cluster # 3417

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Oryza sativa
cluster # 3417 cluster # 3417 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3417#0 length = 959 sequences # 2

consensusID : consensus_3417#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 959
fasta sequence

                              [GTAGGATGTTCTCCTTCAGAAGACTTAAATGAGGACAATTCTGCCCAGTTAGCTGATGGTGATGATTTAGTGGGAAGTAAAGATACTACTGCTGCACACGCCGGTGGCTTAAAGGAGCTTACCTCTGGCAATTATGTTGCCTCATCTTCTAGCCTTGTTGTTCAAGATTTAACATCCTTCTCGAAAATGGAGTCTCTGCAGGCTGGTAGTGAGGAAATCCATCATGGCTACCCTGATGAAACCATCCATTCTGCTAGAATCAAACCAGTGGTTGGTACTGAAATTACGGAAAATGCTTCTGTTGCTTCTGCACCAGTTATTACCATCCAACCAAATATTGAAACTGAAGCTGGAGTTACTGCGTCTTTGACTGTTTTGGAAGGGTCTATAGCAGAGGAAGTTGATGCACAAGTAGAAAGTGGCCATGATCTGGTCGCTAGTACAGCCCCTCTTTCACCAGCTCCTTTACCTGGTGAGAGTGATGCATGCACTGATGTATCATGTCCTGTGGCTGAGGAGGTATCAGAGACAAAGCTAGAGTCAGCAAACCACACAGCTAGCCAGTTAGGTGCAGCTTATACAGAAGCTTGTACAGAAACACCAAATGCCTTGTTGAACACTCTGATCCCTGCGTTACCTGAATCGGAGGAAACAAAACTTTCTGGAAGTGATACAGATGGAAAGACCATTATTGCAGAGCTAGCATCTTCCAGTGATGAACATGATAAGGTGCATGAAGTANGCAATGAAACTGGTGATGATAATAAACTTCCATCTAGTGTGGCAGAAGATGCAGTGCAGGATGAAATTAGTGGCAGTGCTGACATGGACAGTCAAATAATTGCTGGTAGTTCCGAAGCAGAAATCAACAATTCTACTGTGGCTACTATAGCTGACAGCCAAATACCTTTTGATCCCTCAGATAAGGACACTCTTGCAGAAGATGGCAATGGTCTGCA]

[+] EMBL CB627020             [GTAGGATGTTCTCCTTCAGAAGACTTAAATGAGGACAATTCTGCCCAGTTAGCTGATGGTGATGATTTAGTGGGAAGTAAAGATACTACTGCTGCACACGCCGGTGGCTTAAAGGAGCTTACCTCTGGCAATTATGTTGCCTCATCTTCTAGCCTTGTTGTTCAAGATTTAACATCCTTCTCGAAAATGGAGTCTCTGCAGGCTGGTAGTGAGGAAATCCATCATGGCTACCCTGATGAAACCATCCATTCTGCTAGAATCAAACCAGTGGTTGGTACTGAAATTACGGAAAATGCTTCTGTTGCTTCTGCACCAGTTATTACCATCCAACCAAATATTGAAACTGAAGCTGGAGTTACTGCGTCTTTGACTGTTTTGGAAGGGTCTATAGCAGAGGAAGTTGATGCACAAGTAGAAAGTGGCCATGATCTGGTCGCTAGTACAGCCCCTCTTTCACCAGCTCCTTTACCTGGTGAGAGTGATGCATGCACTGATGTATCATGTCCTGTGGCTGAGGAGGTATCAGAGACAAAGCTAGAGTCAGCAAACCACACAGCTAGCCAGTTAGGTGCAGCTTATACAGAAGCTTGTACAGAAACACCAAATGCCTTGTTGAACACTCTGATCCCTGCGTTACCTGAATCGGAGGAAACAAAACTTTCTGGAAGTGATACAGATGGAAAGACCATTATTGCAGAGCTAGCATCTTCCAGTGATGAACATGATAAGGTGCATGAAGTANGCAATGAAACTGGTGATGATAATAAACTTCCATCTAGTGTGGCAGAAGATGCAGTGCAGGATGAAATTAGTGGCAGTGCTGACATGGACAGTCAA                                                                                                                          ]
[+] EMBL CA882862             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCAAATGCCTTGTTGAACACTCTGATCCCTGCGTTACCTGAATCGGAGGAAACAAAACTTTCTGGAAGTGATACAGATGGAAAGACCATTATGGCAGAGCTTGCATCTTCCAGTGATGAACATGATAAGGTGCATGAAGTAGGTAATGAAACTGGTGATGATAATAAACTTCCATCTAGTGTGGCAGAAGATGCAGTGCAAGGTGAAATTGATGGCAGTGCTGACATGGACAGTCAAATAATTGCTGGTAGTTCCGAAGCAGAAATCAACAATTCTACTGTGGCTACTATAGCTGACAGCCAAATACCTTTTGATCCCTCAGATAAGGACACTCTTGCAGAAGATGGCAATGGTCTGCA]




>consensus_3417#0
GTAGGATGTTCTCCTTCAGAAGACTTAAATGAGGACAATTCTGCCCAGTTAGCTGATGGT
GATGATTTAGTGGGAAGTAAAGATACTACTGCTGCACACGCCGGTGGCTTAAAGGAGCTT
ACCTCTGGCAATTATGTTGCCTCATCTTCTAGCCTTGTTGTTCAAGATTTAACATCCTTC
TCGAAAATGGAGTCTCTGCAGGCTGGTAGTGAGGAAATCCATCATGGCTACCCTGATGAA
ACCATCCATTCTGCTAGAATCAAACCAGTGGTTGGTACTGAAATTACGGAAAATGCTTCT
GTTGCTTCTGCACCAGTTATTACCATCCAACCAAATATTGAAACTGAAGCTGGAGTTACT
GCGTCTTTGACTGTTTTGGAAGGGTCTATAGCAGAGGAAGTTGATGCACAAGTAGAAAGT
GGCCATGATCTGGTCGCTAGTACAGCCCCTCTTTCACCAGCTCCTTTACCTGGTGAGAGT
GATGCATGCACTGATGTATCATGTCCTGTGGCTGAGGAGGTATCAGAGACAAAGCTAGAG
TCAGCAAACCACACAGCTAGCCAGTTAGGTGCAGCTTATACAGAAGCTTGTACAGAAACA
CCAAATGCCTTGTTGAACACTCTGATCCCTGCGTTACCTGAATCGGAGGAAACAAAACTT
TCTGGAAGTGATACAGATGGAAAGACCATTATTGCAGAGCTAGCATCTTCCAGTGATGAA
CATGATAAGGTGCATGAAGTANGCAATGAAACTGGTGATGATAATAAACTTCCATCTAGT
GTGGCAGAAGATGCAGTGCAGGATGAAATTAGTGGCAGTGCTGACATGGACAGTCAAATA
ATTGCTGGTAGTTCCGAAGCAGAAATCAACAATTCTACTGTGGCTACTATAGCTGACAGC
CAAATACCTTTTGATCCCTCAGATAAGGACACTCTTGCAGAAGATGGCAATGGTCTGCA

clustalw multiple alignements is not computed in this case