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Oryza sativa
cluster # 352 cluster # 352       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_352#0 length = 1351 sequences # 2  

consensusID : consensus_352#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1351
fasta sequence
                              [GTCTGAATCAAAATATCAGATACAGCCAATCAGCCATGCGTACCAATCTGCACACAGTGAGCGGCGGCTACCCGATCTGGTACTGGTAGTAGCAGGAACGACGATGGCGGAGGAGTCAGGGAGGAGGAGCGGCGGCGGCGTCAGGGTGTGCGTCACCGGCGGCGCTGGGTTCATCGGCTCGTGGCTCGTCAAGAAGCTCCTCGGCGCCGGCTACACCGTGCACGCCACCCTGCGAAGCATAGGGGACGAGGTGAAGGTGGGCCTCCTGCGGCGGCTCGTCCCCGGCGACGCGCCGCCGGAGCGGCTGCGCCTGTTCGAGGCCGACCTCTACGACGCCGCCACCTTCGCTCCGGCCATCGCCGGCTGCCAGTTCGTCTTCCTCGTCGCCACGCCCTTCCTCCATGACGCCACCAGCACGAAGTACAATAACACGGCGGAGGCGGCGCTGGACGCGGCACGGGTGATCCTCCGGCAATGCGAGGAATCCAGCACGGTGAAGCGCGTCATCTACACGAGCTCCATGGCTGCGACCTCGCCGCTCAAGGAGGACTCCACCGGCTTCAAGGACTCCATCGACGAATCCTGCTGGACGCCGCTCGCCGTCGACTACCCTTACCGGAGCGCACGGTTCGATGAGTACATCCTGTCGAAGCTGCTGTCGGAGAAGGAGCTGCTGGGGCACAGCCACGCTGGCGAGAGGCGGAGGCCGGCGGTCGAGGTGGTGACGGTGCCGTGCTCCGTCGTCGCCGGCGGGACGCTGCAGGGGCAGTCGACGACGAGCCTGGACTGCGTCGTGTCGCCGGTGTCCCGGGACGAGGGCCGCTTCCGGGCGCTCAGGCTGCTGCAGAGGCTGATGGGGTCGGTGCCGATGGTGCACGTCGACGACGTCTGCGACGCGCTCGTCTTCTGCATGGAGCAGCCGTCCCTCACCGGCCGGTTCCTCTGCTCCGCCGCGTACCCGACTCTCGACGACATCGTCGAACACTTCGCCGGCAAGTACCCTCACCTCGACCTCCTCAAAGAAACGGAGACATTGCCGAGCATTCAAGCTCACACTGATAAGCTGGGGGAGCTGGGGTTCAAGTACAAGTACGGAATGGAGGAGATACTGGACGAGAGCGTGGAATGCGCGGTGAGACTTGGTTGCCTTGATGCGTCCAAGCTTAGTTTACAAGGATGATAATATCATCCTGATTAGTGCAATTTACCATCATTATTGTGTTGGTGTGCCTCTTCAGGCGTTCTAATTACTATACTTAAAATAAAAAGGAGCAATGGAGCATTCCTTGGCGTCATTGGTTTACAGTCGTGTACTCGTGTACTACCAGCAATCTGAAATCTGAACTTCATT]

[+] EMBL AK063834             [GTCTGAATCAAAATATCAGATACAGCCAATCAGCCATGCGTACCAATCTGCACACAGTGAGCGGCGGCTACCCGATCTGGTACTGGTAGTAGCAGGAACGACGATGGCGGAGGAGTCAGGGAGGAGGAGCGGCGGCGGCGTCAGGGTGTGCGTCACCGGCGGCGCTGGGTTCATCGGCTCGTGGCTCGTCAAGAAGCTCCTCGGCGCCGGCTACACCGTGCACGCCACCCTGCGAAGCATAGGGGACGAGGTGAAGGTGGGCCTCCTGCGGCGGCTCGTCCCCGGCGACGCGCCGCCGGAGCGGCTGCGCCTGTTCGAGGCCGACCTCTACGACGCCGCCACCTTCGCTCCGGCCATCGCCGGCTGCCAGTTCGTCTTCCTCGTCGCCACGCCCTTCCTCCATGACGCCACCAGCACGAAGTACAATAACACGGCGGAGGCGGCGCTGGACGCGGCACGGGTGATCCTCCGGCAATGCGAGGAATCCAGCACGGTGAAGCGCGTCATCTACACGAGCTCCATGGCTGCGACCTCGCCGCTCAAGGAGGACTCCACCGGCTTCAAGGACTCCATCGACGAATCCTGCTGGACGCCGCTCGCCGTCGACTACCCTTACCGGAGCGCACGGTTCGATGAGTACATCCTGTCGAAGCTGCTGTCGGAGAAGGAGCTGCTGGGGCACAGCCACGCTGGCGAGAGGCGGAGGCCGGCGGTCGAGGTGGTGACGGTGCCGTGCTCCGTCGTCGCCGGCGGGACGCTGCAGGGGCAGTCGACGACGAGCCTGGACTGCGTCGTGTCGCCGGTGTCCCGGGACGAGGGCCGCTTCCGGGCGCTCAGGCTGCTGCAGAGGCTGATGGGGTCGGTGCCGATGGTGCACGTCGACGACGTCTGCGACGCGCTCGTCTTCTGCATGGAGCAGCCGTCCCTCACCGGCCGGTTCCTCTGCTCCGCCGCGTACCCGACTCTCGACGACATCGTCGAACACTTCGCCGGCAAGTACCCTCACCTCGACCTCCTCAAAGAAACGGAGACATTGCCGAGCATTCAAGCTCACACTGATAAGCTGGGGGAGCTGGGGTTCAAGTACAAGTACGGAATGGAGGAGATACTGGACGAGAGCGTGGAATGCGCGGTGAGACTTGGTTGCCTTGATGCGTCCAAGCTTAGTTTACAAGGATGATAATATCATCCTGATTAGTGCAATTTACCATCATTATTGTGTTGGTGTGCCTCTTCAGGCGTTCTAATTACTATACTTAAAATAAAAAGGAGCAATGGAGCATTCCTTGGCGTCATTGGTTTACAGTCGTGTACTCGTGTACTACCAGCAATCTGAAATCTGAACTTCATT]
[+] EMBL AK099340             [                                                         TGAGCGGCGGCTACCCGATCTGGTACTGGTAGTAGCAGGAACGACGATGGCGGAGGAGTCAAGGAGGAGGAGCGGCGGCGGCGTCAGGGTGTGCGTCACCGGCGGCGCTGGGTTCATCGGCTCGTGGCTCGTCAAGAAGCTCCTCGGCGCCGGCTACACCGTGCACGCCACCCTGCGAAGCATAGGGGACGAGGTGAAGGTGGGCCTCCTGCGGCGGCTCGTCCCCGGCGACGCGCCGCCGGAGCGGCTGCGCCTGTTCGAGGCCGACCTCTACGACGCCGCCACCTTCGCTCCGGCCATCGCCGGCTGCCAGTTCGTCTTCCTCGTCGCCACGCCCTTCCTCCATGACGCCACCAGCACGAAGTACAATAACACGGCGGAGGCGGCGCTGGACGCGGCACGGGTGATCCTCCGGCAATGCGAGGAATCCAGCACGGTGAAGCGCGTCATCTACACGAGCTCCATGGCTGCGACCTCGCCGCTCAAGGAGGACTCCACCGGCTTCAAGGACTCCATCGACGAATCCTGCTGGACGCCGCTCGCCGTCGACTACCCTTACCGGAGCGCACGGTTCGATGAGTACATCCTGTCGAAGCTGCTGTCGGAGAAGGAGCTGCTGGGGCACAGCCACGCTGGCGAGAGGCGGAGGCCGGCGGTCGAGGTGGTGACGGTGCCGTGCTCCGTCGTCGCCGGCGGGACGCTGCAGGGGCAGTCGACGACGAGCCTGGACTGCGTCGTGTCGCCGGTGTCCCGGGACGAGGGCCGCTTCCGGGCGCTCAGGCTGCTGCAGAGGCTGATGGGGTCGGTGCCGATGGTGCACGTCGACGACGTCTGCGACGCGCTCGTCTTCTGCATGGAGCAGCCGTCCCTCACCGGCCGGTTCCTCTGCTCCGCCGCGTACCCGACTCTCGACGACATCGTCGAACACTTCGCCGGCAAGTACCCTCACCTCGACCTCCTCAAAGAAACGGAGACATTGCCGAGCATTCAAGCTCACACTGATAAGCTGGGGGAGCTGGGGTTCAAGTACAAGTACGGGATGGAGGAGATACTGGACGAGAGCGTGGAATGCGCGGTGAGACTTGGTTGCCTTGATGCGTCCAAGCTTAGTTTACAAGGATGATAATATCATCCTGATTAGTGCAATTTACCATCATTATTGTGTTGGTGTGCCTCTTCAGGCGTTCTAATTACTATACTTAAAATAAAAAGGAGCAATGGAGCATTCCTTGGCGTCATTGGTTTACAGTCGTGTACTCGTGTACTACCAGCAATCTGAAA             ]


>consensus_352#0 GTCTGAATCAAAATATCAGATACAGCCAATCAGCCATGCGTACCAATCTGCACACAGTGA GCGGCGGCTACCCGATCTGGTACTGGTAGTAGCAGGAACGACGATGGCGGAGGAGTCAGG GAGGAGGAGCGGCGGCGGCGTCAGGGTGTGCGTCACCGGCGGCGCTGGGTTCATCGGCTC GTGGCTCGTCAAGAAGCTCCTCGGCGCCGGCTACACCGTGCACGCCACCCTGCGAAGCAT AGGGGACGAGGTGAAGGTGGGCCTCCTGCGGCGGCTCGTCCCCGGCGACGCGCCGCCGGA GCGGCTGCGCCTGTTCGAGGCCGACCTCTACGACGCCGCCACCTTCGCTCCGGCCATCGC CGGCTGCCAGTTCGTCTTCCTCGTCGCCACGCCCTTCCTCCATGACGCCACCAGCACGAA GTACAATAACACGGCGGAGGCGGCGCTGGACGCGGCACGGGTGATCCTCCGGCAATGCGA GGAATCCAGCACGGTGAAGCGCGTCATCTACACGAGCTCCATGGCTGCGACCTCGCCGCT CAAGGAGGACTCCACCGGCTTCAAGGACTCCATCGACGAATCCTGCTGGACGCCGCTCGC CGTCGACTACCCTTACCGGAGCGCACGGTTCGATGAGTACATCCTGTCGAAGCTGCTGTC GGAGAAGGAGCTGCTGGGGCACAGCCACGCTGGCGAGAGGCGGAGGCCGGCGGTCGAGGT GGTGACGGTGCCGTGCTCCGTCGTCGCCGGCGGGACGCTGCAGGGGCAGTCGACGACGAG CCTGGACTGCGTCGTGTCGCCGGTGTCCCGGGACGAGGGCCGCTTCCGGGCGCTCAGGCT GCTGCAGAGGCTGATGGGGTCGGTGCCGATGGTGCACGTCGACGACGTCTGCGACGCGCT CGTCTTCTGCATGGAGCAGCCGTCCCTCACCGGCCGGTTCCTCTGCTCCGCCGCGTACCC GACTCTCGACGACATCGTCGAACACTTCGCCGGCAAGTACCCTCACCTCGACCTCCTCAA AGAAACGGAGACATTGCCGAGCATTCAAGCTCACACTGATAAGCTGGGGGAGCTGGGGTT CAAGTACAAGTACGGAATGGAGGAGATACTGGACGAGAGCGTGGAATGCGCGGTGAGACT TGGTTGCCTTGATGCGTCCAAGCTTAGTTTACAAGGATGATAATATCATCCTGATTAGTG CAATTTACCATCATTATTGTGTTGGTGTGCCTCTTCAGGCGTTCTAATTACTATACTTAA AATAAAAAGGAGCAATGGAGCATTCCTTGGCGTCATTGGTTTACAGTCGTGTACTCGTGT ACTACCAGCAATCTGAAATCTGAACTTCATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)