCAAGAGGAAGAACACTCCAGATTATTTCCTGAGATAATTGCACTGACCTTAAATATCTCTTCCAAGCACCTCCCTGTTGCATCTAAATGCATTGCCGAAGATACTGTGCATGCTGTTGGCGACTTTATTTTGGAGTTACTAACCCTGACTGAAAGCTCAATACTTGACAAGAAACTCGGAACTACAGGACATGTTGCTAAGGCTGCACCTGTTTTTCTAGATGAAACCATCAAACTGTGCAGAGTGTACTCCGAGGCTGCAAAATCAGACCAGTGCATAATGAGCATGCCTAAAGAAGAGACAACTGAGGAACACAAAGAGACAGATCTTACTAGCAACATTGCCCAGATTACAGCATGCACTATTCAGTCCTTGTGTAAAATAGGAACCCATGCAGCATCCAGTGGTGGAAGCCAGGTGATTTTACTGAATATATCATGGAAGGGCATAATTTCCTTACTGCAGCTTGGTAAAGGGATGGTAGAAGAAAAGGTGAATGTAAGAGAGATTATTTTAATTCCTATCTCAGTTGCCATTGAATCTCTGGGGGTTGCTACTGAGAGATGGTGTGTACCATTACAAGAAGTCCTTGGTACCGCTGAAGCTAGGAGGGCTTTCTTACCAATCAAATATTTCCTAACGAACGCCGTTAGGATTTGTTCTATATATCCATCTGAAACAATGGCAATATACAAGAGCATAATCCGGTGTGCACTGCTGATTTCACACTCAAGTATTCTGTTCTGCAGAAATCCCCAGTTGAAAGCAGCAAGTGAATTACTTTTTGAGTTATTGGAGCCTAGTTCCTTTCTTCTGTTAGACACACTTATGAAGTCAACAGAAGTAAGTCCAGAGTCTAAATGCCAGCTCGTGCAGTACTTTTTGGAAAAAGTACGAACCGGTAATCCAGAGTACACCGGAGAAGTTGATCATACAATGAATTTCGCTACATTGGGTTGCATTTTTTCTGTGGATTCTGATGTTGATAATATAAACAGGGCACTTTTACCTGCTGAATTTACTGTGTTCTTGCACTTCCTCAATGCTTCCCCATGGTTGAGGGAAGAGGTGGTCATTGAATTATGTAAGAAGCTACATCTGTTTCTTAATATTTTAACGTTGGAAGATGTCTACTCATATGTACTTGGCTGCCAAATTCCTGCACTAAGTAGTGATGATGATTCTCCTAAGGTTGTCTGGCAACCTGTATATACTTCTCTTATACAAGCCTTGAAGACTTTTATGATTGCTGCTTCTTCTTCAAGTGCTGCTTGGAGTGAGTTTGAAGTCTTCTTACTTGAGAACCTTTTCCATCCCCATTTCCTTTGCTTGGAAATTCTAACAGAGCTATGGTGTTTCTTCATGCATTATGCTGAAGCTGAAACTTCAACCTATTTAATCAATCAGCTATTTCTTCTGTTAAAGACTCTAGCGTCACCAGAGGAAGTTCTTGCACCTCTCAGTGCTCTGAGGAAGCTTGCTCGTGCATCATGTAACATCTTGAGCTATGCATCGTCTGCAACAATTGATCAAATTTATACCATGCTGAATGATAGCTCTTCCAAGTCATCGATCTTGTACTTAGCACTGTTGATGGAAGGATTTCCTTTTGATTCATTATCTCGTGGTGTAAAGGAACATGCTGTGAAGACACTGTTCACTTCTTTTGCTGGGTATCTACAGAATCAGAACTACTTCAAGAATCATGGAGAAATCAACTTGCCAACTTCTTCTAGTTCGGGCATAATAGGGTTTCCTGTACATGCTCTAGCCTCTGCTTTCCAGAGTTGGTAAGTCCCTTGTCTCTTACTATTATTCAGTCTGATGCTAAAATGCTGCTTTTATTTTTGGAACCAAAGAAACAATTCTTTTGTACACAATATTTTATGCAGCGAAATAAAGGACGTTACCATTGATGAAAAAAGTATTGCTACTATGTTCAAGATTGCCACCTCTCTCATTAATCTTTATAGAACTTCACCTGATAGCAGTAAGAACCTCCTTGTCAAGCACATCAGTTCCATATTGGTTATTATTACGCACATGAGGCATCTTTGTGCGTTCAGTGAGTTGGAGAAGTTAACTTTGGAGTTGCACACTCTGTTCATGTCCAGTTTTGATAATTCAAATACAGCAATCTCTCAGTGCAAACCATCAATGGCTTCATTTATGGCAATTCTTGGTCACTTGCACACTACTGAAGACGATGCAAACCCACTTTGTTCTGCAATGTGGGATCTGTTCCATTTCTTGCTGAGGGAGCGGCATTGGGCACTCATTCACCTTGCAATGGGTTCCTTTGGGTACTTTGCCGCTCGCACTTCTTTTGCACAGCTCTGGAAATTTGTTCCTGTAGATGCTGCCCTTTCCTACACATGCACAGGGGTGGACATAGATGAGGATGGGTTTATGTCAGAATTGAAAGCCTTCCTTCAGAAAGAGGTAGCCTTGCGAGATGACAAATGGTCTGAAGAGCAAATATGTTCACTAGTTTCAGAGGGGAGAATGCTGAAGAAACTGGTTGAATCATGCTTGGAAATTCCTCTAGTTCCAGAGCCTGAGAAAGTTTCAATTACTAATTATGTGAAAACAAAGAAAA-GGAAGATGCCAGAT-GGAATTTGTGAAGGAATGCCTGAGAATGTTTCAGTTACTAATGATGTGGAAACAAAGAAGAGGAAGATGCCAGATAG-AATTTGTGAAGGAATGATGCTTGTACAGAACGGTCTCAAGATCAT-GCGGA-GTGCTCTCAGTGAAACAGACTTGGC-GGAGCTG-AAGGACA-GGTTTGCTGTACACTT-GTCGCGCCTTGAGGACGCAGTTTCTCATCTTGCTAGTTTCTCTGATAAAATCTAAGATTCTCGTTGTTAATGTACATCCATCATGATTTCCAATTCAGTTTCTTCTTAGCGTTGAAGTGAAATACCGTTGTGATTGAGGCTGCTAATATGCTATGAATGACTGGAGCCCAACTTACAGTGAATGCACATGAAAGTAAC]

[+] EMBL AK065797             [TTCATCATAAGTGCCAGCTGTACCTACCTTGCCTGCCTATCTGCTTTCTGGCTCAACCAATCAAAACATTTGCTTGTTTTTTGGTGCACCTATGCCAGGCTGGTTCGTGGTGTGTGAGGCATCTCCTGTGGTCTGTTGAATCTATTGATGAATCTGAAGATGCCCAAGAGGAAGAACACTCCAGATTATTTCCTGAGATAATTGCACTGACCTTAAATATCTCTTCCAAGCACCTCCCTGTTGCATCTAAATGCATTGCCGAAGATACTGTGCATGCTGTTGGCGACTTTATTTTGGAGTTACTAACCCTGACTGAAAGCTCAATACTTGACAAGAAACTCGGAACTACAGGACATGTTGCTAAGGCTGCACCTGTTTTTCTAGATGAAACCATCAAACTGTGCAGAGTGTACTCCGAGGCTGCAAAATCAGACCAGTGCATAATGAGCATGCCTAAAGAAGAGACAACTGAGGAACACAAAGAGACAGATCTTACTAGCAACATTGCCCAGATTACAGCATGCACTATTCAGTCCTTGTGTAAAATAGGAACCCATGCAGCATCCAGTGGTGGAAGCCAGGTGATTTTACTGAATATATCATGGAAGGGCATAATTTCCTTACTGCAGCTTGGTAAAGGGATGGTAGAAGAAAAGGTGAATGTAAGAGAGATTATTTTAATTCCTATCTCAGTTGCCATTGAATCTCTGGGGGTTGCTACTGAGAGATGGTGTGTACCATTACAAGAAGTCCTTGGTACCGCTGAAGCTAGGAGGGCTTTCTTACCAATCAAATATTTCCTAACGAACGCCGTTAGGATTTGTTCTATATATCCATCTGAAACAATGGCAATATACAAGAGCATAATCCGGTGTGCACTGCTGATTTCACACTCAAGTATTCTGTTCTGCAGAAATCCCCAGTTGAAAGCAGCAAGTGAATTACTTTTTGAGTTATTGGAGCCTAGTTCCTTTCTTCTGTTAGACACACTTATGAAGTCAACAGAAGTAAGTCCAGAGTCTAAATGCCAGCTCGTGCAGTACTTTTTGGAAAAAGTACGAACCGGTAATCCAGAGTACACCGGAGAAGTTGATCATACAATGAATTTCGCTACATTGGGTTGCATTTTTTCTGTGGATTCTGATGTTGATAATATAAACAGGGCACTTTTACCTGCTGAATTTACTGTGTTCTTGCACTTCCTCAATGCTTCCCCATGGTTGAGGGAAGAGGTGGTCATTGAATTATGTAAGAAGCTACATCTGTTTCTTAATATTTTAACGTTGGAAGATGTCTACTCATATGTACTTGGCTGCCAAATTCCTGCACTAAGTAGTGATGATGATTCTCCTAAGGTTGTCTGGCAACCTGTATATACTTCTCTTATACAAGCCTTGAAGACTTTTATGATTGCTGCTTCTTCTTCAAGTGCTGCTTGGAGTGAGTTTGAAGTCTTCTTACTTGAGAACCTTTTCCATCCCCATTTCCTTTGCTTGGAAATTCTAACAGAGCTATGGTGTTTCTTCATGCATTATGCTGAAGCTGAAACTTCAACCTATTTAATCAATCAGCTATTTCTTCTGTTAAAGACTCTAGCGTCACCAGAGGAAGTTCTTGCACCTCTCAGTGCTCTGAGGAAGCTTGCTCGTGCATCATGTAACATCTTGAGCTATGCATCGTCTGCAACAATTGATCAAATTTATACCATGCTGAATGATAGCTCTTCCAAGTCATCGATCTTGTACTTAGCACTGTTGATGGAAGGATTTCCTTTTGATTCATTATCTCGTGGTGTAAAGGAACATGCTGTGAAGACACTGTTCACTTCTTTTGCTGGGTATCTACAGAATCAGAACTACTTCAAGAATCATGGAGAAATCAACTTGCCAACTTCTTCTAGTTCGGGCATAATAGGGTTTCCTGTACATGCTCTAGCCTCTGCTTTCCAGAGTTGGTAAGTCCCTTGTCTCTTACTATTATTCAGTCTGATGCTAAAATGCTGCTTTTATTTTTGGAACCAAAGAAACAATTCTTTTGTACACAATATTTTATGCAGCGAAATAAAGGACGTTACCATTGATGAAAAAAGTATTGCTACTATGTTCAAGATTGCCACCTCTCTCATTAATCTTTATAGAACTTCACCTGATAGCAGTAAGAACCTCCTTGTCAAGCACATCAGTTCCATATTGGTTATTATTACGCACATGAGGCATCTTTGTGCGTTCAGTGAGTTGGAGAAGTTAACTTTGGAGTTGCACACTCTGTTCATGTCCAGTTTTGATAATTCAAATACAGCAATCTCTCAGTGCAAACCATCAATGGCTTCATTTATGGCAATTCTTGGTCACTTGCACACTACTGAAGACGATGCAAACCCACTTTGTTCTGCAATGTGGGATCTGTTCCATTTCTTGCTGAGGGAGCGGCATTGGGCACTCATTCACCTTGCAATGGGTTCCTTTGGGTACTTTGCCGCTCGCACTTCTTTTGCACAGCTCTGGAAATTTGTTCCTGTAGATGCTGCCCTTTCCTACACATGCACAGGGGTGGACATAGATGAGGATGGGTTTATGTCAGAATTGAAAGCCTTCCTTCAGAAAGAGGTAGCCTTGCGAGATGACAAATGGTCTGAAGAGCAAATATGTTCACTAGTTTCAGAGGGGAGAATGCTGAAGAAACTGGTTGAATCATGCTTGGAAATTCCTCTAGTTCCAGAGCCTGAGAAAGTTTCAATTACTAATTATGTGAAAACAAAGAAAA GGAAGATGCCAGAT GGAATTTGTGAAGGAATGCCTGAGAATGTTTCAGTTACTAATGATGTGGAAACAAAGAAGAGGAAGATGCCAGATAG AATTTGTGAAGGAATGATGCTTGTACAGAACGGTCTCAAGATCAT GCGGA GTGCTCTCAGTGAAACAGACTTGGC GGAGCTG AAGGACA GGTTTGCTGTACACTT GTCGCGCCTTGAGGACGCAGTTTCTCATCTTGCTAGTTTCTCTGATAAAATCTAAGATTCTCGTTGTTAATGTACATCCATCATGATTTCCAATTCAGTTTCTTCTTAGCGTTGAAGTGAAATACCGTTGTGATTGAGGCTGCTAATATGCTATGAATGACTGGAGCCCAACTTACAGTGAATGCACATGAAAGTAAC]
[+] EMBL CA767069             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGTATTGCTACTATGTTCAAGATTGCCACCTCTCTCATTAATCTTTATAGAACTTCACCTGATAGCAGTAAGAACCTCCTTGTCAAGCACATCAGTTCCATATTGGTTATTATTACGCACATGAGGCATCTTTGTGCGTTCAGTGAGTTGGAGAAGTTAACTTTGGAGTTGCACACTCTGTTCATGTCCAGTTTTGATAATTCAAATACAGCAATCTCTCAGTGCAAACCATCAATGGCTTCATTTATGGCAATTCTTGGTCACTTGAACACTACTGAAGATGATGCAAACCCACTTTGTTCTGCAATGTGGGATCTGTTCCATTTCTTGCTGAGGGAGCGGCATTGGGCACTCATTCACCTTGCAATGGGTTCCTTTGGGTACTTTGCCGCTCGCACTTCTTTTGCACAGCTCTGGAAATTTGTTCCTGTAGATGCTGCCCTTTCCTACACATGCACAGGGGTGGACATAGATGAGGATGAGTTTATGTCAGAATTGAAAGCCTTCCTTCAGAAAGAGGTAGCCTTGCGAGATGACAAATGGTCTGAAGAGCAAATATGTTCACTAGTTTCAGAGGGGAGAATGCTGAAGAAACTGGTTGAATCATGCTTGGAAATTCCTCTAGTTNCAGAGCCTGAGAAAGGTTCAATTACTAATTATGTGAAAACAAAGAAAAGGGAAGATGCCAGATGGGAATTTGTGAANGAATGCCTGAGATGGTTTCAGNTACTAATGATGNGGAAACAAAGAAGAGGAAGATGNCAGATAGAAATTTGNGAAGGAATGATGCTTGNACAGAACGGTCTCAAGATCATGGCGGAGGGGCTCTCAGNGNAACANACTTGGCGGGAGCTGAAAGGACAGGGTTTGCTGTACACTTGGTCG                                                                                                                                                                                                  ]


>consensus_3363#0 TTCATCATAAGTGCCAGCTGTACCTACCTTGCCTGCCTATCTGCTTTCTGGCTCAACCAA TCAAAACATTTGCTTGTTTTTTGGTGCACCTATGCCAGGCTGGTTCGTGGTGTGTGAGGC ATCTCCTGTGGTCTGTTGAATCTATTGATGAATCTGAAGATGCCCAAGAGGAAGAACACT CCAGATTATTTCCTGAGATAATTGCACTGACCTTAAATATCTCTTCCAAGCACCTCCCTG TTGCATCTAAATGCATTGCCGAAGATACTGTGCATGCTGTTGGCGACTTTATTTTGGAGT TACTAACCCTGACTGAAAGCTCAATACTTGACAAGAAACTCGGAACTACAGGACATGTTG CTAAGGCTGCACCTGTTTTTCTAGATGAAACCATCAAACTGTGCAGAGTGTACTCCGAGG CTGCAAAATCAGACCAGTGCATAATGAGCATGCCTAAAGAAGAGACAACTGAGGAACACA AAGAGACAGATCTTACTAGCAACATTGCCCAGATTACAGCATGCACTATTCAGTCCTTGT GTAAAATAGGAACCCATGCAGCATCCAGTGGTGGAAGCCAGGTGATTTTACTGAATATAT CATGGAAGGGCATAATTTCCTTACTGCAGCTTGGTAAAGGGATGGTAGAAGAAAAGGTGA ATGTAAGAGAGATTATTTTAATTCCTATCTCAGTTGCCATTGAATCTCTGGGGGTTGCTA CTGAGAGATGGTGTGTACCATTACAAGAAGTCCTTGGTACCGCTGAAGCTAGGAGGGCTT TCTTACCAATCAAATATTTCCTAACGAACGCCGTTAGGATTTGTTCTATATATCCATCTG AAACAATGGCAATATACAAGAGCATAATCCGGTGTGCACTGCTGATTTCACACTCAAGTA TTCTGTTCTGCAGAAATCCCCAGTTGAAAGCAGCAAGTGAATTACTTTTTGAGTTATTGG AGCCTAGTTCCTTTCTTCTGTTAGACACACTTATGAAGTCAACAGAAGTAAGTCCAGAGT CTAAATGCCAGCTCGTGCAGTACTTTTTGGAAAAAGTACGAACCGGTAATCCAGAGTACA CCGGAGAAGTTGATCATACAATGAATTTCGCTACATTGGGTTGCATTTTTTCTGTGGATT CTGATGTTGATAATATAAACAGGGCACTTTTACCTGCTGAATTTACTGTGTTCTTGCACT TCCTCAATGCTTCCCCATGGTTGAGGGAAGAGGTGGTCATTGAATTATGTAAGAAGCTAC ATCTGTTTCTTAATATTTTAACGTTGGAAGATGTCTACTCATATGTACTTGGCTGCCAAA TTCCTGCACTAAGTAGTGATGATGATTCTCCTAAGGTTGTCTGGCAACCTGTATATACTT CTCTTATACAAGCCTTGAAGACTTTTATGATTGCTGCTTCTTCTTCAAGTGCTGCTTGGA GTGAGTTTGAAGTCTTCTTACTTGAGAACCTTTTCCATCCCCATTTCCTTTGCTTGGAAA TTCTAACAGAGCTATGGTGTTTCTTCATGCATTATGCTGAAGCTGAAACTTCAACCTATT TAATCAATCAGCTATTTCTTCTGTTAAAGACTCTAGCGTCACCAGAGGAAGTTCTTGCAC CTCTCAGTGCTCTGAGGAAGCTTGCTCGTGCATCATGTAACATCTTGAGCTATGCATCGT CTGCAACAATTGATCAAATTTATACCATGCTGAATGATAGCTCTTCCAAGTCATCGATCT TGTACTTAGCACTGTTGATGGAAGGATTTCCTTTTGATTCATTATCTCGTGGTGTAAAGG AACATGCTGTGAAGACACTGTTCACTTCTTTTGCTGGGTATCTACAGAATCAGAACTACT TCAAGAATCATGGAGAAATCAACTTGCCAACTTCTTCTAGTTCGGGCATAATAGGGTTTC CTGTACATGCTCTAGCCTCTGCTTTCCAGAGTTGGTAAGTCCCTTGTCTCTTACTATTAT TCAGTCTGATGCTAAAATGCTGCTTTTATTTTTGGAACCAAAGAAACAATTCTTTTGTAC ACAATATTTTATGCAGCGAAATAAAGGACGTTACCATTGATGAAAAAAGTATTGCTACTA TGTTCAAGATTGCCACCTCTCTCATTAATCTTTATAGAACTTCACCTGATAGCAGTAAGA ACCTCCTTGTCAAGCACATCAGTTCCATATTGGTTATTATTACGCACATGAGGCATCTTT GTGCGTTCAGTGAGTTGGAGAAGTTAACTTTGGAGTTGCACACTCTGTTCATGTCCAGTT TTGATAATTCAAATACAGCAATCTCTCAGTGCAAACCATCAATGGCTTCATTTATGGCAA TTCTTGGTCACTTGCACACTACTGAAGACGATGCAAACCCACTTTGTTCTGCAATGTGGG ATCTGTTCCATTTCTTGCTGAGGGAGCGGCATTGGGCACTCATTCACCTTGCAATGGGTT CCTTTGGGTACTTTGCCGCTCGCACTTCTTTTGCACAGCTCTGGAAATTTGTTCCTGTAG ATGCTGCCCTTTCCTACACATGCACAGGGGTGGACATAGATGAGGATGGGTTTATGTCAG AATTGAAAGCCTTCCTTCAGAAAGAGGTAGCCTTGCGAGATGACAAATGGTCTGAAGAGC AAATATGTTCACTAGTTTCAGAGGGGAGAATGCTGAAGAAACTGGTTGAATCATGCTTGG AAATTCCTCTAGTTCCAGAGCCTGAGAAAGTTTCAATTACTAATTATGTGAAAACAAAGA AAAGGAAGATGCCAGATGGAATTTGTGAAGGAATGCCTGAGAATGTTTCAGTTACTAATG ATGTGGAAACAAAGAAGAGGAAGATGCCAGATAGAATTTGTGAAGGAATGATGCTTGTAC AGAACGGTCTCAAGATCATGCGGAGTGCTCTCAGTGAAACAGACTTGGCGGAGCTGAAGG ACAGGTTTGCTGTACACTTGTCGCGCCTTGAGGACGCAGTTTCTCATCTTGCTAGTTTCT CTGATAAAATCTAAGATTCTCGTTGTTAATGTACATCCATCATGATTTCCAATTCAGTTT CTTCTTAGCGTTGAAGTGAAATACCGTTGTGATTGAGGCTGCTAATATGCTATGAATGAC TGGAGCCCAACTTACAGTGAATGCACATGAAAGTAAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)